RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 PLVAPQ9BX97 442 aa16.7■□□□□ 0.26
SMCO4-206ENST00000596676 RBSNQ9H1K0 784 aa16.7■□□□□ 0.26
SMCO4-206ENST00000596676 APOBEC3GQ9HC16 384 aaKnown RBP16.7■□□□□ 0.26
SMCO4-206ENST00000596676 RWDD3Q9Y3V2 267 aa16.7■□□□□ 0.26
SMCO4-206ENST00000596676 ATG2AQ2TAZ0 1938 aa16.69■□□□□ 0.26
SMCO4-206ENST00000596676 C2CD2LO14523 706 aa16.69■□□□□ 0.26
SMCO4-206ENST00000596676 PRKCSHP14314 528 aaPredicted RBP16.69■□□□□ 0.26
SMCO4-206ENST00000596676 GTF2H1P32780 548 aa16.69■□□□□ 0.26
SMCO4-206ENST00000596676 PPM1AP35813 382 aa16.69■□□□□ 0.26
SMCO4-206ENST00000596676 PIK3CAP42336 1068 aa16.69■□□□□ 0.26
SMCO4-206ENST00000596676 TAF6P49848 677 aa16.69■□□□□ 0.26
SMCO4-206ENST00000596676 AP3M2P53677 418 aa16.69■□□□□ 0.26
SMCO4-206ENST00000596676 MYL7Q01449 175 aa16.69■□□□□ 0.26
SMCO4-206ENST00000596676 APBA1Q02410 837 aa16.69■□□□□ 0.26
SMCO4-206ENST00000596676 KRT17Q04695 432 aa16.69■□□□□ 0.26
SMCO4-206ENST00000596676 TRPC3Q13507 836 aa16.69■□□□□ 0.26
SMCO4-206ENST00000596676 ADGRE1Q14246 886 aa16.69■□□□□ 0.26
SMCO4-206ENST00000596676 MAN2A1Q16706 1144 aa16.69■□□□□ 0.26
SMCO4-206ENST00000596676 PTPN21Q16825 1174 aa16.69■□□□□ 0.26
SMCO4-206ENST00000596676 KRT39Q6A163 491 aa16.69■□□□□ 0.26
SMCO4-206ENST00000596676 DSTYKQ6XUX3 929 aa16.69■□□□□ 0.26
SMCO4-206ENST00000596676 DDX53Q86TM3 631 aaKnown RBP16.69■□□□□ 0.26
SMCO4-206ENST00000596676 RNF168Q8IYW5 571 aaPredicted RBP16.69■□□□□ 0.26
SMCO4-206ENST00000596676 CRACR2AQ9BSW2 395 aa16.69■□□□□ 0.26
SMCO4-206ENST00000596676 C11orf84Q9BUA3 381 aaPredicted RBP16.69■□□□□ 0.26
SMCO4-206ENST00000596676 LIMA1Q9UHB6 759 aaKnown RBP16.69■□□□□ 0.26
SMCO4-206ENST00000596676 KPNA7A9QM74 516 aa16.68■□□□□ 0.26
SMCO4-206ENST00000596676 CYB561D2O14569 222 aa16.68■□□□□ 0.26
SMCO4-206ENST00000596676 HCRTO43612 131 aa16.68■□□□□ 0.26
SMCO4-206ENST00000596676 CDK11BP21127 795 aaKnown RBP16.68■□□□□ 0.26
SMCO4-206ENST00000596676 EEF1GP26641 437 aaKnown RBP16.68■□□□□ 0.26
SMCO4-206ENST00000596676 AARSP49588 968 aaKnown RBP eCLIP16.68■□□□□ 0.26
SMCO4-206ENST00000596676 CDR1P51861 262 aa16.68■□□□□ 0.26
SMCO4-206ENST00000596676 COPB1P53618 953 aaKnown RBP16.68■□□□□ 0.26
SMCO4-206ENST00000596676 LRMPQ12912 555 aa16.68■□□□□ 0.26
SMCO4-206ENST00000596676 VWA3BQ502W6 1294 aa16.68■□□□□ 0.26
SMCO4-206ENST00000596676 RTP2Q5QGT7 225 aa16.68■□□□□ 0.26
SMCO4-206ENST00000596676 ZNF697Q5TEC3 545 aa16.68■□□□□ 0.26
SMCO4-206ENST00000596676 PRSS55Q6UWB4 352 aaPredicted RBP16.68■□□□□ 0.26
SMCO4-206ENST00000596676 USP37Q86T82 979 aa16.68■□□□□ 0.26
SMCO4-206ENST00000596676 LRRC52Q8N7C0 313 aa16.68■□□□□ 0.26
SMCO4-206ENST00000596676 TATDN2Q93075 761 aa16.68■□□□□ 0.26
SMCO4-206ENST00000596676 SUSD3Q96L08 255 aa16.68■□□□□ 0.26
SMCO4-206ENST00000596676 NDST4Q9H3R1 872 aa16.68■□□□□ 0.26
SMCO4-206ENST00000596676 NXF1Q9UBU9 619 aaKnown RBP16.68■□□□□ 0.26
SMCO4-206ENST00000596676 TRANK1O15050 2925 aa16.68■□□□□ 0.26
SMCO4-206ENST00000596676 PES1O00541 588 aaKnown RBP16.67■□□□□ 0.26
SMCO4-206ENST00000596676 STX10O60499 249 aa16.67■□□□□ 0.26
SMCO4-206ENST00000596676 CLSTN1O94985 981 aa16.67■□□□□ 0.26
SMCO4-206ENST00000596676 SOD2P04179 222 aa16.67■□□□□ 0.26
SMCO4-206ENST00000596676 RPL17P18621 184 aaKnown RBP16.67■□□□□ 0.26
SMCO4-206ENST00000596676 SLC9A1P19634 815 aa16.67■□□□□ 0.26
SMCO4-206ENST00000596676 RAP1GAPP47736 663 aa16.67■□□□□ 0.26
SMCO4-206ENST00000596676 ZNF699Q32M78 642 aa16.67■□□□□ 0.26
SMCO4-206ENST00000596676 SV2CQ496J9 727 aa16.67■□□□□ 0.26
SMCO4-206ENST00000596676 PLPP4Q5VZY2 271 aa16.67■□□□□ 0.26
SMCO4-206ENST00000596676 WSCD1Q658N2 575 aa16.67■□□□□ 0.26
SMCO4-206ENST00000596676 RSPO2Q6UXX9 243 aaPredicted RBP16.67■□□□□ 0.26
SMCO4-206ENST00000596676 SCARA5Q6ZMJ2 495 aa16.67■□□□□ 0.26
SMCO4-206ENST00000596676 TMC7Q7Z402 723 aa16.67■□□□□ 0.26
SMCO4-206ENST00000596676 FBXL13Q8NEE6 735 aa16.67■□□□□ 0.26
SMCO4-206ENST00000596676 LMO3Q8TAP4 145 aa16.67■□□□□ 0.26
SMCO4-206ENST00000596676 HERC2P3Q9BVR0 1158 aa16.67■□□□□ 0.26
SMCO4-206ENST00000596676 ZBP1Q9H171 429 aa16.67■□□□□ 0.26
SMCO4-206ENST00000596676 SDCBP2Q9H190 292 aa16.67■□□□□ 0.26
SMCO4-206ENST00000596676 SMYD3Q9H7B4 428 aa16.67■□□□□ 0.26
SMCO4-206ENST00000596676 RAB20Q9NX57 234 aa16.67■□□□□ 0.26
SMCO4-206ENST00000596676 L1RE1Q9UN81 338 aa16.67■□□□□ 0.26
SMCO4-206ENST00000596676 SNX9Q9Y5X1 595 aa16.67■□□□□ 0.26
SMCO4-206ENST00000596676 SF3B1O75533 1304 aaKnown RBP eCLIP16.67■□□□□ 0.26
SMCO4-206ENST00000596676 SZT2Q5T011 3432 aa16.66■□□□□ 0.26
SMCO4-206ENST00000596676 HIDE1A8MVS5 230 aa16.66■□□□□ 0.26
SMCO4-206ENST00000596676 M0QZQ0 153 aa16.66■□□□□ 0.26
SMCO4-206ENST00000596676 FSCN2O14926 492 aa16.66■□□□□ 0.26
SMCO4-206ENST00000596676 TEX33O43247 280 aa16.66■□□□□ 0.26
SMCO4-206ENST00000596676 CXCL14O95715 111 aa16.66■□□□□ 0.26
SMCO4-206ENST00000596676 ASS1P00966 412 aaKnown RBP16.66■□□□□ 0.26
SMCO4-206ENST00000596676 FGFR3P22607 806 aa16.66■□□□□ 0.26
SMCO4-206ENST00000596676 CA8P35219 290 aa16.66■□□□□ 0.26
SMCO4-206ENST00000596676 KLK7P49862 253 aa16.66■□□□□ 0.26
SMCO4-206ENST00000596676 CDH8P55286 799 aa16.66■□□□□ 0.26
SMCO4-206ENST00000596676 SOWAHAQ2M3V2 549 aa16.66■□□□□ 0.26
SMCO4-206ENST00000596676 WDR72Q3MJ13 1102 aa16.66■□□□□ 0.26
SMCO4-206ENST00000596676 KIAA0319Q5VV43 1072 aa16.66■□□□□ 0.26
SMCO4-206ENST00000596676 GJB7Q6PEY0 223 aa16.66■□□□□ 0.26
SMCO4-206ENST00000596676 ADGRD2Q7Z7M1 963 aa16.66■□□□□ 0.26
SMCO4-206ENST00000596676 OSTM1Q86WC4 334 aa16.66■□□□□ 0.26
SMCO4-206ENST00000596676 RIN2Q8WYP3 895 aaPredicted RBP16.66■□□□□ 0.26
SMCO4-206ENST00000596676 ZNF560Q96MR9 790 aa16.66■□□□□ 0.26
SMCO4-206ENST00000596676 NAP1L5Q96NT1 182 aaPredicted RBP16.66■□□□□ 0.26
SMCO4-206ENST00000596676 TCF25Q9BQ70 676 aa16.66■□□□□ 0.26
SMCO4-206ENST00000596676 INTS2Q9H0H0 1204 aaKnown RBP16.66■□□□□ 0.26
SMCO4-206ENST00000596676 TLR9Q9NR96 1032 aa16.66■□□□□ 0.26
SMCO4-206ENST00000596676 CHST7Q9NS84 486 aa16.66■□□□□ 0.26
SMCO4-206ENST00000596676 PUF60Q9UHX1 559 aaKnown RBP16.66■□□□□ 0.26
SMCO4-206ENST00000596676 PCDHB8Q9UN66 801 aa16.66■□□□□ 0.26
SMCO4-206ENST00000596676 COQ4Q9Y3A0 265 aa16.66■□□□□ 0.26
SMCO4-206ENST00000596676 R3HCC1Q9Y3T6 440 aaKnown RBP16.66■□□□□ 0.26
SMCO4-206ENST00000596676 NME7Q9Y5B8 376 aa16.66■□□□□ 0.26
SMCO4-206ENST00000596676 TMEM265A0A087WTH1 108 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms