RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 LRRC63Q05C16 580 aa19.73■□□□□ 0.75
LITAF-220ENST00000620789 LEXMQ3ZCV2 418 aa19.73■□□□□ 0.75
LITAF-220ENST00000620789 VARS2Q5ST30 1063 aaKnown RBP19.73■□□□□ 0.75
LITAF-220ENST00000620789 DSTYKQ6XUX3 929 aa19.73■□□□□ 0.75
LITAF-220ENST00000620789 CSGALNACT2Q8N6G5 542 aa19.73■□□□□ 0.75
LITAF-220ENST00000620789 PLEKHO2Q8TD55 490 aa19.73■□□□□ 0.75
LITAF-220ENST00000620789 PARD3BQ8TEW8 1205 aa19.73■□□□□ 0.75
LITAF-220ENST00000620789 DHTKD1Q96HY7 919 aaPredicted RBP19.73■□□□□ 0.75
LITAF-220ENST00000620789 MSLNLQ96KJ4 702 aa19.73■□□□□ 0.75
LITAF-220ENST00000620789 ZNF560Q96MR9 790 aa19.73■□□□□ 0.75
LITAF-220ENST00000620789 POP1Q99575 1024 aaKnown RBP19.73■□□□□ 0.75
LITAF-220ENST00000620789 CLSTN3Q9BQT9 956 aa19.73■□□□□ 0.75
LITAF-220ENST00000620789 SIX4Q9UIU6 781 aa19.73■□□□□ 0.75
LITAF-220ENST00000620789 AGAP1Q9UPQ3 857 aa19.73■□□□□ 0.75
LITAF-220ENST00000620789 BACE2Q9Y5Z0 518 aa19.73■□□□□ 0.75
LITAF-220ENST00000620789 PPP1R3GB7ZBB8 358 aa19.72■□□□□ 0.75
LITAF-220ENST00000620789 AKAP3O75969 853 aa19.72■□□□□ 0.75
LITAF-220ENST00000620789 KRT19P08727 400 aa19.72■□□□□ 0.75
LITAF-220ENST00000620789 CCNE1P24864 410 aa19.72■□□□□ 0.75
LITAF-220ENST00000620789 SCN1AP35498 2009 aa19.72■□□□□ 0.75
LITAF-220ENST00000620789 PSMC2P35998 433 aaKnown RBP19.72■□□□□ 0.75
LITAF-220ENST00000620789 PMS1P54277 932 aaKnown RBP19.72■□□□□ 0.75
LITAF-220ENST00000620789 RBP5P82980 135 aa19.72■□□□□ 0.75
LITAF-220ENST00000620789 MRPL58Q14197 206 aaKnown RBP19.72■□□□□ 0.75
LITAF-220ENST00000620789 SV2CQ496J9 727 aa19.72■□□□□ 0.75
LITAF-220ENST00000620789 ANKRD40Q6AI12 368 aa19.72■□□□□ 0.75
LITAF-220ENST00000620789 ANKRD54Q6NXT1 300 aa19.72■□□□□ 0.75
LITAF-220ENST00000620789 GLYCTKQ8IVS8 523 aa19.72■□□□□ 0.75
LITAF-220ENST00000620789 LRRC52Q8N7C0 313 aa19.72■□□□□ 0.75
LITAF-220ENST00000620789 SENP8Q96LD8 212 aa19.72■□□□□ 0.75
LITAF-220ENST00000620789 PLXNA3P51805 1871 aa19.71■□□□□ 0.75
LITAF-220ENST00000620789 TRIM49BA6NDI0 452 aa19.71■□□□□ 0.75
LITAF-220ENST00000620789 LRRIQ3A6PVS8 624 aaPredicted RBP19.71■□□□□ 0.75
LITAF-220ENST00000620789 KPNA7A9QM74 516 aa19.71■□□□□ 0.75
LITAF-220ENST00000620789 H7C4K7 107 aa19.71■□□□□ 0.75
LITAF-220ENST00000620789 CETN3O15182 167 aa19.71■□□□□ 0.75
LITAF-220ENST00000620789 GLUD1P00367 558 aa19.71■□□□□ 0.75
LITAF-220ENST00000620789 C1RP00736 705 aa19.71■□□□□ 0.75
LITAF-220ENST00000620789 ODC1P11926 461 aa19.71■□□□□ 0.75
LITAF-220ENST00000620789 CLDN10P78369 228 aa19.71■□□□□ 0.75
LITAF-220ENST00000620789 SCARA3Q6AZY7 606 aa19.71■□□□□ 0.75
LITAF-220ENST00000620789 TRAPPC11Q7Z392 1133 aa19.71■□□□□ 0.75
LITAF-220ENST00000620789 FAM186BQ8IYM0 893 aa19.71■□□□□ 0.75
LITAF-220ENST00000620789 TMC2Q8TDI7 906 aa19.71■□□□□ 0.75
LITAF-220ENST00000620789 ZNF516Q92618 1163 aa19.71■□□□□ 0.75
LITAF-220ENST00000620789 BORCS6Q96GS4 357 aa19.71■□□□□ 0.75
LITAF-220ENST00000620789 ASB2Q96Q27 587 aa19.71■□□□□ 0.75
LITAF-220ENST00000620789 MKNK1Q9BUB5 465 aa19.71■□□□□ 0.75
LITAF-220ENST00000620789 DZANK1Q9NVP4 752 aa19.71■□□□□ 0.75
LITAF-220ENST00000620789 CD207Q9UJ71 328 aa19.71■□□□□ 0.75
LITAF-220ENST00000620789 R3HCC1Q9Y3T6 440 aaKnown RBP19.71■□□□□ 0.75
LITAF-220ENST00000620789 TIMM13Q9Y5L4 95 aaPredicted RBP19.71■□□□□ 0.75
LITAF-220ENST00000620789 CDY1Q9Y6F8 540 aa19.71■□□□□ 0.75
LITAF-220ENST00000620789 ARHGEF37A1IGU5 675 aa19.7■□□□□ 0.74
LITAF-220ENST00000620789 ADAM12O43184 909 aa19.7■□□□□ 0.74
LITAF-220ENST00000620789 TBC1D4O60343 1298 aa19.7■□□□□ 0.74
LITAF-220ENST00000620789 HOXB8P17481 243 aaPredicted RBP19.7■□□□□ 0.74
LITAF-220ENST00000620789 TYMPP19971 482 aa19.7■□□□□ 0.74
LITAF-220ENST00000620789 KCNQ1P51787 676 aa19.7■□□□□ 0.74
LITAF-220ENST00000620789 AP3M2P53677 418 aa19.7■□□□□ 0.74
LITAF-220ENST00000620789 DLG4P78352 724 aa19.7■□□□□ 0.74
LITAF-220ENST00000620789 FKBP3Q00688 224 aaKnown RBP19.7■□□□□ 0.74
LITAF-220ENST00000620789 YWHAHQ04917 246 aaPredicted RBP19.7■□□□□ 0.74
LITAF-220ENST00000620789 CLUL1Q15846 466 aa19.7■□□□□ 0.74
LITAF-220ENST00000620789 KLHL10Q6JEL2 608 aa19.7■□□□□ 0.74
LITAF-220ENST00000620789 ZNF280DQ6N043 979 aa19.7■□□□□ 0.74
LITAF-220ENST00000620789 RSPO2Q6UXX9 243 aaPredicted RBP19.7■□□□□ 0.74
LITAF-220ENST00000620789 INTS8Q75QN2 995 aaKnown RBP19.7■□□□□ 0.74
LITAF-220ENST00000620789 USP37Q86T82 979 aa19.7■□□□□ 0.74
LITAF-220ENST00000620789 PALB2Q86YC2 1186 aa19.7■□□□□ 0.74
LITAF-220ENST00000620789 ZC3H3Q8IXZ2 948 aaKnown RBP19.7■□□□□ 0.74
LITAF-220ENST00000620789 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.7■□□□□ 0.74
LITAF-220ENST00000620789 EEF2KMTQ96G04 330 aa19.7■□□□□ 0.74
LITAF-220ENST00000620789 TSC2P49815 1807 aa19.69■□□□□ 0.74
LITAF-220ENST00000620789 CYB561D2O14569 222 aa19.69■□□□□ 0.74
LITAF-220ENST00000620789 TGM5O43548 720 aa19.69■□□□□ 0.74
LITAF-220ENST00000620789 OAZ2O95190 189 aa19.69■□□□□ 0.74
LITAF-220ENST00000620789 MBD3O95983 291 aa19.69■□□□□ 0.74
LITAF-220ENST00000620789 CYP11A1P05108 521 aa19.69■□□□□ 0.74
LITAF-220ENST00000620789 OR1D2P34982 312 aa19.69■□□□□ 0.74
LITAF-220ENST00000620789 VAMP7P51809 220 aa19.69■□□□□ 0.74
LITAF-220ENST00000620789 ENPEPQ07075 957 aa19.69■□□□□ 0.74
LITAF-220ENST00000620789 BFSP1Q12934 665 aa19.69■□□□□ 0.74
LITAF-220ENST00000620789 MYO1EQ12965 1108 aa19.69■□□□□ 0.74
LITAF-220ENST00000620789 RAB33AQ14088 237 aa19.69■□□□□ 0.74
LITAF-220ENST00000620789 PUS10Q3MIT2 529 aaKnown RBP19.69■□□□□ 0.74
LITAF-220ENST00000620789 CTXN3Q4LDR2 81 aa19.69■□□□□ 0.74
LITAF-220ENST00000620789 SLC8B1Q6J4K2 584 aa19.69■□□□□ 0.74
LITAF-220ENST00000620789 LILRA6Q6PI73 481 aa19.69■□□□□ 0.74
LITAF-220ENST00000620789 SYCE2Q6PIF2 218 aa19.69■□□□□ 0.74
LITAF-220ENST00000620789 FOXR2Q6PJQ5 311 aa19.69■□□□□ 0.74
LITAF-220ENST00000620789 SMRP1Q8NCR6 262 aa19.69■□□□□ 0.74
LITAF-220ENST00000620789 NELFBQ8WX92 580 aa19.69■□□□□ 0.74
LITAF-220ENST00000620789 MAN1C1Q9NR34 630 aa19.69■□□□□ 0.74
LITAF-220ENST00000620789 DPP7Q9UHL4 492 aa19.69■□□□□ 0.74
LITAF-220ENST00000620789 FBXL5Q9UKA1 691 aa19.69■□□□□ 0.74
LITAF-220ENST00000620789 CTNND2Q9UQB3 1225 aa19.69■□□□□ 0.74
LITAF-220ENST00000620789 BICDL2A1A5D9 508 aa19.68■□□□□ 0.74
LITAF-220ENST00000620789 IKBKBO14920 756 aa19.68■□□□□ 0.74
LITAF-220ENST00000620789 SLC16A3O15427 465 aaKnown RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms