RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 UBE3CQ15386 1083 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 C11orf57Q6ZUT1 292 aaPredicted RBP7.5□□□□□ -1.21
COLCA1-205ENST00000620864 G2E3Q7L622 706 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 SUCLG2Q96I99 432 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 CASS4Q9NQ75 786 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 NARFQ9UHQ1 456 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 CRB1P82279 1406 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 GOLGA8SH3BPF8 625 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 PSTPIP1O43586 416 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 FAM200BP0CF97 657 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 MXD4Q14582 209 aaPredicted RBP7.5□□□□□ -1.21
COLCA1-205ENST00000620864 TIMM50Q3ZCQ8 353 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 CCDC137Q6PK04 289 aaKnown RBP7.5□□□□□ -1.21
COLCA1-205ENST00000620864 CCDC126Q96EE4 140 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 CYFIP2Q96F07 1278 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 SERHL2Q9H4I8 314 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 SERHLQ9NQF3 203 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 SEPT9Q9UHD8 586 aaPredicted RBP7.5□□□□□ -1.21
COLCA1-205ENST00000620864 ANAPC7Q9UJX3 599 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 PCDHB8Q9UN66 801 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 CLIC4Q9Y696 253 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 STMND1H3BQB6 276 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 CBFA2T3O75081 653 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 PUDPQ08623 228 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 NSUN2Q08J23 767 aaKnown RBP eCLIP7.5□□□□□ -1.21
COLCA1-205ENST00000620864 FAPQ12884 760 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 DGUOKQ16854 277 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 HABP4Q5JVS0 413 aaKnown RBP7.5□□□□□ -1.21
COLCA1-205ENST00000620864 E4F1Q66K89 784 aaPredicted RBP7.5□□□□□ -1.21
COLCA1-205ENST00000620864 PPM1NQ8N819 430 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 MDM1Q8TC05 714 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 CNDP1Q96KN2 507 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 MTA3Q9BTC8 594 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 ING3Q9NXR8 418 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 ADAM22Q9P0K1 906 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 VPS9D1Q9Y2B5 631 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 JAK1P23458 1154 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 BCAP31P51572 246 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 ATN1P54259 1190 aaPredicted RBP7.5□□□□□ -1.21
COLCA1-205ENST00000620864 ITGB3BPQ13352 177 aaPredicted RBP7.5□□□□□ -1.21
COLCA1-205ENST00000620864 TUBA3CQ13748 450 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 TRMT5Q32P41 509 aaKnown RBP7.5□□□□□ -1.21
COLCA1-205ENST00000620864 OR6B2Q6IFH4 312 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 LCORLQ8N3X6 602 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 GLMNQ92990 594 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 SLC4A9Q96Q91 983 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 AIPL1Q9NZN9 384 aa7.5□□□□□ -1.21
COLCA1-205ENST00000620864 LRRN2O75325 713 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 TNFAIP8O95379 198 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 WARSP23381 471 aaKnown RBP7.49□□□□□ -1.21
COLCA1-205ENST00000620864 NNMTP40261 264 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 ARL4DP49703 201 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 CTDSPL2Q05D32 466 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 PDIA2Q13087 525 aaKnown RBP7.49□□□□□ -1.21
COLCA1-205ENST00000620864 ZNF827Q17R98 1081 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 PLEKHA7Q6IQ23 1121 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 CYB5D1Q6P9G0 228 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 YIPF2Q9BWQ6 316 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 MYLK2Q9H1R3 596 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 MMADHCQ9H3L0 296 aaPredicted RBP7.49□□□□□ -1.21
COLCA1-205ENST00000620864 GPR108Q9NPR9 543 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 NMRK1Q9NWW6 199 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 SPATA2Q9UM82 520 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 VIRMAQ69YN4 1812 aaKnown RBP7.49□□□□□ -1.21
COLCA1-205ENST00000620864 RGS5O15539 181 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 SYNCRIPO60506 623 aaKnown RBP7.49□□□□□ -1.21
COLCA1-205ENST00000620864 MMP1P03956 469 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 MLH1P40692 756 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 RCAN1P53805 252 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 KDSRQ06136 332 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 FASTKD1Q53R41 847 aaKnown RBP7.49□□□□□ -1.21
COLCA1-205ENST00000620864 RSBN1Q5VWQ0 802 aaPredicted RBP7.49□□□□□ -1.21
COLCA1-205ENST00000620864 PKN3Q6P5Z2 889 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 PRR23BQ6ZRT6 265 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 CCDC60Q8IWA6 550 aaPredicted RBP7.49□□□□□ -1.21
COLCA1-205ENST00000620864 ZSCAN1Q8NBB4 408 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 DBNDD2Q9BQY9 259 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 RRM2P31350 389 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 FNTAP49354 379 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 ALDH18A1P54886 795 aaKnown RBP7.49□□□□□ -1.21
COLCA1-205ENST00000620864 KCNK10P57789 538 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 GPS1Q13098 491 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 MAPRE1Q15691 268 aaKnown RBP7.49□□□□□ -1.21
COLCA1-205ENST00000620864 SPANXN2Q5MJ10 180 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 PDZK1Q5T2W1 519 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 MZT2BQ6NZ67 158 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 NEK10Q6ZWH5 1172 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 LRRC8DQ7L1W4 858 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 NSUN7Q8NE18 718 aaKnown RBP7.49□□□□□ -1.21
COLCA1-205ENST00000620864 STKLD1Q8NE28 680 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 RFFLQ8WZ73 363 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 STAP2Q9UGK3 403 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 INPP5FQ9Y2H2 1132 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 LRCH1Q9Y2L9 728 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 TMEM88BA6NKF7 163 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 IFNA14P01570 189 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 GNAT1P11488 350 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 COL15A1P39059 1388 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 PLA2G4AP47712 749 aa7.49□□□□□ -1.21
COLCA1-205ENST00000620864 CAPZA2P47755 286 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms