RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 YWHAHQ04917 246 aaPredicted RBP18.74■□□□□ 0.59
SMG9-210ENST00000600097 MCL1Q07820 350 aa18.74■□□□□ 0.59
SMG9-210ENST00000600097 RNF19BQ6ZMZ0 732 aa18.74■□□□□ 0.59
SMG9-210ENST00000600097 KCNK18Q7Z418 384 aa18.74■□□□□ 0.59
SMG9-210ENST00000600097 HS6ST3Q8IZP7 471 aa18.74■□□□□ 0.59
SMG9-210ENST00000600097 TMEM161BQ8NDZ6 487 aa18.74■□□□□ 0.59
SMG9-210ENST00000600097 BEST2Q8NFU1 509 aa18.74■□□□□ 0.59
SMG9-210ENST00000600097 ZSCAN18Q8TBC5 510 aaPredicted RBP18.74■□□□□ 0.59
SMG9-210ENST00000600097 ZSWIM3Q96MP5 696 aa18.74■□□□□ 0.59
SMG9-210ENST00000600097 PIAS3Q9Y6X2 628 aa18.74■□□□□ 0.59
SMG9-210ENST00000600097 M0QZQ0 153 aa18.73■□□□□ 0.59
SMG9-210ENST00000600097 MOSPD3O75425 235 aa18.73■□□□□ 0.59
SMG9-210ENST00000600097 CLTAP09496 248 aa18.73■□□□□ 0.59
SMG9-210ENST00000600097 MAPTP10636 758 aaKnown RBP18.73■□□□□ 0.59
SMG9-210ENST00000600097 CCR3P51677 355 aa18.73■□□□□ 0.59
SMG9-210ENST00000600097 MLLT6P55198 1093 aaPredicted RBP18.73■□□□□ 0.59
SMG9-210ENST00000600097 PLD1Q13393 1074 aa18.73■□□□□ 0.59
SMG9-210ENST00000600097 IL17AQ16552 155 aa18.73■□□□□ 0.59
SMG9-210ENST00000600097 C1orf228Q6PIY5 440 aa18.73■□□□□ 0.59
SMG9-210ENST00000600097 MFSD6LQ8IWD5 586 aa18.73■□□□□ 0.59
SMG9-210ENST00000600097 MSANTD3Q96H12 275 aa18.73■□□□□ 0.59
SMG9-210ENST00000600097 MMTAG2Q9BU76 263 aaKnown RBP18.73■□□□□ 0.59
SMG9-210ENST00000600097 SLITRK6Q9H5Y7 841 aa18.73■□□□□ 0.59
SMG9-210ENST00000600097 KCND2Q9NZV8 630 aa18.73■□□□□ 0.59
SMG9-210ENST00000600097 TUBGCP4Q9UGJ1 667 aa18.73■□□□□ 0.59
SMG9-210ENST00000600097 GMEB2Q9UKD1 530 aa18.73■□□□□ 0.59
SMG9-210ENST00000600097 NCOR2Q9Y618 2525 aa18.72■□□□□ 0.59
SMG9-210ENST00000600097 H0YCG3 227 aa18.72■□□□□ 0.59
SMG9-210ENST00000600097 NRG2O14511 850 aaPredicted RBP18.72■□□□□ 0.59
SMG9-210ENST00000600097 CXCL8P10145 99 aa18.72■□□□□ 0.59
SMG9-210ENST00000600097 CYP3A5P20815 502 aa18.72■□□□□ 0.59
SMG9-210ENST00000600097 LRPAP1P30533 357 aa18.72■□□□□ 0.59
SMG9-210ENST00000600097 VIPR2P41587 438 aa18.72■□□□□ 0.59
SMG9-210ENST00000600097 MATR3P43243 847 aaKnown RBP eCLIP18.72■□□□□ 0.59
SMG9-210ENST00000600097 KYAT1Q16773 422 aa18.72■□□□□ 0.59
SMG9-210ENST00000600097 SEZ6Q53EL9 994 aa18.72■□□□□ 0.59
SMG9-210ENST00000600097 HYIQ5T013 277 aa18.72■□□□□ 0.59
SMG9-210ENST00000600097 USP37Q86T82 979 aa18.72■□□□□ 0.59
SMG9-210ENST00000600097 SYT2Q8N9I0 419 aaPredicted RBP18.72■□□□□ 0.59
SMG9-210ENST00000600097 LMAN1LQ9HAT1 526 aa18.72■□□□□ 0.59
SMG9-210ENST00000600097 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.72■□□□□ 0.59
SMG9-210ENST00000600097 LARSQ9P2J5 1176 aaKnown RBP18.72■□□□□ 0.59
SMG9-210ENST00000600097 RAB23Q9ULC3 237 aa18.72■□□□□ 0.59
SMG9-210ENST00000600097 UBQLN1Q9UMX0 589 aaKnown RBP18.72■□□□□ 0.59
SMG9-210ENST00000600097 YIPF1Q9Y548 306 aa18.72■□□□□ 0.59
SMG9-210ENST00000600097 CITO14578 2027 aa18.72■□□□□ 0.59
SMG9-210ENST00000600097 TTC26A0AVF1 554 aa18.71■□□□□ 0.59
SMG9-210ENST00000600097 OR6C75A6NL08 312 aa18.71■□□□□ 0.59
SMG9-210ENST00000600097 XPOTO43592 962 aaKnown RBP18.71■□□□□ 0.59
SMG9-210ENST00000600097 SEC24BO95487 1268 aa18.71■□□□□ 0.59
SMG9-210ENST00000600097 TDGF1P13385 188 aa18.71■□□□□ 0.59
SMG9-210ENST00000600097 GJA1P17302 382 aa18.71■□□□□ 0.59
SMG9-210ENST00000600097 AARSP49588 968 aaKnown RBP eCLIP18.71■□□□□ 0.59
SMG9-210ENST00000600097 EPHB3P54753 998 aa18.71■□□□□ 0.59
SMG9-210ENST00000600097 RAD51AP2Q09MP3 1159 aa18.71■□□□□ 0.59
SMG9-210ENST00000600097 TEAD2Q15562 447 aa18.71■□□□□ 0.59
SMG9-210ENST00000600097 ZRSR1Q15695 479 aaKnown RBP18.71■□□□□ 0.59
SMG9-210ENST00000600097 YAF2Q8IY57 180 aa18.71■□□□□ 0.59
SMG9-210ENST00000600097 CELF5Q8N6W0 485 aaKnown RBP18.71■□□□□ 0.59
SMG9-210ENST00000600097 SHKBP1Q8TBC3 707 aa18.71■□□□□ 0.59
SMG9-210ENST00000600097 KIF12Q96FN5 646 aa18.71■□□□□ 0.59
SMG9-210ENST00000600097 TSPAN18Q96SJ8 248 aa18.71■□□□□ 0.59
SMG9-210ENST00000600097 CDV3Q9UKY7 258 aaKnown RBP18.71■□□□□ 0.59
SMG9-210ENST00000600097 USP18Q9UMW8 372 aa18.71■□□□□ 0.59
SMG9-210ENST00000600097 KIF3AQ9Y496 699 aa18.71■□□□□ 0.59
SMG9-210ENST00000600097 HEPACAM2A8MVW5 462 aa18.7■□□□□ 0.58
SMG9-210ENST00000600097 ALDH1A3P47895 512 aa18.7■□□□□ 0.58
SMG9-210ENST00000600097 PPP2R3AQ06190 1150 aa18.7■□□□□ 0.58
SMG9-210ENST00000600097 GPR17Q13304 367 aa18.7■□□□□ 0.58
SMG9-210ENST00000600097 ZBTB6Q15916 424 aa18.7■□□□□ 0.58
SMG9-210ENST00000600097 RILPL1Q5EBL4 403 aa18.7■□□□□ 0.58
SMG9-210ENST00000600097 CSGALNACT1Q8TDX6 532 aa18.7■□□□□ 0.58
SMG9-210ENST00000600097 KCNN1Q92952 543 aa18.7■□□□□ 0.58
SMG9-210ENST00000600097 BICD1Q96G01 975 aa18.7■□□□□ 0.58
SMG9-210ENST00000600097 CDK5RAP3Q96JB5 506 aa18.7■□□□□ 0.58
SMG9-210ENST00000600097 TIMM13Q9Y5L4 95 aaPredicted RBP18.7■□□□□ 0.58
SMG9-210ENST00000600097 ARNTLO00327 626 aa18.69■□□□□ 0.58
SMG9-210ENST00000600097 CHADO15335 359 aa18.69■□□□□ 0.58
SMG9-210ENST00000600097 CHRNB1P11230 501 aa18.69■□□□□ 0.58
SMG9-210ENST00000600097 SCP2P22307 547 aa18.69■□□□□ 0.58
SMG9-210ENST00000600097 TGM1P22735 817 aa18.69■□□□□ 0.58
SMG9-210ENST00000600097 CCNE1P24864 410 aa18.69■□□□□ 0.58
SMG9-210ENST00000600097 CXCL12P48061 93 aa18.69■□□□□ 0.58
SMG9-210ENST00000600097 ATXN1P54253 815 aaKnown RBP18.69■□□□□ 0.58
SMG9-210ENST00000600097 SLC12A3P55017 1021 aa18.69■□□□□ 0.58
SMG9-210ENST00000600097 ATP2C1P98194 919 aaPredicted RBP18.69■□□□□ 0.58
SMG9-210ENST00000600097 SPAG1Q07617 926 aa18.69■□□□□ 0.58
SMG9-210ENST00000600097 FCHO2Q0JRZ9 810 aa18.69■□□□□ 0.58
SMG9-210ENST00000600097 DUSP4Q13115 394 aa18.69■□□□□ 0.58
SMG9-210ENST00000600097 LRRC32Q14392 662 aa18.69■□□□□ 0.58
SMG9-210ENST00000600097 LAIR1Q6GTX8 287 aa18.69■□□□□ 0.58
SMG9-210ENST00000600097 DSTYKQ6XUX3 929 aa18.69■□□□□ 0.58
SMG9-210ENST00000600097 SPEM1Q8N4L4 309 aa18.69■□□□□ 0.58
SMG9-210ENST00000600097 PGLYRP2Q96PD5 576 aa18.69■□□□□ 0.58
SMG9-210ENST00000600097 RTKNQ9BST9 563 aa18.69■□□□□ 0.58
SMG9-210ENST00000600097 LRRC3Q9BY71 257 aa18.69■□□□□ 0.58
SMG9-210ENST00000600097 C8orf33Q9H7E9 229 aaPredicted RBP18.69■□□□□ 0.58
SMG9-210ENST00000600097 ASB3Q9Y575 518 aa18.69■□□□□ 0.58
SMG9-210ENST00000600097 DNAH14Q0VDD8 3507 aa18.69■□□□□ 0.58
SMG9-210ENST00000600097 A0A1W2PRU2 124 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms