RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 CALCAP01258 141 aa23.08■■□□□ 1.28
USP6NL-204ENST00000606752 P4HA1P13674 534 aa23.08■■□□□ 1.28
USP6NL-204ENST00000606752 KCNE1P15382 129 aa23.08■■□□□ 1.28
USP6NL-204ENST00000606752 ABCB4P21439 1286 aa23.08■■□□□ 1.28
USP6NL-204ENST00000606752 FBXO47Q5MNV8 452 aa23.08■■□□□ 1.28
USP6NL-204ENST00000606752 THAP2Q9H0W7 228 aa23.08■■□□□ 1.28
USP6NL-204ENST00000606752 AGO3Q9H9G7 860 aaKnown RBP23.08■■□□□ 1.28
USP6NL-204ENST00000606752 PHF24Q9UPV7 400 aa23.08■■□□□ 1.28
USP6NL-204ENST00000606752 A0A0U1RQG5 324 aaPredicted RBP23.07■■□□□ 1.28
USP6NL-204ENST00000606752 KBTBD13C9JR72 458 aa23.07■■□□□ 1.28
USP6NL-204ENST00000606752 PALMO75781 387 aa23.07■■□□□ 1.28
USP6NL-204ENST00000606752 ACAD10Q6JQN1 1059 aa23.07■■□□□ 1.28
USP6NL-204ENST00000606752 SCARA5Q6ZMJ2 495 aa23.07■■□□□ 1.28
USP6NL-204ENST00000606752 RFFLQ8WZ73 363 aa23.07■■□□□ 1.28
USP6NL-204ENST00000606752 CYP3A43Q9HB55 503 aa23.07■■□□□ 1.28
USP6NL-204ENST00000606752 ERVK-5Q9HDB9 667 aa23.07■■□□□ 1.28
USP6NL-204ENST00000606752 UBQLN1Q9UMX0 589 aaKnown RBP23.07■■□□□ 1.28
USP6NL-204ENST00000606752 NCANO14594 1321 aa23.07■■□□□ 1.28
USP6NL-204ENST00000606752 SMIM28A0A1B0GU29 152 aa23.06■■□□□ 1.28
USP6NL-204ENST00000606752 CLEC16AQ2KHT3 1053 aa23.06■■□□□ 1.28
USP6NL-204ENST00000606752 UNC93B1Q9H1C4 597 aa23.06■■□□□ 1.28
USP6NL-204ENST00000606752 FAM105AQ9NUU6 356 aa23.06■■□□□ 1.28
USP6NL-204ENST00000606752 KLK14Q9P0G3 267 aa23.06■■□□□ 1.28
USP6NL-204ENST00000606752 PADI3Q9ULW8 664 aa23.06■■□□□ 1.28
USP6NL-204ENST00000606752 SAR1BQ9Y6B6 198 aa23.06■■□□□ 1.28
USP6NL-204ENST00000606752 CTIFO43310 598 aaKnown RBP23.05■■□□□ 1.28
USP6NL-204ENST00000606752 XPOTO43592 962 aaKnown RBP23.05■■□□□ 1.28
USP6NL-204ENST00000606752 ZSCAN20P17040 1043 aaPredicted RBP23.05■■□□□ 1.28
USP6NL-204ENST00000606752 GPC5P78333 572 aa23.05■■□□□ 1.28
USP6NL-204ENST00000606752 MYO1EQ12965 1108 aa23.05■■□□□ 1.28
USP6NL-204ENST00000606752 GLRA4Q5JXX5 417 aa23.05■■□□□ 1.28
USP6NL-204ENST00000606752 TRIM72Q6ZMU5 477 aa23.05■■□□□ 1.28
USP6NL-204ENST00000606752 SLC35G2Q8TBE7 412 aa23.05■■□□□ 1.28
USP6NL-204ENST00000606752 TRPV6Q9H1D0 765 aa23.05■■□□□ 1.28
USP6NL-204ENST00000606752 PDCL3Q9H2J4 239 aa23.05■■□□□ 1.28
USP6NL-204ENST00000606752 SQORQ9Y6N5 450 aa23.05■■□□□ 1.28
USP6NL-204ENST00000606752 DNAH12Q6ZR08 3092 aa23.05■■□□□ 1.28
USP6NL-204ENST00000606752 GRID2IPA4D2P6 1211 aa23.05■■□□□ 1.28
USP6NL-204ENST00000606752 ARVCFO00192 962 aa23.05■■□□□ 1.28
USP6NL-204ENST00000606752 THAP12O43422 761 aa23.05■■□□□ 1.28
USP6NL-204ENST00000606752 GHRP10912 638 aa23.05■■□□□ 1.28
USP6NL-204ENST00000606752 UNGP13051 313 aaPredicted RBP23.05■■□□□ 1.28
USP6NL-204ENST00000606752 HACE1Q8IYU2 909 aa23.05■■□□□ 1.28
USP6NL-204ENST00000606752 USP38Q8NB14 1042 aa23.05■■□□□ 1.28
USP6NL-204ENST00000606752 TPCN2Q8NHX9 752 aa23.05■■□□□ 1.28
USP6NL-204ENST00000606752 ZNF606Q8WXB4 792 aa23.05■■□□□ 1.28
USP6NL-204ENST00000606752 C18orf25Q96B23 403 aaPredicted RBP23.05■■□□□ 1.28
USP6NL-204ENST00000606752 CARD6Q9BX69 1037 aa23.05■■□□□ 1.28
USP6NL-204ENST00000606752 FAM124BQ9H5Z6 455 aaPredicted RBP23.05■■□□□ 1.28
USP6NL-204ENST00000606752 TUBGCP4Q9UGJ1 667 aa23.05■■□□□ 1.28
USP6NL-204ENST00000606752 CD4P01730 458 aa23.04■■□□□ 1.28
USP6NL-204ENST00000606752 CYP1A1P04798 512 aaPredicted RBP23.04■■□□□ 1.28
USP6NL-204ENST00000606752 CD52P31358 61 aa23.04■■□□□ 1.28
USP6NL-204ENST00000606752 CDH8P55286 799 aa23.04■■□□□ 1.28
USP6NL-204ENST00000606752 PAK2Q13177 524 aa23.04■■□□□ 1.28
USP6NL-204ENST00000606752 LPIN1Q14693 890 aa23.04■■□□□ 1.28
USP6NL-204ENST00000606752 ZNF618Q5T7W0 954 aa23.04■■□□□ 1.28
USP6NL-204ENST00000606752 RHOT2Q8IXI1 618 aa23.04■■□□□ 1.28
USP6NL-204ENST00000606752 LRRC52Q8N7C0 313 aa23.04■■□□□ 1.28
USP6NL-204ENST00000606752 ARHGEF26Q96DR7 871 aa23.04■■□□□ 1.28
USP6NL-204ENST00000606752 SEZ6LQ9BYH1 1024 aa23.04■■□□□ 1.28
USP6NL-204ENST00000606752 OSBPL7Q9BZF2 842 aa23.04■■□□□ 1.28
USP6NL-204ENST00000606752 SDCBP2Q9H190 292 aa23.04■■□□□ 1.28
USP6NL-204ENST00000606752 WBP1LQ9NX94 342 aa23.04■■□□□ 1.28
USP6NL-204ENST00000606752 PUF60Q9UHX1 559 aaKnown RBP23.04■■□□□ 1.28
USP6NL-204ENST00000606752 TLR3O15455 904 aaKnown RBP23.03■■□□□ 1.28
USP6NL-204ENST00000606752 PRLRP16471 622 aa23.03■■□□□ 1.28
USP6NL-204ENST00000606752 TCEAL1Q15170 157 aa23.03■■□□□ 1.28
USP6NL-204ENST00000606752 ZNF394Q53GI3 561 aa23.03■■□□□ 1.28
USP6NL-204ENST00000606752 MNS1Q8NEH6 495 aa23.03■■□□□ 1.28
USP6NL-204ENST00000606752 CALR3Q96L12 384 aaKnown RBP23.03■■□□□ 1.28
USP6NL-204ENST00000606752 SMYD3Q9H7B4 428 aa23.03■■□□□ 1.28
USP6NL-204ENST00000606752 PAK6Q9NQU5 681 aaPredicted RBP23.03■■□□□ 1.28
USP6NL-204ENST00000606752 DNM1LO00429 736 aa23.03■■□□□ 1.28
USP6NL-204ENST00000606752 CKBP12277 381 aa23.03■■□□□ 1.28
USP6NL-204ENST00000606752 CYP3A5P20815 502 aa23.03■■□□□ 1.28
USP6NL-204ENST00000606752 RAP1GAPP47736 663 aa23.03■■□□□ 1.28
USP6NL-204ENST00000606752 TNNC1P63316 161 aa23.03■■□□□ 1.28
USP6NL-204ENST00000606752 WHAMMP3Q1A5X7 153 aa23.03■■□□□ 1.28
USP6NL-204ENST00000606752 C9orf57Q5W0N0 161 aa23.03■■□□□ 1.28
USP6NL-204ENST00000606752 LRRC57Q8N9N7 239 aa23.03■■□□□ 1.28
USP6NL-204ENST00000606752 CYFIP2Q96F07 1278 aa23.03■■□□□ 1.28
USP6NL-204ENST00000606752 TRAIPQ9BWF2 469 aa23.03■■□□□ 1.28
USP6NL-204ENST00000606752 OSGEPQ9NPF4 335 aa23.03■■□□□ 1.28
USP6NL-204ENST00000606752 RNF19AQ9NV58 838 aa23.03■■□□□ 1.28
USP6NL-204ENST00000606752 SNX12Q9UMY4 172 aa23.03■■□□□ 1.28
USP6NL-204ENST00000606752 MYH10P35580 1976 aa23.02■■□□□ 1.28
USP6NL-204ENST00000606752 RALGAPA2Q2PPJ7 1873 aa23.02■■□□□ 1.28
USP6NL-204ENST00000606752 FAM170AA1A519 330 aa23.02■■□□□ 1.28
USP6NL-204ENST00000606752 ITGA4P13612 1032 aa23.02■■□□□ 1.28
USP6NL-204ENST00000606752 TTC39CQ8N584 583 aa23.02■■□□□ 1.28
USP6NL-204ENST00000606752 TLR10Q9BXR5 811 aa23.02■■□□□ 1.28
USP6NL-204ENST00000606752 PAEPP09466 180 aa23.01■■□□□ 1.27
USP6NL-204ENST00000606752 HADHBP55084 474 aaKnown RBP23.01■■□□□ 1.27
USP6NL-204ENST00000606752 CENPCQ03188 943 aa23.01■■□□□ 1.27
USP6NL-204ENST00000606752 MEI1Q5TIA1 1274 aa23.01■■□□□ 1.27
USP6NL-204ENST00000606752 SLFN11Q7Z7L1 901 aa23.01■■□□□ 1.27
USP6NL-204ENST00000606752 SYCE1Q8N0S2 351 aa23.01■■□□□ 1.27
USP6NL-204ENST00000606752 MMS19Q96T76 1030 aa23.01■■□□□ 1.27
USP6NL-204ENST00000606752 GTF3C4Q9UKN8 822 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms