RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 C18orf25Q96B23 403 aaPredicted RBP19.41■□□□□ 0.7
SHKBP1-227ENST00000602011 ZBTB45Q96K62 511 aaPredicted RBP19.41■□□□□ 0.7
SHKBP1-227ENST00000602011 ASB16Q96NS5 453 aa19.41■□□□□ 0.7
SHKBP1-227ENST00000602011 KIF2CQ99661 725 aa19.41■□□□□ 0.7
SHKBP1-227ENST00000602011 ASAH2Q9NR71 780 aa19.41■□□□□ 0.7
SHKBP1-227ENST00000602011 ANKFY1Q9P2R3 1169 aa19.41■□□□□ 0.7
SHKBP1-227ENST00000602011 SPTBN2O15020 2390 aa19.4■□□□□ 0.7
SHKBP1-227ENST00000602011 TTC26A0AVF1 554 aa19.4■□□□□ 0.7
SHKBP1-227ENST00000602011 SEC24AO95486 1093 aa19.4■□□□□ 0.7
SHKBP1-227ENST00000602011 FGF19O95750 216 aa19.4■□□□□ 0.7
SHKBP1-227ENST00000602011 HARSP12081 509 aaKnown RBP19.4■□□□□ 0.7
SHKBP1-227ENST00000602011 CEBPBP17676 345 aa19.4■□□□□ 0.7
SHKBP1-227ENST00000602011 MATR3P43243 847 aaKnown RBP eCLIP19.4■□□□□ 0.7
SHKBP1-227ENST00000602011 CSTF1Q05048 431 aaKnown RBP19.4■□□□□ 0.7
SHKBP1-227ENST00000602011 ZRSR1Q15695 479 aaKnown RBP19.4■□□□□ 0.7
SHKBP1-227ENST00000602011 RSPO4Q2I0M5 234 aaPredicted RBP19.4■□□□□ 0.7
SHKBP1-227ENST00000602011 FAM78AQ5JUQ0 283 aa19.4■□□□□ 0.7
SHKBP1-227ENST00000602011 KCNK18Q7Z418 384 aa19.4■□□□□ 0.7
SHKBP1-227ENST00000602011 PLA2G2FQ9BZM2 168 aa19.4■□□□□ 0.7
SHKBP1-227ENST00000602011 HSFX1Q9UBD0 423 aa19.4■□□□□ 0.7
SHKBP1-227ENST00000602011 ASB3Q9Y575 518 aa19.4■□□□□ 0.7
SHKBP1-227ENST00000602011 H3BQV1 296 aa19.39■□□□□ 0.69
SHKBP1-227ENST00000602011 BMP15O95972 392 aa19.39■□□□□ 0.69
SHKBP1-227ENST00000602011 CPB1P15086 417 aa19.39■□□□□ 0.69
SHKBP1-227ENST00000602011 TYMPP19971 482 aa19.39■□□□□ 0.69
SHKBP1-227ENST00000602011 AARSP49588 968 aaKnown RBP eCLIP19.39■□□□□ 0.69
SHKBP1-227ENST00000602011 NCKAP1LP55160 1127 aa19.39■□□□□ 0.69
SHKBP1-227ENST00000602011 PPP2R3AQ06190 1150 aa19.39■□□□□ 0.69
SHKBP1-227ENST00000602011 TWF1Q12792 350 aa19.39■□□□□ 0.69
SHKBP1-227ENST00000602011 GPR17Q13304 367 aa19.39■□□□□ 0.69
SHKBP1-227ENST00000602011 MYBPC2Q14324 1141 aa19.39■□□□□ 0.69
SHKBP1-227ENST00000602011 TSSK4Q6SA08 328 aa19.39■□□□□ 0.69
SHKBP1-227ENST00000602011 HAUS6Q7Z4H7 955 aa19.39■□□□□ 0.69
SHKBP1-227ENST00000602011 MAP4K3Q8IVH8 894 aa19.39■□□□□ 0.69
SHKBP1-227ENST00000602011 MFSD6LQ8IWD5 586 aa19.39■□□□□ 0.69
SHKBP1-227ENST00000602011 BICD1Q96G01 975 aa19.39■□□□□ 0.69
SHKBP1-227ENST00000602011 CALML4Q96GE6 196 aa19.39■□□□□ 0.69
SHKBP1-227ENST00000602011 PNMA5Q96PV4 448 aa19.39■□□□□ 0.69
SHKBP1-227ENST00000602011 HEBP1Q9NRV9 189 aa19.39■□□□□ 0.69
SHKBP1-227ENST00000602011 DLL3Q9NYJ7 618 aa19.39■□□□□ 0.69
SHKBP1-227ENST00000602011 PATJQ8NI35 1801 aa19.39■□□□□ 0.69
SHKBP1-227ENST00000602011 F5P12259 2224 aa19.39■□□□□ 0.69
SHKBP1-227ENST00000602011 VWA3AA6NCI4 1184 aa19.38■□□□□ 0.69
SHKBP1-227ENST00000602011 PIGRP01833 764 aa19.38■□□□□ 0.69
SHKBP1-227ENST00000602011 ADRB2P07550 413 aa19.38■□□□□ 0.69
SHKBP1-227ENST00000602011 FCARP24071 287 aa19.38■□□□□ 0.69
SHKBP1-227ENST00000602011 TARSP26639 723 aaKnown RBP19.38■□□□□ 0.69
SHKBP1-227ENST00000602011 UBA7P41226 1012 aa19.38■□□□□ 0.69
SHKBP1-227ENST00000602011 MCM2P49736 904 aa19.38■□□□□ 0.69
SHKBP1-227ENST00000602011 LIG4P49917 911 aa19.38■□□□□ 0.69
SHKBP1-227ENST00000602011 EPHB3P54753 998 aa19.38■□□□□ 0.69
SHKBP1-227ENST00000602011 POU5F1Q01860 360 aaKnown RBP19.38■□□□□ 0.69
SHKBP1-227ENST00000602011 KIF12Q96FN5 646 aa19.38■□□□□ 0.69
SHKBP1-227ENST00000602011 RPF1Q9H9Y2 349 aaKnown RBP19.38■□□□□ 0.69
SHKBP1-227ENST00000602011 ZNF334Q9HCZ1 680 aaPredicted RBP19.38■□□□□ 0.69
SHKBP1-227ENST00000602011 ZNF263O14978 683 aa19.37■□□□□ 0.69
SHKBP1-227ENST00000602011 OGTO15294 1046 aa19.37■□□□□ 0.69
SHKBP1-227ENST00000602011 LILRB5O75023 590 aa19.37■□□□□ 0.69
SHKBP1-227ENST00000602011 ALDH1A3P47895 512 aa19.37■□□□□ 0.69
SHKBP1-227ENST00000602011 FZD5Q13467 585 aa19.37■□□□□ 0.69
SHKBP1-227ENST00000602011 TMEM119Q4V9L6 283 aa19.37■□□□□ 0.69
SHKBP1-227ENST00000602011 ARMCX5Q6P1M9 558 aa19.37■□□□□ 0.69
SHKBP1-227ENST00000602011 DSTYKQ6XUX3 929 aa19.37■□□□□ 0.69
SHKBP1-227ENST00000602011 TCEAL4Q96EI5 215 aa19.37■□□□□ 0.69
SHKBP1-227ENST00000602011 EPC1Q9H2F5 836 aa19.37■□□□□ 0.69
SHKBP1-227ENST00000602011 PRMT8Q9NR22 394 aaPredicted RBP19.37■□□□□ 0.69
SHKBP1-227ENST00000602011 CEP72Q9P209 647 aa19.37■□□□□ 0.69
SHKBP1-227ENST00000602011 NCDNQ9UBB6 729 aa19.37■□□□□ 0.69
SHKBP1-227ENST00000602011 TBX20Q9UMR3 447 aa19.37■□□□□ 0.69
SHKBP1-227ENST00000602011 DERAQ9Y315 318 aa19.37■□□□□ 0.69
SHKBP1-227ENST00000602011 TRIP11Q15643 1979 aa19.37■□□□□ 0.69
SHKBP1-227ENST00000602011 NRG2O14511 850 aaPredicted RBP19.36■□□□□ 0.69
SHKBP1-227ENST00000602011 HNRNPDLO14979 420 aaKnown RBP19.36■□□□□ 0.69
SHKBP1-227ENST00000602011 MEFVO15553 781 aaPredicted RBP19.36■□□□□ 0.69
SHKBP1-227ENST00000602011 CXCL8P10145 99 aa19.36■□□□□ 0.69
SHKBP1-227ENST00000602011 MYL4P12829 197 aa19.36■□□□□ 0.69
SHKBP1-227ENST00000602011 GDI1P31150 447 aa19.36■□□□□ 0.69
SHKBP1-227ENST00000602011 RAD51AP2Q09MP3 1159 aa19.36■□□□□ 0.69
SHKBP1-227ENST00000602011 SMARCB1Q12824 385 aa19.36■□□□□ 0.69
SHKBP1-227ENST00000602011 RNF19BQ6ZMZ0 732 aa19.36■□□□□ 0.69
SHKBP1-227ENST00000602011 FAM3CQ92520 227 aa19.36■□□□□ 0.69
SHKBP1-227ENST00000602011 CHRDQ9H2X0 955 aa19.36■□□□□ 0.69
SHKBP1-227ENST00000602011 C8orf33Q9H7E9 229 aaPredicted RBP19.36■□□□□ 0.69
SHKBP1-227ENST00000602011 PARVGQ9HBI0 331 aa19.36■□□□□ 0.69
SHKBP1-227ENST00000602011 TUBGCP4Q9UGJ1 667 aa19.36■□□□□ 0.69
SHKBP1-227ENST00000602011 ZMYM5Q9UJ78 669 aa19.36■□□□□ 0.69
SHKBP1-227ENST00000602011 DSEQ9UL01 958 aa19.36■□□□□ 0.69
SHKBP1-227ENST00000602011 SHISA7A6NL88 538 aa19.35■□□□□ 0.69
SHKBP1-227ENST00000602011 PRR5-ARHGAP8B1AHC4 643 aa19.35■□□□□ 0.69
SHKBP1-227ENST00000602011 CCR2P41597 374 aa19.35■□□□□ 0.69
SHKBP1-227ENST00000602011 TUFMP49411 452 aaKnown RBP19.35■□□□□ 0.69
SHKBP1-227ENST00000602011 CCR3P51677 355 aa19.35■□□□□ 0.69
SHKBP1-227ENST00000602011 ZNF131P52739 623 aa19.35■□□□□ 0.69
SHKBP1-227ENST00000602011 ARHGAP8P85298 464 aa19.35■□□□□ 0.69
SHKBP1-227ENST00000602011 ARSHQ5FYA8 562 aa19.35■□□□□ 0.69
SHKBP1-227ENST00000602011 SPATA1Q5VX52 437 aa19.35■□□□□ 0.69
SHKBP1-227ENST00000602011 OVOS1Q6IE37 1185 aa19.35■□□□□ 0.69
SHKBP1-227ENST00000602011 SLFN12LQ6IEE8 588 aa19.35■□□□□ 0.69
SHKBP1-227ENST00000602011 ITIH5Q86UX2 942 aa19.35■□□□□ 0.69
SHKBP1-227ENST00000602011 YAF2Q8IY57 180 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms