RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 FAM167AQ96KS9 214 aa15.66■□□□□ 0.1
CDH1-213ENST00000612417 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.66■□□□□ 0.1
CDH1-213ENST00000612417 H0YCG3 227 aa15.66■□□□□ 0.1
CDH1-213ENST00000612417 AGTP01019 485 aa15.66■□□□□ 0.1
CDH1-213ENST00000612417 TNFAIP8L3Q5GJ75 292 aa15.66■□□□□ 0.1
CDH1-213ENST00000612417 GJC2Q5T442 439 aaPredicted RBP15.66■□□□□ 0.1
CDH1-213ENST00000612417 TAPT1Q6NXT6 567 aa15.66■□□□□ 0.1
CDH1-213ENST00000612417 ZNF467Q7Z7K2 595 aaPredicted RBP15.66■□□□□ 0.1
CDH1-213ENST00000612417 XPO6Q96QU8 1125 aaKnown RBP15.66■□□□□ 0.1
CDH1-213ENST00000612417 SEMA4AQ9H3S1 761 aa15.66■□□□□ 0.1
CDH1-213ENST00000612417 DHX33Q9H6R0 707 aaKnown RBP15.66■□□□□ 0.1
CDH1-213ENST00000612417 ARHGAP28Q9P2N2 729 aa15.66■□□□□ 0.1
CDH1-213ENST00000612417 HNRNPDLO14979 420 aaKnown RBP15.65■□□□□ 0.1
CDH1-213ENST00000612417 RIPK2O43353 540 aa15.65■□□□□ 0.1
CDH1-213ENST00000612417 ECEL1O95672 775 aa15.65■□□□□ 0.1
CDH1-213ENST00000612417 MYBL1P10243 752 aa15.65■□□□□ 0.1
CDH1-213ENST00000612417 RFC5P40937 340 aa15.65■□□□□ 0.1
CDH1-213ENST00000612417 QPCTQ16769 361 aa15.65■□□□□ 0.1
CDH1-213ENST00000612417 MMS22LQ6ZRQ5 1243 aa15.65■□□□□ 0.1
CDH1-213ENST00000612417 SUGP1Q8IWZ8 645 aaKnown RBP15.65■□□□□ 0.1
CDH1-213ENST00000612417 DHX38Q92620 1227 aaKnown RBP15.65■□□□□ 0.1
CDH1-213ENST00000612417 TRIM11Q96F44 468 aa15.65■□□□□ 0.1
CDH1-213ENST00000612417 MAML3Q96JK9 1138 aa15.65■□□□□ 0.1
CDH1-213ENST00000612417 KIAA1586Q9HCI6 787 aa15.65■□□□□ 0.1
CDH1-213ENST00000612417 SLC5A4Q9NY91 659 aa15.65■□□□□ 0.1
CDH1-213ENST00000612417 WHRNQ9P202 907 aa15.65■□□□□ 0.1
CDH1-213ENST00000612417 ABT1Q9ULW3 272 aaKnown RBP15.65■□□□□ 0.1
CDH1-213ENST00000612417 SLC15A5A6NIM6 579 aa15.64■□□□□ 0.09
CDH1-213ENST00000612417 LGR5O75473 907 aa15.64■□□□□ 0.09
CDH1-213ENST00000612417 SLC1A1P43005 524 aa15.64■□□□□ 0.09
CDH1-213ENST00000612417 IFT88Q13099 833 aa15.64■□□□□ 0.09
CDH1-213ENST00000612417 LAMC2Q13753 1193 aa15.64■□□□□ 0.09
CDH1-213ENST00000612417 MFSD5Q6N075 450 aa15.64■□□□□ 0.09
CDH1-213ENST00000612417 TAS1R3Q7RTX0 852 aa15.64■□□□□ 0.09
CDH1-213ENST00000612417 PLPPR4Q7Z2D5 763 aa15.64■□□□□ 0.09
CDH1-213ENST00000612417 MAIP1Q8WWC4 291 aa15.64■□□□□ 0.09
CDH1-213ENST00000612417 BICD1Q96G01 975 aa15.64■□□□□ 0.09
CDH1-213ENST00000612417 STMN4Q9H169 189 aaPredicted RBP15.64■□□□□ 0.09
CDH1-213ENST00000612417 ADAM7Q9H2U9 754 aa15.64■□□□□ 0.09
CDH1-213ENST00000612417 SMARCAD1Q9H4L7 1026 aa15.64■□□□□ 0.09
CDH1-213ENST00000612417 C1orf112Q9NSG2 853 aa15.64■□□□□ 0.09
CDH1-213ENST00000612417 LRRIQ4A6NIV6 560 aa15.64■□□□□ 0.09
CDH1-213ENST00000612417 RGS16O15492 202 aaPredicted RBP15.64■□□□□ 0.09
CDH1-213ENST00000612417 SNAI1O95863 264 aaPredicted RBP15.64■□□□□ 0.09
CDH1-213ENST00000612417 GH1P01241 217 aa15.64■□□□□ 0.09
CDH1-213ENST00000612417 DLATP10515 647 aaKnown RBP15.64■□□□□ 0.09
CDH1-213ENST00000612417 DRD4P21917 467 aa15.64■□□□□ 0.09
CDH1-213ENST00000612417 MAN1A1P33908 653 aa15.64■□□□□ 0.09
CDH1-213ENST00000612417 ADCYAP1R1P41586 468 aa15.64■□□□□ 0.09
CDH1-213ENST00000612417 ACTN3Q08043 901 aaPredicted RBP15.64■□□□□ 0.09
CDH1-213ENST00000612417 GRM1Q13255 1194 aa15.64■□□□□ 0.09
CDH1-213ENST00000612417 TARBP2Q15633 366 aaKnown RBP15.64■□□□□ 0.09
CDH1-213ENST00000612417 SYDE1Q6ZW31 735 aaPredicted RBP15.64■□□□□ 0.09
CDH1-213ENST00000612417 TRMT10CQ7L0Y3 403 aaKnown RBP15.64■□□□□ 0.09
CDH1-213ENST00000612417 IFNL1Q8IU54 200 aa15.64■□□□□ 0.09
CDH1-213ENST00000612417 MCOLN2Q8IZK6 566 aa15.64■□□□□ 0.09
CDH1-213ENST00000612417 P3H4Q92791 437 aa15.64■□□□□ 0.09
CDH1-213ENST00000612417 CHMP6Q96FZ7 201 aa15.64■□□□□ 0.09
CDH1-213ENST00000612417 SEC16BQ96JE7 1060 aa15.64■□□□□ 0.09
CDH1-213ENST00000612417 TINF2Q9BSI4 451 aa15.64■□□□□ 0.09
CDH1-213ENST00000612417 GPBP1L1Q9HC44 474 aaPredicted RBP15.64■□□□□ 0.09
CDH1-213ENST00000612417 ANAPC7Q9UJX3 599 aa15.64■□□□□ 0.09
CDH1-213ENST00000612417 PCDHB2Q9Y5E7 798 aa15.64■□□□□ 0.09
CDH1-213ENST00000612417 CAPN7Q9Y6W3 813 aa15.64■□□□□ 0.09
CDH1-213ENST00000612417 TP73O15350 636 aa15.63■□□□□ 0.09
CDH1-213ENST00000612417 CLDN3O15551 220 aa15.63■□□□□ 0.09
CDH1-213ENST00000612417 SLC10A3P09131 477 aa15.63■□□□□ 0.09
CDH1-213ENST00000612417 KRT5P13647 590 aa15.63■□□□□ 0.09
CDH1-213ENST00000612417 SCP2P22307 547 aa15.63■□□□□ 0.09
CDH1-213ENST00000612417 BPIFB4P59827 614 aa15.63■□□□□ 0.09
CDH1-213ENST00000612417 ARHGAP1Q07960 439 aa15.63■□□□□ 0.09
CDH1-213ENST00000612417 PTP4A2Q12974 167 aa15.63■□□□□ 0.09
CDH1-213ENST00000612417 CALCOCO2Q13137 446 aa15.63■□□□□ 0.09
CDH1-213ENST00000612417 GKAP1Q5VSY0 366 aaPredicted RBP15.63■□□□□ 0.09
CDH1-213ENST00000612417 MAMDC4Q6UXC1 1216 aa15.63■□□□□ 0.09
CDH1-213ENST00000612417 CACNA2D3Q8IZS8 1091 aa15.63■□□□□ 0.09
CDH1-213ENST00000612417 NPLOC4Q8TAT6 608 aa15.63■□□□□ 0.09
CDH1-213ENST00000612417 DEPTORQ8TB45 409 aa15.63■□□□□ 0.09
CDH1-213ENST00000612417 ASAP3Q8TDY4 903 aa15.63■□□□□ 0.09
CDH1-213ENST00000612417 ATXN2LQ8WWM7 1075 aaKnown RBP15.63■□□□□ 0.09
CDH1-213ENST00000612417 ZNF317Q96PQ6 595 aaPredicted RBP15.63■□□□□ 0.09
CDH1-213ENST00000612417 ROPN1BQ9BZX4 212 aaPredicted RBP15.63■□□□□ 0.09
CDH1-213ENST00000612417 CCDC134Q9H6E4 229 aa15.63■□□□□ 0.09
CDH1-213ENST00000612417 ROPN1Q9HAT0 212 aaPredicted RBP15.63■□□□□ 0.09
CDH1-213ENST00000612417 PTPN22Q9Y2R2 807 aa15.63■□□□□ 0.09
CDH1-213ENST00000612417 STYXL1Q9Y6J8 313 aa15.63■□□□□ 0.09
CDH1-213ENST00000612417 MROH7Q68CQ1 1323 aa15.63■□□□□ 0.09
CDH1-213ENST00000612417 EXTL3O43909 919 aa15.63■□□□□ 0.09
CDH1-213ENST00000612417 CHN1P15882 459 aa15.63■□□□□ 0.09
CDH1-213ENST00000612417 GLRA2P23416 452 aa15.63■□□□□ 0.09
CDH1-213ENST00000612417 KCNJ1P48048 391 aa15.63■□□□□ 0.09
CDH1-213ENST00000612417 CENPCQ03188 943 aa15.63■□□□□ 0.09
CDH1-213ENST00000612417 STRN3Q13033 797 aa15.63■□□□□ 0.09
CDH1-213ENST00000612417 PSMD6Q15008 389 aa15.63■□□□□ 0.09
CDH1-213ENST00000612417 ZACNQ401N2 412 aa15.63■□□□□ 0.09
CDH1-213ENST00000612417 SGO2Q562F6 1265 aa15.63■□□□□ 0.09
CDH1-213ENST00000612417 RHBDF2Q6PJF5 856 aa15.63■□□□□ 0.09
CDH1-213ENST00000612417 CEP120Q8N960 986 aa15.63■□□□□ 0.09
CDH1-213ENST00000612417 MDM1Q8TC05 714 aa15.63■□□□□ 0.09
CDH1-213ENST00000612417 ZNF516Q92618 1163 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms