RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 PJA2O43164 708 aa17.98■□□□□ 0.47
TRAPPC3-210ENST00000617904 PLEKP08567 350 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC3-210ENST00000617904 H2AFZP0C0S5 128 aa17.98■□□□□ 0.47
TRAPPC3-210ENST00000617904 CXCL8P10145 99 aa17.98■□□□□ 0.47
TRAPPC3-210ENST00000617904 ATF7P17544 494 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC3-210ENST00000617904 NOP14P78316 857 aaKnown RBP17.98■□□□□ 0.47
TRAPPC3-210ENST00000617904 GFPT1Q06210 699 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC3-210ENST00000617904 MYO1EQ12965 1108 aa17.98■□□□□ 0.47
TRAPPC3-210ENST00000617904 CUL2Q13617 745 aa17.98■□□□□ 0.47
TRAPPC3-210ENST00000617904 ASTE1Q2TB18 679 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC3-210ENST00000617904 ZNF699Q32M78 642 aa17.98■□□□□ 0.47
TRAPPC3-210ENST00000617904 LMBRD2Q68DH5 695 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC3-210ENST00000617904 GDF6Q6KF10 455 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC3-210ENST00000617904 H2AFVQ71UI9 128 aa17.98■□□□□ 0.47
TRAPPC3-210ENST00000617904 FAM71AQ8IYT1 594 aa17.98■□□□□ 0.47
TRAPPC3-210ENST00000617904 BEST2Q8NFU1 509 aa17.98■□□□□ 0.47
TRAPPC3-210ENST00000617904 HELQQ8TDG4 1101 aa17.98■□□□□ 0.47
TRAPPC3-210ENST00000617904 PPP1R13LQ8WUF5 828 aa17.98■□□□□ 0.47
TRAPPC3-210ENST00000617904 NOX5Q96PH1 765 aa17.98■□□□□ 0.47
TRAPPC3-210ENST00000617904 AGPAT1Q99943 283 aa17.98■□□□□ 0.47
TRAPPC3-210ENST00000617904 MTMR12Q9C0I1 747 aa17.98■□□□□ 0.47
TRAPPC3-210ENST00000617904 NIF3L1Q9GZT8 377 aa17.98■□□□□ 0.47
TRAPPC3-210ENST00000617904 CDY2AQ9Y6F7 541 aa17.98■□□□□ 0.47
TRAPPC3-210ENST00000617904 LACTBL1A8MY62 500 aa17.98■□□□□ 0.47
TRAPPC3-210ENST00000617904 CSDE1O75534 798 aaKnown RBP17.98■□□□□ 0.47
TRAPPC3-210ENST00000617904 KRT19P08727 400 aa17.98■□□□□ 0.47
TRAPPC3-210ENST00000617904 SKIP12755 728 aa17.98■□□□□ 0.47
TRAPPC3-210ENST00000617904 RABGGTBP53611 331 aa17.98■□□□□ 0.47
TRAPPC3-210ENST00000617904 RBP5P82980 135 aa17.98■□□□□ 0.47
TRAPPC3-210ENST00000617904 ZNF200P98182 395 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC3-210ENST00000617904 CYP27A1Q02318 531 aa17.98■□□□□ 0.47
TRAPPC3-210ENST00000617904 ZNF667Q5HYK9 610 aa17.98■□□□□ 0.47
TRAPPC3-210ENST00000617904 TWF2Q6IBS0 349 aaKnown RBP17.98■□□□□ 0.47
TRAPPC3-210ENST00000617904 ZNF571Q7Z3V5 609 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC3-210ENST00000617904 CDR2LQ86X02 465 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC3-210ENST00000617904 UBE2Q2Q8WVN8 375 aa17.98■□□□□ 0.47
TRAPPC3-210ENST00000617904 CTNNBL1Q8WYA6 563 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC3-210ENST00000617904 PCDHB2Q9Y5E7 798 aa17.98■□□□□ 0.47
TRAPPC3-210ENST00000617904 SLC4A7Q9Y6M7 1214 aa17.98■□□□□ 0.47
TRAPPC3-210ENST00000617904 SQORQ9Y6N5 450 aa17.98■□□□□ 0.47
TRAPPC3-210ENST00000617904 ASS1P00966 412 aaKnown RBP17.97■□□□□ 0.47
TRAPPC3-210ENST00000617904 RAB27AP51159 221 aa17.97■□□□□ 0.47
TRAPPC3-210ENST00000617904 JADE1Q6IE81 842 aa17.97■□□□□ 0.47
TRAPPC3-210ENST00000617904 TRIM72Q6ZMU5 477 aa17.97■□□□□ 0.47
TRAPPC3-210ENST00000617904 OR5B17Q8NGF7 314 aa17.97■□□□□ 0.47
TRAPPC3-210ENST00000617904 PPM1EQ8WY54 764 aa17.97■□□□□ 0.47
TRAPPC3-210ENST00000617904 NAPGQ99747 312 aaPredicted RBP17.97■□□□□ 0.47
TRAPPC3-210ENST00000617904 SLC28A3Q9HAS3 691 aa17.97■□□□□ 0.47
TRAPPC3-210ENST00000617904 NAGPAQ9UK23 515 aa17.97■□□□□ 0.47
TRAPPC3-210ENST00000617904 PCDHB4Q9Y5E5 795 aa17.97■□□□□ 0.47
TRAPPC3-210ENST00000617904 SPTBN5Q9NRC6 3674 aaKnown RBP17.96■□□□□ 0.47
TRAPPC3-210ENST00000617904 SCN5AQ14524 2016 aa17.96■□□□□ 0.47
TRAPPC3-210ENST00000617904 A0A087X0T9 212 aa17.96■□□□□ 0.46
TRAPPC3-210ENST00000617904 BTNL10A8MVZ5 291 aa17.96■□□□□ 0.46
TRAPPC3-210ENST00000617904 PFKMP08237 780 aa17.96■□□□□ 0.46
TRAPPC3-210ENST00000617904 FAM228BP0C875 321 aa17.96■□□□□ 0.46
TRAPPC3-210ENST00000617904 MYOGP15173 224 aa17.96■□□□□ 0.46
TRAPPC3-210ENST00000617904 FGFR4P22455 802 aa17.96■□□□□ 0.46
TRAPPC3-210ENST00000617904 THPOP40225 353 aa17.96■□□□□ 0.46
TRAPPC3-210ENST00000617904 TJAP1Q5JTD0 557 aa17.96■□□□□ 0.46
TRAPPC3-210ENST00000617904 DEFB128Q7Z7B8 93 aa17.96■□□□□ 0.46
TRAPPC3-210ENST00000617904 TRIM11Q96F44 468 aa17.96■□□□□ 0.46
TRAPPC3-210ENST00000617904 KIF12Q96FN5 646 aa17.96■□□□□ 0.46
TRAPPC3-210ENST00000617904 UBQLN1Q9UMX0 589 aaKnown RBP17.96■□□□□ 0.46
TRAPPC3-210ENST00000617904 PCDHA11Q9Y5I1 949 aa17.96■□□□□ 0.46
TRAPPC3-210ENST00000617904 ZBBXA8MT70 800 aa17.95■□□□□ 0.46
TRAPPC3-210ENST00000617904 URI1O94763 535 aaPredicted RBP17.95■□□□□ 0.46
TRAPPC3-210ENST00000617904 VNN1O95497 513 aa17.95■□□□□ 0.46
TRAPPC3-210ENST00000617904 HOXA11P31270 313 aaPredicted RBP17.95■□□□□ 0.46
TRAPPC3-210ENST00000617904 PAK2Q13177 524 aa17.95■□□□□ 0.46
TRAPPC3-210ENST00000617904 SLC10A6Q3KNW5 377 aa17.95■□□□□ 0.46
TRAPPC3-210ENST00000617904 CEP120Q8N960 986 aa17.95■□□□□ 0.46
TRAPPC3-210ENST00000617904 TATDN2Q93075 761 aa17.95■□□□□ 0.46
TRAPPC3-210ENST00000617904 KREMEN1Q96MU8 473 aa17.95■□□□□ 0.46
TRAPPC3-210ENST00000617904 PI4K2AQ9BTU6 479 aa17.95■□□□□ 0.46
TRAPPC3-210ENST00000617904 CYP3A43Q9HB55 503 aa17.95■□□□□ 0.46
TRAPPC3-210ENST00000617904 DPP3Q9NY33 737 aa17.95■□□□□ 0.46
TRAPPC3-210ENST00000617904 PARP2Q9UGN5 583 aa17.95■□□□□ 0.46
TRAPPC3-210ENST00000617904 AJAP1Q9UKB5 411 aaPredicted RBP17.95■□□□□ 0.46
TRAPPC3-210ENST00000617904 REXO2Q9Y3B8 237 aaKnown RBP17.95■□□□□ 0.46
TRAPPC3-210ENST00000617904 CEP83Q9Y592 693 aa17.95■□□□□ 0.46
TRAPPC3-210ENST00000617904 ANO9A1A5B4 782 aa17.94■□□□□ 0.46
TRAPPC3-210ENST00000617904 CYP26A1O43174 497 aa17.94■□□□□ 0.46
TRAPPC3-210ENST00000617904 RTN2O75298 545 aa17.94■□□□□ 0.46
TRAPPC3-210ENST00000617904 STAU1O95793 577 aaKnown RBP17.94■□□□□ 0.46
TRAPPC3-210ENST00000617904 GZMAP12544 262 aa17.94■□□□□ 0.46
TRAPPC3-210ENST00000617904 ATP2A2P16615 1042 aaKnown RBP17.94■□□□□ 0.46
TRAPPC3-210ENST00000617904 IGFBP4P22692 258 aa17.94■□□□□ 0.46
TRAPPC3-210ENST00000617904 PNPLA4P41247 253 aa17.94■□□□□ 0.46
TRAPPC3-210ENST00000617904 ARHGAP25P42331 645 aa17.94■□□□□ 0.46
TRAPPC3-210ENST00000617904 MYL6P60660 151 aa17.94■□□□□ 0.46
TRAPPC3-210ENST00000617904 TNNC1P63316 161 aa17.94■□□□□ 0.46
TRAPPC3-210ENST00000617904 TUBB4BP68371 445 aa17.94■□□□□ 0.46
TRAPPC3-210ENST00000617904 CDR2Q01850 454 aa17.94■□□□□ 0.46
TRAPPC3-210ENST00000617904 NFX1Q12986 1120 aaKnown RBP17.94■□□□□ 0.46
TRAPPC3-210ENST00000617904 GLYCTKQ8IVS8 523 aa17.94■□□□□ 0.46
TRAPPC3-210ENST00000617904 SYCE1Q8N0S2 351 aa17.94■□□□□ 0.46
TRAPPC3-210ENST00000617904 PGBD4Q96DM1 585 aa17.94■□□□□ 0.46
TRAPPC3-210ENST00000617904 SNX27Q96L92 541 aa17.94■□□□□ 0.46
TRAPPC3-210ENST00000617904 ZNF560Q96MR9 790 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms