RNA–Protein interactions for RNA: ENST00000600190.1

FARP1-229, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-229ENST00000600190 BRD9Q9H8M2 597 aa20.54■□□□□ 0.88
FARP1-229ENST00000600190 CCDC39Q9UFE4 941 aa20.54■□□□□ 0.88
FARP1-229ENST00000600190 TUBGCP4Q9UGJ1 667 aa20.54■□□□□ 0.88
FARP1-229ENST00000600190 KCNG1Q9UIX4 513 aa20.54■□□□□ 0.88
FARP1-229ENST00000600190 MRPS17Q9Y2R5 130 aaKnown RBP20.54■□□□□ 0.88
FARP1-229ENST00000600190 SRPRBQ9Y5M8 271 aaKnown RBP20.54■□□□□ 0.88
FARP1-229ENST00000600190 PATJQ8NI35 1801 aa20.53■□□□□ 0.88
FARP1-229ENST00000600190 SPTLC2O15270 562 aa20.53■□□□□ 0.88
FARP1-229ENST00000600190 CLDN3O15551 220 aa20.53■□□□□ 0.88
FARP1-229ENST00000600190 YEATS4O95619 227 aa20.53■□□□□ 0.88
FARP1-229ENST00000600190 CPB1P15086 417 aa20.53■□□□□ 0.88
FARP1-229ENST00000600190 FCARP24071 287 aa20.53■□□□□ 0.88
FARP1-229ENST00000600190 SPAG1Q07617 926 aa20.53■□□□□ 0.88
FARP1-229ENST00000600190 TWF1Q12792 350 aa20.53■□□□□ 0.88
FARP1-229ENST00000600190 TMEM130Q8N3G9 435 aa20.53■□□□□ 0.88
FARP1-229ENST00000600190 KRI1Q8N9T8 703 aaKnown RBP20.53■□□□□ 0.88
FARP1-229ENST00000600190 CLDN23Q96B33 292 aa20.53■□□□□ 0.88
FARP1-229ENST00000600190 ZSWIM3Q96MP5 696 aa20.53■□□□□ 0.88
FARP1-229ENST00000600190 TRMT61BQ9BVS5 477 aaKnown RBP20.53■□□□□ 0.88
FARP1-229ENST00000600190 PPP6R2O75170 966 aa20.52■□□□□ 0.88
FARP1-229ENST00000600190 MICAL2O94851 1124 aa20.52■□□□□ 0.88
FARP1-229ENST00000600190 CXCL8P10145 99 aa20.52■□□□□ 0.88
FARP1-229ENST00000600190 MAPTP10636 758 aaKnown RBP20.52■□□□□ 0.88
FARP1-229ENST00000600190 MYL4P12829 197 aa20.52■□□□□ 0.88
FARP1-229ENST00000600190 NASPP49321 788 aaPredicted RBP20.52■□□□□ 0.88
FARP1-229ENST00000600190 KRT85P78386 507 aa20.52■□□□□ 0.88
FARP1-229ENST00000600190 PKP1Q13835 747 aa20.52■□□□□ 0.88
FARP1-229ENST00000600190 PTPAQ15257 358 aa20.52■□□□□ 0.88
FARP1-229ENST00000600190 TSSK4Q6SA08 328 aa20.52■□□□□ 0.88
FARP1-229ENST00000600190 RNF19BQ6ZMZ0 732 aa20.52■□□□□ 0.88
FARP1-229ENST00000600190 DGLUCYQ7Z3D6 616 aa20.52■□□□□ 0.88
FARP1-229ENST00000600190 SYT2Q8N9I0 419 aaPredicted RBP20.52■□□□□ 0.88
FARP1-229ENST00000600190 DNASE1L2Q92874 299 aa20.52■□□□□ 0.88
FARP1-229ENST00000600190 ASB16Q96NS5 453 aa20.52■□□□□ 0.88
FARP1-229ENST00000600190 PNMA5Q96PV4 448 aa20.52■□□□□ 0.88
FARP1-229ENST00000600190 CEP72Q9P209 647 aa20.52■□□□□ 0.88
FARP1-229ENST00000600190 AFF4Q9UHB7 1163 aaKnown RBP20.52■□□□□ 0.88
FARP1-229ENST00000600190 NDRG2Q9UN36 371 aaKnown RBP20.52■□□□□ 0.88
FARP1-229ENST00000600190 PCDHB8Q9UN66 801 aa20.52■□□□□ 0.88
FARP1-229ENST00000600190 PCDHGA2Q9Y5H1 932 aa20.52■□□□□ 0.88
FARP1-229ENST00000600190 NRG2O14511 850 aaPredicted RBP20.51■□□□□ 0.87
FARP1-229ENST00000600190 SPTLC1O15269 473 aa20.51■□□□□ 0.87
FARP1-229ENST00000600190 GJA1P17302 382 aa20.51■□□□□ 0.87
FARP1-229ENST00000600190 RPS9P46781 194 aaKnown RBP20.51■□□□□ 0.87
FARP1-229ENST00000600190 CACNB1Q02641 598 aaPredicted RBP20.51■□□□□ 0.87
FARP1-229ENST00000600190 ZPBP2Q6X784 338 aa20.51■□□□□ 0.87
FARP1-229ENST00000600190 LINC00301Q8NCQ3 95 aa20.51■□□□□ 0.87
FARP1-229ENST00000600190 SMARCD2Q92925 531 aa20.51■□□□□ 0.87
FARP1-229ENST00000600190 IRF7Q92985 503 aa20.51■□□□□ 0.87
FARP1-229ENST00000600190 BICD1Q96G01 975 aa20.51■□□□□ 0.87
FARP1-229ENST00000600190 BORCS6Q96GS4 357 aa20.51■□□□□ 0.87
FARP1-229ENST00000600190 ZSCAN32Q9NX65 697 aa20.51■□□□□ 0.87
FARP1-229ENST00000600190 NCDNQ9UBB6 729 aa20.51■□□□□ 0.87
FARP1-229ENST00000600190 MAFFQ9ULX9 164 aa20.51■□□□□ 0.87
FARP1-229ENST00000600190 TIMM13Q9Y5L4 95 aaPredicted RBP20.51■□□□□ 0.87
FARP1-229ENST00000600190 MORC2Q9Y6X9 1032 aaPredicted RBP20.51■□□□□ 0.87
FARP1-229ENST00000600190 MYH11P35749 1972 aa20.51■□□□□ 0.87
FARP1-229ENST00000600190 TCHHQ07283 1943 aa20.51■□□□□ 0.87
FARP1-229ENST00000600190 OTOGLQ3ZCN5 2332 aa20.5■□□□□ 0.87
FARP1-229ENST00000600190 NPHP3-ACAD11A0A0J9YXS1 232 aa20.5■□□□□ 0.87
FARP1-229ENST00000600190 SHISA7A6NL88 538 aa20.5■□□□□ 0.87
FARP1-229ENST00000600190 PLA2G4BP0C869 781 aa20.5■□□□□ 0.87
FARP1-229ENST00000600190 GDI1P31150 447 aa20.5■□□□□ 0.87
FARP1-229ENST00000600190 VIPR2P41587 438 aa20.5■□□□□ 0.87
FARP1-229ENST00000600190 SLC12A3P55017 1021 aa20.5■□□□□ 0.87
FARP1-229ENST00000600190 YWHAHQ04917 246 aaPredicted RBP20.5■□□□□ 0.87
FARP1-229ENST00000600190 MCL1Q07820 350 aa20.5■□□□□ 0.87
FARP1-229ENST00000600190 MTAPQ13126 283 aa20.5■□□□□ 0.87
FARP1-229ENST00000600190 FZD5Q13467 585 aa20.5■□□□□ 0.87
FARP1-229ENST00000600190 HYIQ5T013 277 aa20.5■□□□□ 0.87
FARP1-229ENST00000600190 KIF12Q96FN5 646 aa20.5■□□□□ 0.87
FARP1-229ENST00000600190 HAPLN2Q9GZV7 340 aa20.5■□□□□ 0.87
FARP1-229ENST00000600190 PLEKHA5Q9HAU0 1116 aa20.5■□□□□ 0.87
FARP1-229ENST00000600190 ASAH2Q9NR71 780 aa20.5■□□□□ 0.87
FARP1-229ENST00000600190 CACNA1AO00555 2505 aa20.5■□□□□ 0.87
FARP1-229ENST00000600190 PDCD11Q14690 1871 aaKnown RBP20.5■□□□□ 0.87
FARP1-229ENST00000600190 MAN2B1O00754 1011 aa20.49■□□□□ 0.87
FARP1-229ENST00000600190 MOSPD3O75425 235 aa20.49■□□□□ 0.87
FARP1-229ENST00000600190 CLTAP09496 248 aa20.49■□□□□ 0.87
FARP1-229ENST00000600190 OR4Q2P0C623 313 aa20.49■□□□□ 0.87
FARP1-229ENST00000600190 PSMC3P17980 439 aa20.49■□□□□ 0.87
FARP1-229ENST00000600190 ME1P48163 572 aa20.49■□□□□ 0.87
FARP1-229ENST00000600190 DNM1Q05193 864 aaKnown RBP20.49■□□□□ 0.87
FARP1-229ENST00000600190 PUM1Q14671 1186 aaKnown RBP eCLIP20.49■□□□□ 0.87
FARP1-229ENST00000600190 VITQ6UXI7 678 aa20.49■□□□□ 0.87
FARP1-229ENST00000600190 ZBTB44Q8NCP5 570 aa20.49■□□□□ 0.87
FARP1-229ENST00000600190 ZSCAN18Q8TBC5 510 aaPredicted RBP20.49■□□□□ 0.87
FARP1-229ENST00000600190 PGLYRP2Q96PD5 576 aa20.49■□□□□ 0.87
FARP1-229ENST00000600190 SLITRK6Q9H5Y7 841 aa20.49■□□□□ 0.87
FARP1-229ENST00000600190 ZNF334Q9HCZ1 680 aaPredicted RBP20.49■□□□□ 0.87
FARP1-229ENST00000600190 KCND2Q9NZV8 630 aa20.49■□□□□ 0.87
FARP1-229ENST00000600190 LARSQ9P2J5 1176 aaKnown RBP20.49■□□□□ 0.87
FARP1-229ENST00000600190 M0QZQ0 153 aa20.48■□□□□ 0.87
FARP1-229ENST00000600190 CUTAO60888 179 aa20.48■□□□□ 0.87
FARP1-229ENST00000600190 OAZ2O95190 189 aa20.48■□□□□ 0.87
FARP1-229ENST00000600190 TNFSF9P41273 254 aa20.48■□□□□ 0.87
FARP1-229ENST00000600190 PPP2R3AQ06190 1150 aa20.48■□□□□ 0.87
FARP1-229ENST00000600190 TEAD2Q15562 447 aa20.48■□□□□ 0.87
FARP1-229ENST00000600190 DSTYKQ6XUX3 929 aa20.48■□□□□ 0.87
FARP1-229ENST00000600190 USP37Q86T82 979 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms