RNA–Protein interactions for RNA: ENST00000600898.1

USF2-214, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 2

Gene USF2, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-214ENST00000600898 NXF1Q9UBU9 619 aaKnown RBP16.47■□□□□ 0.23
USF2-214ENST00000600898 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.47■□□□□ 0.236e-9■□□□□ 8.7
USF2-214ENST00000600898 NR2E3Q9Y5X4 410 aa16.47■□□□□ 0.23
USF2-214ENST00000600898 RANBP2P49792 3224 aaKnown RBP16.46■□□□□ 0.23
USF2-214ENST00000600898 ZBBXA8MT70 800 aa16.46■□□□□ 0.23
USF2-214ENST00000600898 ESPNB1AK53 854 aa16.46■□□□□ 0.23
USF2-214ENST00000600898 AKR1B15C9JRZ8 316 aaPredicted RBP16.46■□□□□ 0.23
USF2-214ENST00000600898 PODXLO00592 558 aa16.46■□□□□ 0.23
USF2-214ENST00000600898 PFKMP08237 780 aa16.46■□□□□ 0.23
USF2-214ENST00000600898 PLEKP08567 350 aaPredicted RBP16.46■□□□□ 0.23
USF2-214ENST00000600898 SKILP12757 684 aa16.46■□□□□ 0.23
USF2-214ENST00000600898 MAGEA10P43363 369 aaPredicted RBP16.46■□□□□ 0.23
USF2-214ENST00000600898 BRCC3P46736 316 aa16.46■□□□□ 0.23
USF2-214ENST00000600898 TUSC3Q13454 348 aa16.46■□□□□ 0.23
USF2-214ENST00000600898 UPP1Q16831 310 aa16.46■□□□□ 0.23
USF2-214ENST00000600898 BCL7CQ8WUZ0 217 aaPredicted RBP16.46■□□□□ 0.23
USF2-214ENST00000600898 ZNF689Q96CS4 500 aaPredicted RBP16.46■□□□□ 0.23
USF2-214ENST00000600898 CWH43Q9H720 699 aa16.46■□□□□ 0.23
USF2-214ENST00000600898 HMGXB4Q9UGU5 601 aa16.46■□□□□ 0.23
USF2-214ENST00000600898 KIAA1671Q9BY89 1806 aa16.45■□□□□ 0.22
USF2-214ENST00000600898 F8VZ95 297 aa16.45■□□□□ 0.22
USF2-214ENST00000600898 ZC3H11AO75152 810 aaKnown RBP eCLIP16.45■□□□□ 0.22
USF2-214ENST00000600898 AMHP03971 560 aa16.45■□□□□ 0.22
USF2-214ENST00000600898 SLC11A1P49279 550 aa16.45■□□□□ 0.22
USF2-214ENST00000600898 LILRA4P59901 499 aa16.45■□□□□ 0.22
USF2-214ENST00000600898 ZBED6P86452 979 aa16.45■□□□□ 0.22
USF2-214ENST00000600898 CETN1Q12798 172 aa16.45■□□□□ 0.22
USF2-214ENST00000600898 ORC1Q13415 861 aa16.45■□□□□ 0.22
USF2-214ENST00000600898 CUL2Q13617 745 aa16.45■□□□□ 0.22
USF2-214ENST00000600898 WDR72Q3MJ13 1102 aa16.45■□□□□ 0.22
USF2-214ENST00000600898 WDR44Q5JSH3 913 aa16.45■□□□□ 0.22
USF2-214ENST00000600898 FAM109BQ6ICB4 259 aaPredicted RBP16.45■□□□□ 0.22
USF2-214ENST00000600898 OSTM1Q86WC4 334 aa16.45■□□□□ 0.22
USF2-214ENST00000600898 TMEM173Q86WV6 379 aaPredicted RBP16.45■□□□□ 0.22
USF2-214ENST00000600898 HERVK_113Q902F9 699 aa16.45■□□□□ 0.22
USF2-214ENST00000600898 SHC3Q92529 594 aa16.45■□□□□ 0.22
USF2-214ENST00000600898 TWNKQ96RR1 684 aa16.45■□□□□ 0.22
USF2-214ENST00000600898 TSPAN18Q96SJ8 248 aa16.45■□□□□ 0.22
USF2-214ENST00000600898 DNAJC7Q99615 494 aa16.45■□□□□ 0.22
USF2-214ENST00000600898 CHP1Q99653 195 aa16.45■□□□□ 0.22
USF2-214ENST00000600898 LPIN3Q9BQK8 851 aa16.45■□□□□ 0.22
USF2-214ENST00000600898 MRPL45Q9BRJ2 306 aaKnown RBP16.45■□□□□ 0.22
USF2-214ENST00000600898 NUP58Q9BVL2 599 aa16.45■□□□□ 0.22
USF2-214ENST00000600898 STK33Q9BYT3 514 aa16.45■□□□□ 0.22
USF2-214ENST00000600898 BCO2Q9BYV7 579 aa16.45■□□□□ 0.22
USF2-214ENST00000600898 NIF3L1Q9GZT8 377 aa16.45■□□□□ 0.22
USF2-214ENST00000600898 VRTNQ9H8Y1 702 aa16.45■□□□□ 0.22
USF2-214ENST00000600898 ABHD10Q9NUJ1 306 aa16.45■□□□□ 0.22
USF2-214ENST00000600898 FBXL5Q9UKA1 691 aa16.45■□□□□ 0.22
USF2-214ENST00000600898 ZKSCAN5Q9Y2L8 839 aa16.45■□□□□ 0.22
USF2-214ENST00000600898 LUC7L2Q9Y383 392 aaKnown RBP16.45■□□□□ 0.22
USF2-214ENST00000600898 NT5C1B-RDH14C9J2C7 533 aa16.44■□□□□ 0.22
USF2-214ENST00000600898 GFPT2O94808 682 aa16.44■□□□□ 0.22
USF2-214ENST00000600898 BAIAP3O94812 1187 aa16.44■□□□□ 0.22
USF2-214ENST00000600898 ARHGEF15O94989 841 aa16.44■□□□□ 0.22
USF2-214ENST00000600898 KIF4AO95239 1232 aa16.44■□□□□ 0.22
USF2-214ENST00000600898 STAU1O95793 577 aaKnown RBP16.44■□□□□ 0.22
USF2-214ENST00000600898 PTMAP06454 111 aaKnown RBP16.44■□□□□ 0.22
USF2-214ENST00000600898 CCZ1BP86790 482 aa16.44■□□□□ 0.22
USF2-214ENST00000600898 CCZ1P86791 482 aaPredicted RBP16.44■□□□□ 0.22
USF2-214ENST00000600898 SOWAHAQ2M3V2 549 aa16.44■□□□□ 0.22
USF2-214ENST00000600898 TIGD5Q53EQ6 642 aa16.44■□□□□ 0.22
USF2-214ENST00000600898 ZNF667Q5HYK9 610 aa16.44■□□□□ 0.22
USF2-214ENST00000600898 RASIP1Q5U651 963 aa16.44■□□□□ 0.22
USF2-214ENST00000600898 HGSNATQ68CP4 663 aa16.44■□□□□ 0.22
USF2-214ENST00000600898 LIMS2Q7Z4I7 341 aa16.44■□□□□ 0.22
USF2-214ENST00000600898 IRF2BP2Q7Z5L9 587 aa16.44■□□□□ 0.22
USF2-214ENST00000600898 LRRC52Q8N7C0 313 aa16.44■□□□□ 0.22
USF2-214ENST00000600898 URGCPQ8TCY9 931 aa16.44■□□□□ 0.22
USF2-214ENST00000600898 WHAMMQ8TF30 809 aa16.44■□□□□ 0.22
USF2-214ENST00000600898 PRO3102Q9H379 93 aa16.44■□□□□ 0.22
USF2-214ENST00000600898 SLC38A7Q9NVC3 462 aa16.44■□□□□ 0.22
USF2-214ENST00000600898 MARCH5Q9NX47 278 aa16.44■□□□□ 0.22
USF2-214ENST00000600898 PRG3Q9Y2Y8 225 aaPredicted RBP16.44■□□□□ 0.22
USF2-214ENST00000600898 TSC2P49815 1807 aa16.43■□□□□ 0.22
USF2-214ENST00000600898 FAM170AA1A519 330 aa16.43■□□□□ 0.22
USF2-214ENST00000600898 LCHNA4D1U4 455 aa16.43■□□□□ 0.22
USF2-214ENST00000600898 GRXCR1A8MXD5 290 aa16.43■□□□□ 0.22
USF2-214ENST00000600898 LINC00271P0C7V0 271 aa16.43■□□□□ 0.22
USF2-214ENST00000600898 CD58P19256 250 aa16.43■□□□□ 0.22
USF2-214ENST00000600898 FECHP22830 423 aa16.43■□□□□ 0.22
USF2-214ENST00000600898 ATICP31939 592 aa16.43■□□□□ 0.22
USF2-214ENST00000600898 CLCN1P35523 988 aa16.43■□□□□ 0.22
USF2-214ENST00000600898 GCNT1Q02742 428 aa16.43■□□□□ 0.22
USF2-214ENST00000600898 ARID5AQ03989 594 aa16.43■□□□□ 0.22
USF2-214ENST00000600898 TRIM14Q14142 442 aa16.43■□□□□ 0.22
USF2-214ENST00000600898 MTF1Q14872 753 aa16.43■□□□□ 0.22
USF2-214ENST00000600898 SHHQ15465 462 aa16.43■□□□□ 0.22
USF2-214ENST00000600898 CCDC142Q17RM4 750 aa16.43■□□□□ 0.22
USF2-214ENST00000600898 CACNA2D4Q7Z3S7 1137 aa16.43■□□□□ 0.22
USF2-214ENST00000600898 SPRED2Q7Z698 418 aa16.43■□□□□ 0.22
USF2-214ENST00000600898 LRRC8AQ8IWT6 810 aa16.43■□□□□ 0.22
USF2-214ENST00000600898 KBTBD7Q8WVZ9 684 aa16.43■□□□□ 0.22
USF2-214ENST00000600898 TAF4BQ92750 862 aa16.43■□□□□ 0.22
USF2-214ENST00000600898 ZSWIM1Q9BR11 485 aa16.43■□□□□ 0.22
USF2-214ENST00000600898 EDEM3Q9BZQ6 932 aa16.43■□□□□ 0.22
USF2-214ENST00000600898 L1RE1Q9UN81 338 aa16.43■□□□□ 0.22
USF2-214ENST00000600898 TIMM13Q9Y5L4 95 aaPredicted RBP16.43■□□□□ 0.22
USF2-214ENST00000600898 SNX9Q9Y5X1 595 aa16.43■□□□□ 0.22
USF2-214ENST00000600898 MRPL42Q9Y6G3 142 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms