RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 BMT2Q1RMZ1 405 aa12.49□□□□□ -0.41
CCDC12-209ENST00000604164 SV2CQ496J9 727 aa12.49□□□□□ -0.41
CCDC12-209ENST00000604164 SLC7A14Q8TBB6 771 aa12.49□□□□□ -0.41
CCDC12-209ENST00000604164 CBWD1Q9BRT8 395 aa12.49□□□□□ -0.41
CCDC12-209ENST00000604164 FGFBP2Q9BYJ0 223 aa12.49□□□□□ -0.41
CCDC12-209ENST00000604164 PCIF1Q9H4Z3 704 aa12.49□□□□□ -0.41
CCDC12-209ENST00000604164 MUTYHQ9UIF7 546 aa12.49□□□□□ -0.41
CCDC12-209ENST00000604164 FBXL5Q9UKA1 691 aa12.49□□□□□ -0.41
CCDC12-209ENST00000604164 ITGA11Q9UKX5 1188 aa12.49□□□□□ -0.41
CCDC12-209ENST00000604164 ZFP37Q9Y6Q3 630 aaPredicted RBP12.49□□□□□ -0.41
CCDC12-209ENST00000604164 PDCD11Q14690 1871 aaKnown RBP12.48□□□□□ -0.41
CCDC12-209ENST00000604164 C2CD4DB7Z1M9 353 aa12.48□□□□□ -0.41
CCDC12-209ENST00000604164 ADAM12O43184 909 aa12.48□□□□□ -0.41
CCDC12-209ENST00000604164 TBC1D4O60343 1298 aa12.48□□□□□ -0.41
CCDC12-209ENST00000604164 RFPL2O75678 378 aa12.48□□□□□ -0.41
CCDC12-209ENST00000604164 ABLIM3O94929 683 aa12.48□□□□□ -0.41
CCDC12-209ENST00000604164 TNNC2P02585 160 aa12.48□□□□□ -0.41
CCDC12-209ENST00000604164 LRG1P02750 347 aa12.48□□□□□ -0.41
CCDC12-209ENST00000604164 TMEM191BP0C7N4 346 aa12.48□□□□□ -0.41
CCDC12-209ENST00000604164 CPB1P15086 417 aa12.48□□□□□ -0.41
CCDC12-209ENST00000604164 SP100P23497 879 aaPredicted RBP12.48□□□□□ -0.41
CCDC12-209ENST00000604164 ARPP19P56211 112 aa12.48□□□□□ -0.41
CCDC12-209ENST00000604164 ROR1Q01973 937 aa12.48□□□□□ -0.41
CCDC12-209ENST00000604164 MTMR3Q13615 1198 aa12.48□□□□□ -0.41
CCDC12-209ENST00000604164 MYBPC2Q14324 1141 aa12.48□□□□□ -0.41
CCDC12-209ENST00000604164 PTPN21Q16825 1174 aa12.48□□□□□ -0.41
CCDC12-209ENST00000604164 OVOS1Q6IE37 1185 aa12.48□□□□□ -0.41
CCDC12-209ENST00000604164 C12orf56Q8IXR9 622 aa12.48□□□□□ -0.41
CCDC12-209ENST00000604164 TCEAL8Q8IYN2 117 aa12.48□□□□□ -0.41
CCDC12-209ENST00000604164 UBALD2Q8IYN6 164 aa12.48□□□□□ -0.41
CCDC12-209ENST00000604164 THEM5Q8N1Q8 247 aa12.48□□□□□ -0.41
CCDC12-209ENST00000604164 ELMOD1Q8N336 334 aa12.48□□□□□ -0.41
CCDC12-209ENST00000604164 SCFD1Q8WVM8 642 aa12.48□□□□□ -0.41
CCDC12-209ENST00000604164 EDAQ92838 391 aa12.48□□□□□ -0.41
CCDC12-209ENST00000604164 HPS3Q969F9 1004 aa12.48□□□□□ -0.41
CCDC12-209ENST00000604164 NXPE3Q969Y0 559 aa12.48□□□□□ -0.41
CCDC12-209ENST00000604164 ZNF707Q96C28 371 aaPredicted RBP12.48□□□□□ -0.41
CCDC12-209ENST00000604164 ANKRD36BP1Q96IX9 119 aa12.48□□□□□ -0.41
CCDC12-209ENST00000604164 SENP8Q96LD8 212 aa12.48□□□□□ -0.41
CCDC12-209ENST00000604164 SLC39A2Q9NP94 309 aa12.48□□□□□ -0.41
CCDC12-209ENST00000604164 AGPAT3Q9NRZ7 376 aa12.48□□□□□ -0.41
CCDC12-209ENST00000604164 HSPBP1Q9NZL4 362 aa12.48□□□□□ -0.41
CCDC12-209ENST00000604164 AFF4Q9UHB7 1163 aaKnown RBP12.48□□□□□ -0.41
CCDC12-209ENST00000604164 HOOK1Q9UJC3 728 aaKnown RBP12.48□□□□□ -0.41
CCDC12-209ENST00000604164 CIZ1Q9ULV3 898 aaPredicted RBP12.48□□□□□ -0.41
CCDC12-209ENST00000604164 GOLGA8IPA6NC78 632 aa12.47□□□□□ -0.41
CCDC12-209ENST00000604164 GOLGA8JA6NMD2 632 aa12.47□□□□□ -0.41
CCDC12-209ENST00000604164 PRR33A8MZF0 331 aa12.47□□□□□ -0.41
CCDC12-209ENST00000604164 ZNF202O95125 648 aa12.47□□□□□ -0.41
CCDC12-209ENST00000604164 RPN1P04843 607 aaKnown RBP12.47□□□□□ -0.41
CCDC12-209ENST00000604164 CYP11A1P05108 521 aa12.47□□□□□ -0.41
CCDC12-209ENST00000604164 IGFBP6P24592 240 aaPredicted RBP12.47□□□□□ -0.41
CCDC12-209ENST00000604164 GBP2P32456 591 aaPredicted RBP12.47□□□□□ -0.41
CCDC12-209ENST00000604164 GUCY2FP51841 1108 aa12.47□□□□□ -0.41
CCDC12-209ENST00000604164 RBP5P82980 135 aa12.47□□□□□ -0.41
CCDC12-209ENST00000604164 SMARCB1Q12824 385 aa12.47□□□□□ -0.41
CCDC12-209ENST00000604164 MYO1EQ12965 1108 aa12.47□□□□□ -0.41
CCDC12-209ENST00000604164 PLD1Q13393 1074 aa12.47□□□□□ -0.41
CCDC12-209ENST00000604164 DUOXA2Q1HG44 320 aa12.47□□□□□ -0.41
CCDC12-209ENST00000604164 KMT5BQ4FZB7 885 aa12.47□□□□□ -0.41
CCDC12-209ENST00000604164 KRBA2Q6ZNG9 492 aa12.47□□□□□ -0.41
CCDC12-209ENST00000604164 NELFCDQ8IXH7 590 aa12.47□□□□□ -0.41
CCDC12-209ENST00000604164 EFCAB13Q8IY85 973 aa12.47□□□□□ -0.41
CCDC12-209ENST00000604164 GRAMD1CQ8IYS0 662 aa12.47□□□□□ -0.41
CCDC12-209ENST00000604164 LRRC52Q8N7C0 313 aa12.47□□□□□ -0.41
CCDC12-209ENST00000604164 XXYLT1Q8NBI6 393 aa12.47□□□□□ -0.41
CCDC12-209ENST00000604164 KHSRPQ92945 711 aaKnown RBP eCLIP12.47□□□□□ -0.41
CCDC12-209ENST00000604164 FNBP1Q96RU3 617 aa12.47□□□□□ -0.41
CCDC12-209ENST00000604164 GTPBP4Q9BZE4 634 aaKnown RBP12.47□□□□□ -0.41
CCDC12-209ENST00000604164 IKZF4Q9H2S9 585 aa12.47□□□□□ -0.41
CCDC12-209ENST00000604164 IGSF9Q9P2J2 1179 aa12.47□□□□□ -0.41
CCDC12-209ENST00000604164 CDH22Q9UJ99 828 aa12.47□□□□□ -0.41
CCDC12-209ENST00000604164 POLIQ9UNA4 740 aa12.47□□□□□ -0.41
CCDC12-209ENST00000604164 SORCS3Q9UPU3 1222 aa12.47□□□□□ -0.41
CCDC12-209ENST00000604164 SPTBN5Q9NRC6 3674 aaKnown RBP12.47□□□□□ -0.41
CCDC12-209ENST00000604164 MTCL1Q9Y4B5 1905 aaKnown RBP12.47□□□□□ -0.41
CCDC12-209ENST00000604164 PLXNA3P51805 1871 aa12.46□□□□□ -0.41
CCDC12-209ENST00000604164 WDR27A2RRH5 827 aa12.46□□□□□ -0.41
CCDC12-209ENST00000604164 KPNA7A9QM74 516 aa12.46□□□□□ -0.41
CCDC12-209ENST00000604164 CYB561D2O14569 222 aa12.46□□□□□ -0.41
CCDC12-209ENST00000604164 CCL16O15467 120 aa12.46□□□□□ -0.41
CCDC12-209ENST00000604164 TGFB1I1O43294 461 aa12.46□□□□□ -0.41
CCDC12-209ENST00000604164 KLRC4O43908 158 aa12.46□□□□□ -0.41
CCDC12-209ENST00000604164 FSHRP23945 695 aa12.46□□□□□ -0.41
CCDC12-209ENST00000604164 CASP1P29466 404 aa12.46□□□□□ -0.41
CCDC12-209ENST00000604164 HOXD13P35453 343 aa12.46□□□□□ -0.41
CCDC12-209ENST00000604164 ZXDAP98168 799 aa12.46□□□□□ -0.41
CCDC12-209ENST00000604164 SNRNP35Q16560 246 aaKnown RBP12.46□□□□□ -0.41
CCDC12-209ENST00000604164 RSPO2Q6UXX9 243 aaPredicted RBP12.46□□□□□ -0.41
CCDC12-209ENST00000604164 WDR49Q8IV35 697 aa12.46□□□□□ -0.41
CCDC12-209ENST00000604164 CSGALNACT2Q8N6G5 542 aa12.46□□□□□ -0.41
CCDC12-209ENST00000604164 GLIS3Q8NEA6 775 aa12.46□□□□□ -0.41
CCDC12-209ENST00000604164 SPATA18Q8TC71 538 aa12.46□□□□□ -0.41
CCDC12-209ENST00000604164 CYP4F11Q9HBI6 524 aa12.46□□□□□ -0.41
CCDC12-209ENST00000604164 PDE11AQ9HCR9 933 aa12.46□□□□□ -0.41
CCDC12-209ENST00000604164 EPS15L1Q9UBC2 864 aa12.46□□□□□ -0.41
CCDC12-209ENST00000604164 HSFX1Q9UBD0 423 aa12.46□□□□□ -0.41
CCDC12-209ENST00000604164 LIMD1Q9UGP4 676 aa12.46□□□□□ -0.41
CCDC12-209ENST00000604164 VWA8A3KMH1 1905 aa12.46□□□□□ -0.42
CCDC12-209ENST00000604164 ZNF197O14709 1029 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms