RNA–Protein interactions for RNA: ENST00000601849.1

VRK3-224, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-224ENST00000601849 ASB3Q9Y575 518 aa10.44□□□□□ -0.74
VRK3-224ENST00000601849 PIAS3Q9Y6X2 628 aa10.44□□□□□ -0.74
VRK3-224ENST00000601849 MIA3Q5JRA6 1907 aa10.43□□□□□ -0.74
VRK3-224ENST00000601849 MYH15Q9Y2K3 1946 aa10.43□□□□□ -0.74
VRK3-224ENST00000601849 GVINP1Q7Z2Y8 2422 aa10.43□□□□□ -0.74
VRK3-224ENST00000601849 SFI1A8K8P3 1242 aa10.43□□□□□ -0.74
VRK3-224ENST00000601849 CHADO15335 359 aa10.43□□□□□ -0.74
VRK3-224ENST00000601849 OAZ2O95190 189 aa10.43□□□□□ -0.74
VRK3-224ENST00000601849 CYP3A5P20815 502 aa10.43□□□□□ -0.74
VRK3-224ENST00000601849 IGFBP6P24592 240 aaPredicted RBP10.43□□□□□ -0.74
VRK3-224ENST00000601849 LIG4P49917 911 aa10.43□□□□□ -0.74
VRK3-224ENST00000601849 PPP2R3AQ06190 1150 aa10.43□□□□□ -0.74
VRK3-224ENST00000601849 TAF12Q16514 161 aa10.43□□□□□ -0.74
VRK3-224ENST00000601849 SLC10A6Q3KNW5 377 aa10.43□□□□□ -0.74
VRK3-224ENST00000601849 ARHGAP15Q53QZ3 475 aa10.43□□□□□ -0.74
VRK3-224ENST00000601849 RILPL1Q5EBL4 403 aa10.43□□□□□ -0.74
VRK3-224ENST00000601849 MCTP1Q6DN14 999 aa10.43□□□□□ -0.74
VRK3-224ENST00000601849 VITQ6UXI7 678 aa10.43□□□□□ -0.74
VRK3-224ENST00000601849 ITIH5Q86UX2 942 aa10.43□□□□□ -0.74
VRK3-224ENST00000601849 MAP4K3Q8IVH8 894 aa10.43□□□□□ -0.74
VRK3-224ENST00000601849 CD302Q8IX05 232 aa10.43□□□□□ -0.74
VRK3-224ENST00000601849 SYT2Q8N9I0 419 aaPredicted RBP10.43□□□□□ -0.74
VRK3-224ENST00000601849 NELL1Q92832 810 aa10.43□□□□□ -0.74
VRK3-224ENST00000601849 C18orf25Q96B23 403 aaPredicted RBP10.43□□□□□ -0.74
VRK3-224ENST00000601849 TCEAL4Q96EI5 215 aa10.43□□□□□ -0.74
VRK3-224ENST00000601849 KIF12Q96FN5 646 aa10.43□□□□□ -0.74
VRK3-224ENST00000601849 RTKNQ9BST9 563 aa10.43□□□□□ -0.74
VRK3-224ENST00000601849 CHRDQ9H2X0 955 aa10.43□□□□□ -0.74
VRK3-224ENST00000601849 PRMT8Q9NR22 394 aaPredicted RBP10.43□□□□□ -0.74
VRK3-224ENST00000601849 PCDHB6Q9Y5E3 794 aa10.43□□□□□ -0.74
VRK3-224ENST00000601849 MED19A0JLT2 244 aaPredicted RBP10.42□□□□□ -0.74
VRK3-224ENST00000601849 HEPACAM2A8MVW5 462 aa10.42□□□□□ -0.74
VRK3-224ENST00000601849 M0QZQ0 153 aa10.42□□□□□ -0.74
VRK3-224ENST00000601849 LRP3O75074 770 aa10.42□□□□□ -0.74
VRK3-224ENST00000601849 FCARP24071 287 aa10.42□□□□□ -0.74
VRK3-224ENST00000601849 CCNE1P24864 410 aa10.42□□□□□ -0.74
VRK3-224ENST00000601849 LRPAP1P30533 357 aa10.42□□□□□ -0.74
VRK3-224ENST00000601849 TUFMP49411 452 aaKnown RBP10.42□□□□□ -0.74
VRK3-224ENST00000601849 EPHA5P54756 1037 aa10.42□□□□□ -0.74
VRK3-224ENST00000601849 MCL1Q07820 350 aa10.42□□□□□ -0.74
VRK3-224ENST00000601849 RAD51AP2Q09MP3 1159 aa10.42□□□□□ -0.74
VRK3-224ENST00000601849 DUSP4Q13115 394 aa10.42□□□□□ -0.74
VRK3-224ENST00000601849 GPR17Q13304 367 aa10.42□□□□□ -0.74
VRK3-224ENST00000601849 VEPH1Q14D04 833 aa10.42□□□□□ -0.74
VRK3-224ENST00000601849 ARHGAP29Q52LW3 1261 aa10.42□□□□□ -0.74
VRK3-224ENST00000601849 DGKKQ5KSL6 1271 aa10.42□□□□□ -0.74
VRK3-224ENST00000601849 ERICH6BQ5W0A0 696 aa10.42□□□□□ -0.74
VRK3-224ENST00000601849 LAIR1Q6GTX8 287 aa10.42□□□□□ -0.74
VRK3-224ENST00000601849 RNF19BQ6ZMZ0 732 aa10.42□□□□□ -0.74
VRK3-224ENST00000601849 PRR23BQ6ZRT6 265 aa10.42□□□□□ -0.74
VRK3-224ENST00000601849 METTL23Q86XA0 190 aa10.42□□□□□ -0.74
VRK3-224ENST00000601849 HS6ST3Q8IZP7 471 aa10.42□□□□□ -0.74
VRK3-224ENST00000601849 DAW1Q8N136 415 aa10.42□□□□□ -0.74
VRK3-224ENST00000601849 TMEM161BQ8NDZ6 487 aa10.42□□□□□ -0.74
VRK3-224ENST00000601849 BEST2Q8NFU1 509 aa10.42□□□□□ -0.74
VRK3-224ENST00000601849 EXOC4Q96A65 974 aa10.42□□□□□ -0.74
VRK3-224ENST00000601849 CALML4Q96GE6 196 aa10.42□□□□□ -0.74
VRK3-224ENST00000601849 ZBTB45Q96K62 511 aaPredicted RBP10.42□□□□□ -0.74
VRK3-224ENST00000601849 GCNAQ96QF7 691 aa10.42□□□□□ -0.74
VRK3-224ENST00000601849 RUSC1Q9BVN2 902 aa10.42□□□□□ -0.74
VRK3-224ENST00000601849 RPF1Q9H9Y2 349 aaKnown RBP10.42□□□□□ -0.74
VRK3-224ENST00000601849 THG1LQ9NWX6 298 aaKnown RBP10.42□□□□□ -0.74
VRK3-224ENST00000601849 EP300Q09472 2414 aaPredicted RBP10.42□□□□□ -0.74
VRK3-224ENST00000601849 A0A1W2PRU2 124 aa10.41□□□□□ -0.74
VRK3-224ENST00000601849 H3BQV1 296 aa10.41□□□□□ -0.74
VRK3-224ENST00000601849 SLC26A4O43511 780 aa10.41□□□□□ -0.74
VRK3-224ENST00000601849 KRT18P05783 430 aaKnown RBP10.41□□□□□ -0.74
VRK3-224ENST00000601849 RETP07949 1114 aa10.41□□□□□ -0.74
VRK3-224ENST00000601849 PLA2G4BP0C869 781 aa10.41□□□□□ -0.74
VRK3-224ENST00000601849 CXCL8P10145 99 aa10.41□□□□□ -0.74
VRK3-224ENST00000601849 MAPTP10636 758 aaKnown RBP10.41□□□□□ -0.74
VRK3-224ENST00000601849 ODC1P11926 461 aa10.41□□□□□ -0.74
VRK3-224ENST00000601849 CDC25AP30304 524 aa10.41□□□□□ -0.74
VRK3-224ENST00000601849 UBA7P41226 1012 aa10.41□□□□□ -0.74
VRK3-224ENST00000601849 VIPR2P41587 438 aa10.41□□□□□ -0.74
VRK3-224ENST00000601849 CCR2P41597 374 aa10.41□□□□□ -0.74
VRK3-224ENST00000601849 ATXN1P54253 815 aaKnown RBP10.41□□□□□ -0.74
VRK3-224ENST00000601849 PLCB2Q00722 1185 aa10.41□□□□□ -0.74
VRK3-224ENST00000601849 AMPD2Q01433 879 aa10.41□□□□□ -0.74
VRK3-224ENST00000601849 FZD5Q13467 585 aa10.41□□□□□ -0.74
VRK3-224ENST00000601849 SIM2Q14190 667 aaPredicted RBP10.41□□□□□ -0.74
VRK3-224ENST00000601849 MYBPC2Q14324 1141 aa10.41□□□□□ -0.74
VRK3-224ENST00000601849 NBR1Q14596 966 aa10.41□□□□□ -0.74
VRK3-224ENST00000601849 TEAD2Q15562 447 aa10.41□□□□□ -0.74
VRK3-224ENST00000601849 SEZ6Q53EL9 994 aa10.41□□□□□ -0.74
VRK3-224ENST00000601849 OVOS1Q6IE37 1185 aa10.41□□□□□ -0.74
VRK3-224ENST00000601849 RALGPS2Q86X27 583 aaPredicted RBP10.41□□□□□ -0.74
VRK3-224ENST00000601849 THEM5Q8N1Q8 247 aa10.41□□□□□ -0.74
VRK3-224ENST00000601849 SYNPOQ8N3V7 929 aa10.41□□□□□ -0.74
VRK3-224ENST00000601849 SPEM1Q8N4L4 309 aa10.41□□□□□ -0.74
VRK3-224ENST00000601849 RASSF8Q8NHQ8 419 aa10.41□□□□□ -0.74
VRK3-224ENST00000601849 DDX1Q92499 740 aaKnown RBP10.41□□□□□ -0.74
VRK3-224ENST00000601849 FAM212AQ96EL1 285 aa10.41□□□□□ -0.74
VRK3-224ENST00000601849 ZSWIM3Q96MP5 696 aa10.41□□□□□ -0.74
VRK3-224ENST00000601849 PGLYRP2Q96PD5 576 aa10.41□□□□□ -0.74
VRK3-224ENST00000601849 ATXN3LQ9H3M9 355 aa10.41□□□□□ -0.74
VRK3-224ENST00000601849 CEP72Q9P209 647 aa10.41□□□□□ -0.74
VRK3-224ENST00000601849 HSFX1Q9UBD0 423 aa10.41□□□□□ -0.74
VRK3-224ENST00000601849 ZMYM5Q9UJ78 669 aa10.41□□□□□ -0.74
VRK3-224ENST00000601849 DSEQ9UL01 958 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms