RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 POF1BQ8WVV4 589 aa11.77□□□□□ -0.53
POLR2J3-221ENST00000621093 AUTS2Q8WXX7 1259 aa11.77□□□□□ -0.53
POLR2J3-221ENST00000621093 HPDLQ96IR7 371 aa11.77□□□□□ -0.53
POLR2J3-221ENST00000621093 XYLT2Q9H1B5 865 aa11.77□□□□□ -0.53
POLR2J3-221ENST00000621093 RBSNQ9H1K0 784 aa11.77□□□□□ -0.53
POLR2J3-221ENST00000621093 PRDM12Q9H4Q4 367 aa11.77□□□□□ -0.53
POLR2J3-221ENST00000621093 LIMA1Q9UHB6 759 aaKnown RBP11.77□□□□□ -0.53
POLR2J3-221ENST00000621093 POLIQ9UNA4 740 aa11.77□□□□□ -0.53
POLR2J3-221ENST00000621093 NUB1Q9Y5A7 615 aa11.77□□□□□ -0.53
POLR2J3-221ENST00000621093 TIMM13Q9Y5L4 95 aaPredicted RBP11.77□□□□□ -0.53
POLR2J3-221ENST00000621093 KPNA7A9QM74 516 aa11.76□□□□□ -0.53
POLR2J3-221ENST00000621093 STX10O60499 249 aa11.76□□□□□ -0.53
POLR2J3-221ENST00000621093 CLSTN1O94985 981 aa11.76□□□□□ -0.53
POLR2J3-221ENST00000621093 CAVIN2O95810 425 aa11.76□□□□□ -0.53
POLR2J3-221ENST00000621093 TKTP29401 623 aaKnown RBP11.76□□□□□ -0.53
POLR2J3-221ENST00000621093 IRS1P35568 1242 aa11.76□□□□□ -0.53
POLR2J3-221ENST00000621093 PPM1AP35813 382 aa11.76□□□□□ -0.53
POLR2J3-221ENST00000621093 AARSP49588 968 aaKnown RBP eCLIP11.76□□□□□ -0.53
POLR2J3-221ENST00000621093 APBA1Q02410 837 aa11.76□□□□□ -0.53
POLR2J3-221ENST00000621093 PTPN21Q16825 1174 aa11.76□□□□□ -0.53
POLR2J3-221ENST00000621093 SV2CQ496J9 727 aa11.76□□□□□ -0.53
POLR2J3-221ENST00000621093 ZNF697Q5TEC3 545 aa11.76□□□□□ -0.53
POLR2J3-221ENST00000621093 FAM171A1Q5VUB5 890 aa11.76□□□□□ -0.53
POLR2J3-221ENST00000621093 DSTYKQ6XUX3 929 aa11.76□□□□□ -0.53
POLR2J3-221ENST00000621093 CEP57Q86XR8 500 aa11.76□□□□□ -0.53
POLR2J3-221ENST00000621093 VPS52Q8N1B4 723 aa11.76□□□□□ -0.53
POLR2J3-221ENST00000621093 LRRC52Q8N7C0 313 aa11.76□□□□□ -0.53
POLR2J3-221ENST00000621093 TATDN2Q93075 761 aa11.76□□□□□ -0.53
POLR2J3-221ENST00000621093 SUSD3Q96L08 255 aa11.76□□□□□ -0.53
POLR2J3-221ENST00000621093 SENP8Q96LD8 212 aa11.76□□□□□ -0.53
POLR2J3-221ENST00000621093 ZNF560Q96MR9 790 aa11.76□□□□□ -0.53
POLR2J3-221ENST00000621093 CRACR2AQ9BSW2 395 aa11.76□□□□□ -0.53
POLR2J3-221ENST00000621093 C11orf84Q9BUA3 381 aaPredicted RBP11.76□□□□□ -0.53
POLR2J3-221ENST00000621093 HERC2P3Q9BVR0 1158 aa11.76□□□□□ -0.53
POLR2J3-221ENST00000621093 NDST4Q9H3R1 872 aa11.76□□□□□ -0.53
POLR2J3-221ENST00000621093 APOBEC3GQ9HC16 384 aaKnown RBP11.76□□□□□ -0.53
POLR2J3-221ENST00000621093 RANBP2P49792 3224 aaKnown RBP11.76□□□□□ -0.53
POLR2J3-221ENST00000621093 GOLGA6L19H0YKK7 550 aa11.75□□□□□ -0.53
POLR2J3-221ENST00000621093 M0QZQ0 153 aa11.75□□□□□ -0.53
POLR2J3-221ENST00000621093 PES1O00541 588 aaKnown RBP11.75□□□□□ -0.53
POLR2J3-221ENST00000621093 C2CD2LO14523 706 aa11.75□□□□□ -0.53
POLR2J3-221ENST00000621093 CYB561D2O14569 222 aa11.75□□□□□ -0.53
POLR2J3-221ENST00000621093 HCRTO43612 131 aa11.75□□□□□ -0.53
POLR2J3-221ENST00000621093 ASS1P00966 412 aaKnown RBP11.75□□□□□ -0.53
POLR2J3-221ENST00000621093 SOD2P04179 222 aa11.75□□□□□ -0.53
POLR2J3-221ENST00000621093 RAP1GAPP47736 663 aa11.75□□□□□ -0.53
POLR2J3-221ENST00000621093 FXR1P51114 621 aaKnown RBP eCLIP11.75□□□□□ -0.53
POLR2J3-221ENST00000621093 KRT17Q04695 432 aa11.75□□□□□ -0.53
POLR2J3-221ENST00000621093 LRMPQ12912 555 aa11.75□□□□□ -0.53
POLR2J3-221ENST00000621093 ZNF699Q32M78 642 aa11.75□□□□□ -0.53
POLR2J3-221ENST00000621093 RTP2Q5QGT7 225 aa11.75□□□□□ -0.53
POLR2J3-221ENST00000621093 PLPP4Q5VZY2 271 aa11.75□□□□□ -0.53
POLR2J3-221ENST00000621093 PRSS55Q6UWB4 352 aaPredicted RBP11.75□□□□□ -0.53
POLR2J3-221ENST00000621093 SCARA5Q6ZMJ2 495 aa11.75□□□□□ -0.53
POLR2J3-221ENST00000621093 FBXL13Q8NEE6 735 aa11.75□□□□□ -0.53
POLR2J3-221ENST00000621093 LMO3Q8TAP4 145 aa11.75□□□□□ -0.53
POLR2J3-221ENST00000621093 ZBP1Q9H171 429 aa11.75□□□□□ -0.53
POLR2J3-221ENST00000621093 SDCBP2Q9H190 292 aa11.75□□□□□ -0.53
POLR2J3-221ENST00000621093 RAB20Q9NX57 234 aa11.75□□□□□ -0.53
POLR2J3-221ENST00000621093 NXF1Q9UBU9 619 aaKnown RBP11.75□□□□□ -0.53
POLR2J3-221ENST00000621093 PCDHB8Q9UN66 801 aa11.75□□□□□ -0.53
POLR2J3-221ENST00000621093 COQ4Q9Y3A0 265 aa11.75□□□□□ -0.53
POLR2J3-221ENST00000621093 R3HCC1Q9Y3T6 440 aaKnown RBP11.75□□□□□ -0.53
POLR2J3-221ENST00000621093 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.75□□□□□ -0.53
POLR2J3-221ENST00000621093 SNX9Q9Y5X1 595 aa11.75□□□□□ -0.53
POLR2J3-221ENST00000621093 SF3B1O75533 1304 aaKnown RBP eCLIP11.75□□□□□ -0.53
POLR2J3-221ENST00000621093 CHD9Q3L8U1 2897 aa11.74□□□□□ -0.53
POLR2J3-221ENST00000621093 MTCL1Q9Y4B5 1905 aaKnown RBP11.74□□□□□ -0.53
POLR2J3-221ENST00000621093 MYO7AQ13402 2215 aa11.74□□□□□ -0.53
POLR2J3-221ENST00000621093 TMEM265A0A087WTH1 108 aa11.74□□□□□ -0.53
POLR2J3-221ENST00000621093 FSCN2O14926 492 aa11.74□□□□□ -0.53
POLR2J3-221ENST00000621093 TEX33O43247 280 aa11.74□□□□□ -0.53
POLR2J3-221ENST00000621093 N4BP1O75113 896 aaKnown RBP11.74□□□□□ -0.53
POLR2J3-221ENST00000621093 RPL17P18621 184 aaKnown RBP11.74□□□□□ -0.53
POLR2J3-221ENST00000621093 SLC9A1P19634 815 aa11.74□□□□□ -0.53
POLR2J3-221ENST00000621093 FGFR3P22607 806 aa11.74□□□□□ -0.53
POLR2J3-221ENST00000621093 ATICP31939 592 aa11.74□□□□□ -0.53
POLR2J3-221ENST00000621093 CA8P35219 290 aa11.74□□□□□ -0.53
POLR2J3-221ENST00000621093 PNPLA4P41247 253 aa11.74□□□□□ -0.53
POLR2J3-221ENST00000621093 KLK7P49862 253 aa11.74□□□□□ -0.53
POLR2J3-221ENST00000621093 CDH8P55286 799 aa11.74□□□□□ -0.53
POLR2J3-221ENST00000621093 NOP14P78316 857 aaKnown RBP11.74□□□□□ -0.53
POLR2J3-221ENST00000621093 KCNMA1Q12791 1236 aa11.74□□□□□ -0.53
POLR2J3-221ENST00000621093 MYO1EQ12965 1108 aa11.74□□□□□ -0.53
POLR2J3-221ENST00000621093 ADGRE1Q14246 886 aa11.74□□□□□ -0.53
POLR2J3-221ENST00000621093 SOWAHAQ2M3V2 549 aa11.74□□□□□ -0.53
POLR2J3-221ENST00000621093 SGSM1Q2NKQ1 1148 aa11.74□□□□□ -0.53
POLR2J3-221ENST00000621093 WDR72Q3MJ13 1102 aa11.74□□□□□ -0.53
POLR2J3-221ENST00000621093 KIAA0319Q5VV43 1072 aa11.74□□□□□ -0.53
POLR2J3-221ENST00000621093 WSCD1Q658N2 575 aa11.74□□□□□ -0.53
POLR2J3-221ENST00000621093 OSTM1Q86WC4 334 aa11.74□□□□□ -0.53
POLR2J3-221ENST00000621093 ARHGEF19Q8IW93 802 aa11.74□□□□□ -0.53
POLR2J3-221ENST00000621093 EHBP1Q8NDI1 1231 aa11.74□□□□□ -0.53
POLR2J3-221ENST00000621093 RIN2Q8WYP3 895 aaPredicted RBP11.74□□□□□ -0.53
POLR2J3-221ENST00000621093 NAP1L5Q96NT1 182 aaPredicted RBP11.74□□□□□ -0.53
POLR2J3-221ENST00000621093 TCF25Q9BQ70 676 aa11.74□□□□□ -0.53
POLR2J3-221ENST00000621093 INTS2Q9H0H0 1204 aaKnown RBP11.74□□□□□ -0.53
POLR2J3-221ENST00000621093 SMYD3Q9H7B4 428 aa11.74□□□□□ -0.53
POLR2J3-221ENST00000621093 ENTPD7Q9NQZ7 604 aa11.74□□□□□ -0.53
POLR2J3-221ENST00000621093 TLR9Q9NR96 1032 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms