RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 ANKRD35Q8N283 1001 aa21.61■■□□□ 1.05
SSBP3-216ENST00000610401 TMEM161BQ8NDZ6 487 aa21.61■■□□□ 1.05
SSBP3-216ENST00000610401 TMEM143Q96AN5 459 aa21.61■■□□□ 1.05
SSBP3-216ENST00000610401 MAGEB18Q96M61 343 aa21.61■■□□□ 1.05
SSBP3-216ENST00000610401 TMEM8AQ9HCN3 771 aa21.61■■□□□ 1.05
SSBP3-216ENST00000610401 UNC5CO95185 931 aa21.61■■□□□ 1.05
SSBP3-216ENST00000610401 PTK6Q13882 451 aa21.61■■□□□ 1.05
SSBP3-216ENST00000610401 CRYMQ14894 314 aa21.61■■□□□ 1.05
SSBP3-216ENST00000610401 MTERF2Q49AM1 385 aa21.61■■□□□ 1.05
SSBP3-216ENST00000610401 ANO5Q75V66 913 aa21.61■■□□□ 1.05
SSBP3-216ENST00000610401 PPP1R12CQ9BZL4 782 aa21.61■■□□□ 1.05
SSBP3-216ENST00000610401 CCDC134Q9H6E4 229 aa21.61■■□□□ 1.05
SSBP3-216ENST00000610401 SEPT9Q9UHD8 586 aaPredicted RBP21.61■■□□□ 1.05
SSBP3-216ENST00000610401 IVNS1ABPQ9Y6Y0 642 aa21.61■■□□□ 1.05
SSBP3-216ENST00000610401 ADRA1DP25100 572 aa21.6■■□□□ 1.05
SSBP3-216ENST00000610401 RPS6P62753 249 aaKnown RBP21.6■■□□□ 1.05
SSBP3-216ENST00000610401 WDR44Q5JSH3 913 aa21.6■■□□□ 1.05
SSBP3-216ENST00000610401 SWSAP1Q6NVH7 229 aa21.6■■□□□ 1.05
SSBP3-216ENST00000610401 RFWD3Q6PCD5 774 aa21.6■■□□□ 1.05
SSBP3-216ENST00000610401 CROCCP2Q86T23 111 aa21.6■■□□□ 1.05
SSBP3-216ENST00000610401 PIK3R2O00459 728 aa21.6■■□□□ 1.05
SSBP3-216ENST00000610401 CCND1P24385 295 aa21.6■■□□□ 1.05
SSBP3-216ENST00000610401 HADHBP55084 474 aaKnown RBP21.6■■□□□ 1.05
SSBP3-216ENST00000610401 STRIP1Q5VSL9 837 aa21.6■■□□□ 1.05
SSBP3-216ENST00000610401 CAPRIN2Q6IMN6 1127 aaKnown RBP21.6■■□□□ 1.05
SSBP3-216ENST00000610401 CCDC89Q8N998 374 aa21.6■■□□□ 1.05
SSBP3-216ENST00000610401 GRK7Q8WTQ7 553 aa21.6■■□□□ 1.05
SSBP3-216ENST00000610401 PRR11Q96HE9 360 aaPredicted RBP21.6■■□□□ 1.05
SSBP3-216ENST00000610401 MCEEQ96PE7 176 aa21.6■■□□□ 1.05
SSBP3-216ENST00000610401 TBC1D10AQ9BXI6 508 aa21.6■■□□□ 1.05
SSBP3-216ENST00000610401 PTPRJQ12913 1337 aa21.6■■□□□ 1.05
SSBP3-216ENST00000610401 RFX1P22670 979 aa21.6■■□□□ 1.05
SSBP3-216ENST00000610401 GNA15P30679 374 aa21.6■■□□□ 1.05
SSBP3-216ENST00000610401 NLRP11P59045 1033 aaKnown RBP21.6■■□□□ 1.05
SSBP3-216ENST00000610401 DCUN1D2Q6PH85 259 aa21.6■■□□□ 1.05
SSBP3-216ENST00000610401 RMDN3Q96TC7 470 aa21.6■■□□□ 1.05
SSBP3-216ENST00000610401 TMEM109Q9BVC6 243 aa21.6■■□□□ 1.05
SSBP3-216ENST00000610401 MAK16Q9BXY0 300 aaKnown RBP21.6■■□□□ 1.05
SSBP3-216ENST00000610401 TMX2Q9Y320 296 aa21.6■■□□□ 1.05
SSBP3-216ENST00000610401 NUMBLQ9Y6R0 609 aa21.6■■□□□ 1.05
SSBP3-216ENST00000610401 SLC26A4O43511 780 aa21.59■■□□□ 1.05
SSBP3-216ENST00000610401 ZBED4O75132 1171 aa21.59■■□□□ 1.05
SSBP3-216ENST00000610401 LGR5O75473 907 aa21.59■■□□□ 1.05
SSBP3-216ENST00000610401 ALDH1B1P30837 517 aa21.59■■□□□ 1.05
SSBP3-216ENST00000610401 GTF2BQ00403 316 aa21.59■■□□□ 1.05
SSBP3-216ENST00000610401 TFDP1Q14186 410 aa21.59■■□□□ 1.05
SSBP3-216ENST00000610401 AGO4Q9HCK5 861 aaKnown RBP21.59■■□□□ 1.05
SSBP3-216ENST00000610401 CEP350Q5VT06 3117 aa21.59■■□□□ 1.05
SSBP3-216ENST00000610401 EME2A4GXA9 379 aaPredicted RBP21.59■■□□□ 1.05
SSBP3-216ENST00000610401 HLA-DRAP01903 254 aa21.59■■□□□ 1.05
SSBP3-216ENST00000610401 ABL2P42684 1182 aa21.59■■□□□ 1.05
SSBP3-216ENST00000610401 GNPTABQ3T906 1256 aa21.59■■□□□ 1.05
SSBP3-216ENST00000610401 LIG4P49917 911 aa21.58■■□□□ 1.05
SSBP3-216ENST00000610401 ZBTB16Q05516 673 aa21.58■■□□□ 1.05
SSBP3-216ENST00000610401 CYP24A1Q07973 514 aa21.58■■□□□ 1.05
SSBP3-216ENST00000610401 NFIL3Q16649 462 aa21.58■■□□□ 1.05
SSBP3-216ENST00000610401 BBS9Q3SYG4 887 aa21.58■■□□□ 1.05
SSBP3-216ENST00000610401 CDR2LQ86X02 465 aaPredicted RBP21.58■■□□□ 1.05
SSBP3-216ENST00000610401 FAM13CQ8NE31 585 aa21.58■■□□□ 1.05
SSBP3-216ENST00000610401 MASTLQ96GX5 879 aa21.58■■□□□ 1.05
SSBP3-216ENST00000610401 OSBPL1AQ9BXW6 950 aa21.58■■□□□ 1.05
SSBP3-216ENST00000610401 FBXO6Q9NRD1 293 aaPredicted RBP21.58■■□□□ 1.05
SSBP3-216ENST00000610401 MYPNQ86TC9 1320 aa21.58■■□□□ 1.05
SSBP3-216ENST00000610401 OSTNP61366 133 aa21.58■■□□□ 1.05
SSBP3-216ENST00000610401 MAGEC3Q8TD91 643 aa21.58■■□□□ 1.05
SSBP3-216ENST00000610401 SLC5A4Q9NY91 659 aa21.58■■□□□ 1.05
SSBP3-216ENST00000610401 PRKAG3Q9UGI9 489 aa21.58■■□□□ 1.05
SSBP3-216ENST00000610401 PCSK1NQ9UHG2 260 aa21.58■■□□□ 1.05
SSBP3-216ENST00000610401 LRRIQ4A6NIV6 560 aa21.58■■□□□ 1.04
SSBP3-216ENST00000610401 NFX1Q12986 1120 aaKnown RBP21.58■■□□□ 1.04
SSBP3-216ENST00000610401 RHOT1Q8IXI2 618 aa21.58■■□□□ 1.04
SSBP3-216ENST00000610401 GBP7Q8N8V2 638 aaPredicted RBP21.58■■□□□ 1.04
SSBP3-216ENST00000610401 RFWD2Q8NHY2 731 aa21.58■■□□□ 1.04
SSBP3-216ENST00000610401 WNK4Q96J92 1243 aa21.58■■□□□ 1.04
SSBP3-216ENST00000610401 UBE4BO95155 1302 aa21.57■■□□□ 1.04
SSBP3-216ENST00000610401 SPARCL1Q14515 664 aa21.57■■□□□ 1.04
SSBP3-216ENST00000610401 CCDC6Q16204 474 aa21.57■■□□□ 1.04
SSBP3-216ENST00000610401 PPP1R21Q6ZMI0 780 aa21.57■■□□□ 1.04
SSBP3-216ENST00000610401 ZBTB33Q86T24 672 aa21.57■■□□□ 1.04
SSBP3-216ENST00000610401 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.57■■□□□ 1.04
SSBP3-216ENST00000610401 ARMCX1Q9P291 453 aa21.57■■□□□ 1.04
SSBP3-216ENST00000610401 AGTPBP1Q9UPW5 1226 aa21.57■■□□□ 1.04
SSBP3-216ENST00000610401 UNGP13051 313 aaPredicted RBP21.57■■□□□ 1.04
SSBP3-216ENST00000610401 GCLCP48506 637 aaPredicted RBP21.57■■□□□ 1.04
SSBP3-216ENST00000610401 POLGP54098 1239 aaPredicted RBP21.57■■□□□ 1.04
SSBP3-216ENST00000610401 MAMLD1Q13495 774 aa21.57■■□□□ 1.04
SSBP3-216ENST00000610401 ARHGEF16Q5VV41 709 aa21.57■■□□□ 1.04
SSBP3-216ENST00000610401 CRELD2Q6UXH1 353 aaPredicted RBP21.57■■□□□ 1.04
SSBP3-216ENST00000610401 LRRC6Q86X45 466 aa21.57■■□□□ 1.04
SSBP3-216ENST00000610401 SCYL3Q8IZE3 742 aa21.57■■□□□ 1.04
SSBP3-216ENST00000610401 CCDC33Q8N5R6 958 aa21.57■■□□□ 1.04
SSBP3-216ENST00000610401 RIT2Q99578 217 aa21.57■■□□□ 1.04
SSBP3-216ENST00000610401 TCHPQ9BT92 498 aa21.57■■□□□ 1.04
SSBP3-216ENST00000610401 GINM1Q9NU53 330 aa21.57■■□□□ 1.04
SSBP3-216ENST00000610401 SLC17A7Q9P2U7 560 aa21.57■■□□□ 1.04
SSBP3-216ENST00000610401 PROSCO94903 275 aa21.56■■□□□ 1.04
SSBP3-216ENST00000610401 GCAP28676 217 aa21.56■■□□□ 1.04
SSBP3-216ENST00000610401 HIRAP54198 1017 aaPredicted RBP21.56■■□□□ 1.04
SSBP3-216ENST00000610401 MAPK6Q16659 721 aa21.56■■□□□ 1.04
SSBP3-216ENST00000610401 TRABD2AQ86V40 505 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms