RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 AVENQ9NQS1 362 aaPredicted RBP18.5■□□□□ 0.55
PCDHGC3-205ENST00000617641 GJD2Q9UKL4 321 aa18.5■□□□□ 0.55
PCDHGC3-205ENST00000617641 MROH7Q68CQ1 1323 aa18.5■□□□□ 0.55
PCDHGC3-205ENST00000617641 A0A1B0GUA9 196 aa18.5■□□□□ 0.55
PCDHGC3-205ENST00000617641 MYBL1P10243 752 aa18.5■□□□□ 0.55
PCDHGC3-205ENST00000617641 BRD2P25440 801 aaKnown RBP18.5■□□□□ 0.55
PCDHGC3-205ENST00000617641 BEX3Q00994 111 aa18.5■□□□□ 0.55
PCDHGC3-205ENST00000617641 CRHR2Q13324 411 aa18.5■□□□□ 0.55
PCDHGC3-205ENST00000617641 IRF5Q13568 498 aa18.5■□□□□ 0.55
PCDHGC3-205ENST00000617641 HIC1Q14526 733 aa18.5■□□□□ 0.55
PCDHGC3-205ENST00000617641 RUFY4Q6ZNE9 571 aa18.5■□□□□ 0.55
PCDHGC3-205ENST00000617641 ADAT2Q7Z6V5 191 aaKnown RBP18.5■□□□□ 0.55
PCDHGC3-205ENST00000617641 TRIM11Q96F44 468 aa18.5■□□□□ 0.55
PCDHGC3-205ENST00000617641 WNT8AQ9H1J5 351 aa18.5■□□□□ 0.55
PCDHGC3-205ENST00000617641 CDHR5Q9HBB8 845 aa18.5■□□□□ 0.55
PCDHGC3-205ENST00000617641 ZFYVE28Q9HCC9 887 aa18.5■□□□□ 0.55
PCDHGC3-205ENST00000617641 GDF3Q9NR23 364 aa18.5■□□□□ 0.55
PCDHGC3-205ENST00000617641 NR2E1Q9Y466 385 aa18.5■□□□□ 0.55
PCDHGC3-205ENST00000617641 NRCAMQ92823 1304 aa18.5■□□□□ 0.55
PCDHGC3-205ENST00000617641 TNPO2O14787 897 aaKnown RBP18.49■□□□□ 0.55
PCDHGC3-205ENST00000617641 ITGB3P05106 788 aa18.49■□□□□ 0.55
PCDHGC3-205ENST00000617641 RAP1GAPP47736 663 aa18.49■□□□□ 0.55
PCDHGC3-205ENST00000617641 PEX5P50542 639 aa18.49■□□□□ 0.55
PCDHGC3-205ENST00000617641 APBA2Q99767 749 aa18.49■□□□□ 0.55
PCDHGC3-205ENST00000617641 ADAM22Q9P0K1 906 aa18.49■□□□□ 0.55
PCDHGC3-205ENST00000617641 FAM155AB1AL88 458 aaPredicted RBP18.49■□□□□ 0.55
PCDHGC3-205ENST00000617641 CCDC188H7C350 402 aa18.49■□□□□ 0.55
PCDHGC3-205ENST00000617641 SART1O43290 800 aaKnown RBP18.49■□□□□ 0.55
PCDHGC3-205ENST00000617641 GPR32O75388 356 aa18.49■□□□□ 0.55
PCDHGC3-205ENST00000617641 MYL3P08590 195 aa18.49■□□□□ 0.55
PCDHGC3-205ENST00000617641 CYP2C9P11712 490 aa18.49■□□□□ 0.55
PCDHGC3-205ENST00000617641 TNFRSF8P28908 595 aa18.49■□□□□ 0.55
PCDHGC3-205ENST00000617641 GUCY2FP51841 1108 aa18.49■□□□□ 0.55
PCDHGC3-205ENST00000617641 MMS22LQ6ZRQ5 1243 aa18.49■□□□□ 0.55
PCDHGC3-205ENST00000617641 IFT20Q8IY31 132 aa18.49■□□□□ 0.55
PCDHGC3-205ENST00000617641 ADPGKQ9BRR6 497 aa18.49■□□□□ 0.55
PCDHGC3-205ENST00000617641 ASB7Q9H672 318 aa18.49■□□□□ 0.55
PCDHGC3-205ENST00000617641 CTGFP29279 349 aa18.48■□□□□ 0.55
PCDHGC3-205ENST00000617641 CARSP49589 748 aaKnown RBP18.48■□□□□ 0.55
PCDHGC3-205ENST00000617641 PSEN2P49810 448 aa18.48■□□□□ 0.55
PCDHGC3-205ENST00000617641 KCTD19Q17RG1 926 aaPredicted RBP18.48■□□□□ 0.55
PCDHGC3-205ENST00000617641 WDR72Q3MJ13 1102 aa18.48■□□□□ 0.55
PCDHGC3-205ENST00000617641 ZNF667Q5HYK9 610 aa18.48■□□□□ 0.55
PCDHGC3-205ENST00000617641 PHF13Q86YI8 300 aaPredicted RBP18.48■□□□□ 0.55
PCDHGC3-205ENST00000617641 CXorf38Q8TB03 319 aa18.48■□□□□ 0.55
PCDHGC3-205ENST00000617641 OSMRQ99650 979 aa18.48■□□□□ 0.55
PCDHGC3-205ENST00000617641 MBLAC1A4D2B0 266 aaPredicted RBP18.48■□□□□ 0.55
PCDHGC3-205ENST00000617641 CTNNA1P35221 906 aaKnown RBP18.48■□□□□ 0.55
PCDHGC3-205ENST00000617641 INHBEP58166 350 aa18.48■□□□□ 0.55
PCDHGC3-205ENST00000617641 TMEM132DQ14C87 1099 aa18.48■□□□□ 0.55
PCDHGC3-205ENST00000617641 TRADDQ15628 312 aa18.48■□□□□ 0.55
PCDHGC3-205ENST00000617641 KYAT1Q16773 422 aa18.48■□□□□ 0.55
PCDHGC3-205ENST00000617641 LIN9Q5TKA1 542 aa18.48■□□□□ 0.55
PCDHGC3-205ENST00000617641 CASKIN2Q8WXE0 1202 aa18.48■□□□□ 0.55
PCDHGC3-205ENST00000617641 SOCS4Q8WXH5 440 aa18.48■□□□□ 0.55
PCDHGC3-205ENST00000617641 IFT81Q8WYA0 676 aa18.48■□□□□ 0.55
PCDHGC3-205ENST00000617641 TFAP2BQ92481 460 aa18.48■□□□□ 0.55
PCDHGC3-205ENST00000617641 ACAP3Q96P50 834 aa18.48■□□□□ 0.55
PCDHGC3-205ENST00000617641 GCOM2Q9BZD3 368 aaPredicted RBP18.48■□□□□ 0.55
PCDHGC3-205ENST00000617641 AP5M1Q9H0R1 490 aa18.48■□□□□ 0.55
PCDHGC3-205ENST00000617641 H3BQF6 201 aa18.47■□□□□ 0.55
PCDHGC3-205ENST00000617641 NPTXRO95502 500 aa18.47■□□□□ 0.55
PCDHGC3-205ENST00000617641 CTNNA2P26232 953 aa18.47■□□□□ 0.55
PCDHGC3-205ENST00000617641 OAS2P29728 719 aaKnown RBP18.47■□□□□ 0.55
PCDHGC3-205ENST00000617641 CPT1AP50416 773 aa18.47■□□□□ 0.55
PCDHGC3-205ENST00000617641 CDH8P55286 799 aa18.47■□□□□ 0.55
PCDHGC3-205ENST00000617641 ZNF200P98182 395 aaPredicted RBP18.47■□□□□ 0.55
PCDHGC3-205ENST00000617641 POU5F1Q01860 360 aaKnown RBP18.47■□□□□ 0.55
PCDHGC3-205ENST00000617641 PTP4A2Q12974 167 aa18.47■□□□□ 0.55
PCDHGC3-205ENST00000617641 SND1Q7KZF4 910 aaKnown RBP eCLIP18.47■□□□□ 0.55
PCDHGC3-205ENST00000617641 CATSPER4Q7RTX7 472 aa18.47■□□□□ 0.55
PCDHGC3-205ENST00000617641 ZIC5Q96T25 663 aa18.47■□□□□ 0.55
PCDHGC3-205ENST00000617641 SDCBP2Q9H190 292 aa18.47■□□□□ 0.55
PCDHGC3-205ENST00000617641 AMACRQ9UHK6 382 aa18.47■□□□□ 0.55
PCDHGC3-205ENST00000617641 PCDHA3Q9Y5H8 950 aa18.47■□□□□ 0.55
PCDHGC3-205ENST00000617641 SMIM35A0A1B0GVV1 85 aa18.46■□□□□ 0.55
PCDHGC3-205ENST00000617641 HOXA11P31270 313 aaPredicted RBP18.46■□□□□ 0.55
PCDHGC3-205ENST00000617641 EPHB4P54760 987 aa18.46■□□□□ 0.55
PCDHGC3-205ENST00000617641 DNAJB3Q8WWF6 145 aa18.46■□□□□ 0.55
PCDHGC3-205ENST00000617641 NAP1L3Q99457 506 aaPredicted RBP18.46■□□□□ 0.55
PCDHGC3-205ENST00000617641 BCO2Q9BYV7 579 aa18.46■□□□□ 0.55
PCDHGC3-205ENST00000617641 SMYD3Q9H7B4 428 aa18.46■□□□□ 0.55
PCDHGC3-205ENST00000617641 ERVK-5Q9HDB9 667 aa18.46■□□□□ 0.55
PCDHGC3-205ENST00000617641 HPCAL4Q9UM19 191 aa18.46■□□□□ 0.55
PCDHGC3-205ENST00000617641 NFU1Q9UMS0 254 aa18.46■□□□□ 0.55
PCDHGC3-205ENST00000617641 PASKQ96RG2 1323 aa18.46■□□□□ 0.55
PCDHGC3-205ENST00000617641 CCDC66A2RUB6 948 aa18.46■□□□□ 0.55
PCDHGC3-205ENST00000617641 HAS3O00219 553 aa18.46■□□□□ 0.55
PCDHGC3-205ENST00000617641 IGHA2P01877 340 aa18.46■□□□□ 0.55
PCDHGC3-205ENST00000617641 PYGMP11217 842 aa18.46■□□□□ 0.55
PCDHGC3-205ENST00000617641 POLR2BP30876 1174 aaKnown RBP18.46■□□□□ 0.55
PCDHGC3-205ENST00000617641 GRM5P41594 1212 aa18.46■□□□□ 0.55
PCDHGC3-205ENST00000617641 C1QBPQ07021 282 aaKnown RBP18.46■□□□□ 0.55
PCDHGC3-205ENST00000617641 C1orf131Q8NDD1 294 aaKnown RBP18.46■□□□□ 0.55
PCDHGC3-205ENST00000617641 TLL2Q9Y6L7 1015 aa18.46■□□□□ 0.55
PCDHGC3-205ENST00000617641 TREHO43280 583 aa18.45■□□□□ 0.54
PCDHGC3-205ENST00000617641 GJB6O95452 261 aa18.45■□□□□ 0.54
PCDHGC3-205ENST00000617641 YWHAEP62258 255 aaKnown RBP18.45■□□□□ 0.54
PCDHGC3-205ENST00000617641 ADAM17P78536 824 aa18.45■□□□□ 0.54
PCDHGC3-205ENST00000617641 ORC1Q13415 861 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms