RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 MFSD14AQ96MC6 490 aa15.43■□□□□ 0.06
HDDC2-209ENST00000609477 RIPOR3Q96MK2 946 aa15.43■□□□□ 0.06
HDDC2-209ENST00000609477 FNBP1Q96RU3 617 aa15.43■□□□□ 0.06
HDDC2-209ENST00000609477 UHRF1Q96T88 793 aaPredicted RBP15.43■□□□□ 0.06
HDDC2-209ENST00000609477 COL25A1Q9BXS0 654 aaPredicted RBP15.43■□□□□ 0.06
HDDC2-209ENST00000609477 PDE11AQ9HCR9 933 aa15.43■□□□□ 0.06
HDDC2-209ENST00000609477 INTS13Q9NVM9 706 aa15.43■□□□□ 0.06
HDDC2-209ENST00000609477 ZDHHC7Q9NXF8 308 aa15.43■□□□□ 0.06
HDDC2-209ENST00000609477 R3HCC1Q9Y3T6 440 aaKnown RBP15.43■□□□□ 0.06
HDDC2-209ENST00000609477 USP15Q9Y4E8 981 aaPredicted RBP15.43■□□□□ 0.06
HDDC2-209ENST00000609477 SPDYE4A6NLX3 237 aa15.42■□□□□ 0.06
HDDC2-209ENST00000609477 I3L4J1 428 aa15.42■□□□□ 0.06
HDDC2-209ENST00000609477 GADD45BO75293 160 aaPredicted RBP15.42■□□□□ 0.06
HDDC2-209ENST00000609477 TNNC2P02585 160 aa15.42■□□□□ 0.06
HDDC2-209ENST00000609477 CYP11A1P05108 521 aa15.42■□□□□ 0.06
HDDC2-209ENST00000609477 TMEM191BP0C7N4 346 aa15.42■□□□□ 0.06
HDDC2-209ENST00000609477 ODC1P11926 461 aa15.42■□□□□ 0.06
HDDC2-209ENST00000609477 IL9P15248 144 aa15.42■□□□□ 0.06
HDDC2-209ENST00000609477 HOXA9P31269 272 aa15.42■□□□□ 0.06
HDDC2-209ENST00000609477 OR1D2P34982 312 aa15.42■□□□□ 0.06
HDDC2-209ENST00000609477 CYP2J2P51589 502 aa15.42■□□□□ 0.06
HDDC2-209ENST00000609477 AP3M2P53677 418 aa15.42■□□□□ 0.06
HDDC2-209ENST00000609477 RBP5P82980 135 aa15.42■□□□□ 0.06
HDDC2-209ENST00000609477 YWHAHQ04917 246 aaPredicted RBP15.42■□□□□ 0.06
HDDC2-209ENST00000609477 ENPEPQ07075 957 aa15.42■□□□□ 0.06
HDDC2-209ENST00000609477 CYP24A1Q07973 514 aa15.42■□□□□ 0.06
HDDC2-209ENST00000609477 CBX2Q14781 532 aaPredicted RBP15.42■□□□□ 0.06
HDDC2-209ENST00000609477 CLUL1Q15846 466 aa15.42■□□□□ 0.06
HDDC2-209ENST00000609477 ATAT1Q5SQI0 421 aa15.42■□□□□ 0.06
HDDC2-209ENST00000609477 TPGS2Q68CL5 300 aa15.42■□□□□ 0.06
HDDC2-209ENST00000609477 USP37Q86T82 979 aa15.42■□□□□ 0.06
HDDC2-209ENST00000609477 PALB2Q86YC2 1186 aa15.42■□□□□ 0.06
HDDC2-209ENST00000609477 ADHFE1Q8IWW8 467 aa15.42■□□□□ 0.06
HDDC2-209ENST00000609477 ZNF461Q8TAF7 563 aa15.42■□□□□ 0.06
HDDC2-209ENST00000609477 NOC3LQ8WTT2 800 aaKnown RBP15.42■□□□□ 0.06
HDDC2-209ENST00000609477 MAN1C1Q9NR34 630 aa15.42■□□□□ 0.06
HDDC2-209ENST00000609477 PCDHA5Q9Y5H7 936 aa15.42■□□□□ 0.06
HDDC2-209ENST00000609477 CDY1Q9Y6F8 540 aa15.42■□□□□ 0.06
HDDC2-209ENST00000609477 KPNA7A9QM74 516 aa15.41■□□□□ 0.06
HDDC2-209ENST00000609477 ABLIM3O94929 683 aa15.41■□□□□ 0.06
HDDC2-209ENST00000609477 NR3C1P04150 777 aa15.41■□□□□ 0.06
HDDC2-209ENST00000609477 HNRNPA1P09651 372 aaKnown RBP eCLIP15.41■□□□□ 0.06
HDDC2-209ENST00000609477 RPL17P18621 184 aaKnown RBP15.41■□□□□ 0.06
HDDC2-209ENST00000609477 GUCY2FP51841 1108 aa15.41■□□□□ 0.06
HDDC2-209ENST00000609477 EDRF1Q3B7T1 1238 aa15.41■□□□□ 0.06
HDDC2-209ENST00000609477 GPR149Q86SP6 731 aa15.41■□□□□ 0.06
HDDC2-209ENST00000609477 CSGALNACT2Q8N6G5 542 aa15.41■□□□□ 0.06
HDDC2-209ENST00000609477 C1orf127Q8N9H9 656 aa15.41■□□□□ 0.06
HDDC2-209ENST00000609477 RDH13Q8NBN7 331 aa15.41■□□□□ 0.06
HDDC2-209ENST00000609477 KREMEN2Q8NCW0 462 aa15.41■□□□□ 0.06
HDDC2-209ENST00000609477 SPATA18Q8TC71 538 aa15.41■□□□□ 0.06
HDDC2-209ENST00000609477 SENP8Q96LD8 212 aa15.41■□□□□ 0.06
HDDC2-209ENST00000609477 PHF7Q9BWX1 381 aaPredicted RBP15.41■□□□□ 0.06
HDDC2-209ENST00000609477 FBXW11Q9UKB1 542 aa15.41■□□□□ 0.06
HDDC2-209ENST00000609477 FRMD4BQ9Y2L6 1034 aa15.41■□□□□ 0.06
HDDC2-209ENST00000609477 TCF20Q9UGU0 1960 aaKnown RBP15.41■□□□□ 0.06
HDDC2-209ENST00000609477 PLXNA3P51805 1871 aa15.41■□□□□ 0.06
HDDC2-209ENST00000609477 C19orf67A6NJJ6 358 aa15.4■□□□□ 0.06
HDDC2-209ENST00000609477 OR6C75A6NL08 312 aa15.4■□□□□ 0.06
HDDC2-209ENST00000609477 DLL1O00548 723 aa15.4■□□□□ 0.06
HDDC2-209ENST00000609477 ZMYND10O75800 440 aa15.4■□□□□ 0.06
HDDC2-209ENST00000609477 ITGB3P05106 788 aa15.4■□□□□ 0.06
HDDC2-209ENST00000609477 POU2F2P09086 479 aa15.4■□□□□ 0.06
HDDC2-209ENST00000609477 TNNI1P19237 187 aa15.4■□□□□ 0.06
HDDC2-209ENST00000609477 WNT7BP56706 349 aa15.4■□□□□ 0.06
HDDC2-209ENST00000609477 CLDN10P78369 228 aa15.4■□□□□ 0.06
HDDC2-209ENST00000609477 MYO1EQ12965 1108 aa15.4■□□□□ 0.06
HDDC2-209ENST00000609477 STIM1Q13586 685 aa15.4■□□□□ 0.06
HDDC2-209ENST00000609477 CTXN3Q4LDR2 81 aa15.4■□□□□ 0.06
HDDC2-209ENST00000609477 LIN9Q5TKA1 542 aa15.4■□□□□ 0.06
HDDC2-209ENST00000609477 CCDC149Q6ZUS6 474 aa15.4■□□□□ 0.06
HDDC2-209ENST00000609477 METTL23Q86XA0 190 aa15.4■□□□□ 0.06
HDDC2-209ENST00000609477 CXorf38Q8TB03 319 aa15.4■□□□□ 0.06
HDDC2-209ENST00000609477 GBP4Q96PP9 640 aa15.4■□□□□ 0.06
HDDC2-209ENST00000609477 CGRRF1Q99675 332 aa15.4■□□□□ 0.06
HDDC2-209ENST00000609477 GDAP2Q9NXN4 497 aa15.4■□□□□ 0.06
HDDC2-209ENST00000609477 FBXL5Q9UKA1 691 aa15.4■□□□□ 0.06
HDDC2-209ENST00000609477 AGAP1Q9UPQ3 857 aa15.4■□□□□ 0.06
HDDC2-209ENST00000609477 VCANP13611 3396 aa15.39■□□□□ 0.05
HDDC2-209ENST00000609477 CCDC195A0A1B0GUA6 201 aa15.39■□□□□ 0.05
HDDC2-209ENST00000609477 PPEF2O14830 753 aa15.39■□□□□ 0.05
HDDC2-209ENST00000609477 IKBKBO14920 756 aa15.39■□□□□ 0.05
HDDC2-209ENST00000609477 ATF2P15336 505 aa15.39■□□□□ 0.05
HDDC2-209ENST00000609477 POLR2BP30876 1174 aaKnown RBP15.39■□□□□ 0.05
HDDC2-209ENST00000609477 MCCD1P59942 119 aaPredicted RBP15.39■□□□□ 0.05
HDDC2-209ENST00000609477 ZP2Q05996 745 aa15.39■□□□□ 0.05
HDDC2-209ENST00000609477 ZCWPW2Q504Y3 356 aa15.39■□□□□ 0.05
HDDC2-209ENST00000609477 RARS2Q5T160 578 aaKnown RBP15.39■□□□□ 0.05
HDDC2-209ENST00000609477 OVOS1Q6IE37 1185 aa15.39■□□□□ 0.05
HDDC2-209ENST00000609477 CENPPQ6IPU0 288 aa15.39■□□□□ 0.05
HDDC2-209ENST00000609477 FOXR2Q6PJQ5 311 aa15.39■□□□□ 0.05
HDDC2-209ENST00000609477 DPH6Q7L8W6 267 aa15.39■□□□□ 0.05
HDDC2-209ENST00000609477 GLYCTKQ8IVS8 523 aa15.39■□□□□ 0.05
HDDC2-209ENST00000609477 TMEM86AQ8N2M4 240 aa15.39■□□□□ 0.05
HDDC2-209ENST00000609477 TMC2Q8TDI7 906 aa15.39■□□□□ 0.05
HDDC2-209ENST00000609477 PARD3BQ8TEW8 1205 aa15.39■□□□□ 0.05
HDDC2-209ENST00000609477 BORCS6Q96GS4 357 aa15.39■□□□□ 0.05
HDDC2-209ENST00000609477 PRKD2Q9BZL6 878 aa15.39■□□□□ 0.05
HDDC2-209ENST00000609477 MTMR12Q9C0I1 747 aa15.39■□□□□ 0.05
HDDC2-209ENST00000609477 USTQ9Y2C2 406 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms