RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 DNAJC7Q99615 494 aa14.04□□□□□ -0.16
SHKBP1-209ENST00000595803 KCNF1Q9H3M0 494 aa14.04□□□□□ -0.16
SHKBP1-209ENST00000595803 CNTN3Q9P232 1028 aa14.04□□□□□ -0.16
SHKBP1-209ENST00000595803 UBQLN1Q9UMX0 589 aaKnown RBP14.04□□□□□ -0.16
SHKBP1-209ENST00000595803 MTCH2Q9Y6C9 303 aa14.04□□□□□ -0.16
SHKBP1-209ENST00000595803 EOMESO95936 686 aa14.03□□□□□ -0.16
SHKBP1-209ENST00000595803 CCDC172P0C7W6 258 aa14.03□□□□□ -0.16
SHKBP1-209ENST00000595803 ATICP31939 592 aa14.03□□□□□ -0.16
SHKBP1-209ENST00000595803 RABGGTBP53611 331 aa14.03□□□□□ -0.16
SHKBP1-209ENST00000595803 MYL6P60660 151 aa14.03□□□□□ -0.16
SHKBP1-209ENST00000595803 CCZ1BP86790 482 aa14.03□□□□□ -0.16
SHKBP1-209ENST00000595803 CCZ1P86791 482 aaPredicted RBP14.03□□□□□ -0.16
SHKBP1-209ENST00000595803 GPNMBQ14956 572 aa14.03□□□□□ -0.16
SHKBP1-209ENST00000595803 ZBTB6Q15916 424 aa14.03□□□□□ -0.16
SHKBP1-209ENST00000595803 ENOSF1Q7L5Y1 443 aa14.03□□□□□ -0.16
SHKBP1-209ENST00000595803 TMEM199Q8N511 208 aa14.03□□□□□ -0.16
SHKBP1-209ENST00000595803 C1orf127Q8N9H9 656 aa14.03□□□□□ -0.16
SHKBP1-209ENST00000595803 HELQQ8TDG4 1101 aa14.03□□□□□ -0.16
SHKBP1-209ENST00000595803 TAF4BQ92750 862 aa14.03□□□□□ -0.16
SHKBP1-209ENST00000595803 LPPQ93052 612 aa14.03□□□□□ -0.16
SHKBP1-209ENST00000595803 ZMAT2Q96NC0 199 aaKnown RBP14.03□□□□□ -0.16
SHKBP1-209ENST00000595803 RPS6KC1Q96S38 1066 aa14.03□□□□□ -0.16
SHKBP1-209ENST00000595803 AIPL1Q9NZN9 384 aa14.03□□□□□ -0.16
SHKBP1-209ENST00000595803 ITGA11Q9UKX5 1188 aa14.03□□□□□ -0.16
SHKBP1-209ENST00000595803 PLAGL2Q9UPG8 496 aa14.03□□□□□ -0.16
SHKBP1-209ENST00000595803 AGAP1Q9UPQ3 857 aa14.03□□□□□ -0.16
SHKBP1-209ENST00000595803 UMODL1Q5DID0 1318 aa14.03□□□□□ -0.16
SHKBP1-209ENST00000595803 C9IYK1 514 aa14.02□□□□□ -0.17
SHKBP1-209ENST00000595803 RBAK-RBAKDNI3L0D1 243 aa14.02□□□□□ -0.17
SHKBP1-209ENST00000595803 ENPP3O14638 875 aa14.02□□□□□ -0.17
SHKBP1-209ENST00000595803 ITGB3P05106 788 aa14.02□□□□□ -0.17
SHKBP1-209ENST00000595803 FERP16591 822 aa14.02□□□□□ -0.17
SHKBP1-209ENST00000595803 TBXAS1P24557 533 aaPredicted RBP14.02□□□□□ -0.17
SHKBP1-209ENST00000595803 HNRNPH3P31942 346 aaKnown RBP14.02□□□□□ -0.17
SHKBP1-209ENST00000595803 RFC2P35250 354 aa14.02□□□□□ -0.17
SHKBP1-209ENST00000595803 SOX5P35711 763 aa14.02□□□□□ -0.17
SHKBP1-209ENST00000595803 USP8P40818 1118 aa14.02□□□□□ -0.17
SHKBP1-209ENST00000595803 FAM189BP81408 668 aa14.02□□□□□ -0.17
SHKBP1-209ENST00000595803 CDK17Q00537 523 aa14.02□□□□□ -0.17
SHKBP1-209ENST00000595803 GLRA4Q5JXX5 417 aa14.02□□□□□ -0.17
SHKBP1-209ENST00000595803 SPOPLQ6IQ16 392 aa14.02□□□□□ -0.17
SHKBP1-209ENST00000595803 AGMOQ6ZNB7 445 aa14.02□□□□□ -0.17
SHKBP1-209ENST00000595803 DEFB128Q7Z7B8 93 aa14.02□□□□□ -0.17
SHKBP1-209ENST00000595803 HLA-CQ95604 372 aa14.02□□□□□ -0.17
SHKBP1-209ENST00000595803 GAD1Q99259 594 aa14.02□□□□□ -0.17
SHKBP1-209ENST00000595803 CXCL16Q9H2A7 254 aa14.02□□□□□ -0.17
SHKBP1-209ENST00000595803 MTIF3Q9H2K0 278 aaKnown RBP14.02□□□□□ -0.17
SHKBP1-209ENST00000595803 RSAD1Q9HA92 442 aa14.02□□□□□ -0.17
SHKBP1-209ENST00000595803 RNF19AQ9NV58 838 aa14.02□□□□□ -0.17
SHKBP1-209ENST00000595803 SLC38A7Q9NVC3 462 aa14.02□□□□□ -0.17
SHKBP1-209ENST00000595803 AJAP1Q9UKB5 411 aaPredicted RBP14.02□□□□□ -0.17
SHKBP1-209ENST00000595803 ZKSCAN5Q9Y2L8 839 aa14.02□□□□□ -0.17
SHKBP1-209ENST00000595803 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.02□□□□□ -0.17
SHKBP1-209ENST00000595803 FOXN3O00409 490 aaPredicted RBP14.01□□□□□ -0.17
SHKBP1-209ENST00000595803 ARHGAP6O43182 974 aa14.01□□□□□ -0.17
SHKBP1-209ENST00000595803 ASS1P00966 412 aaKnown RBP14.01□□□□□ -0.17
SHKBP1-209ENST00000595803 CXCL10P02778 98 aa14.01□□□□□ -0.17
SHKBP1-209ENST00000595803 SERPING1P05155 500 aa14.01□□□□□ -0.17
SHKBP1-209ENST00000595803 THP07101 528 aa14.01□□□□□ -0.17
SHKBP1-209ENST00000595803 MYOGP15173 224 aa14.01□□□□□ -0.17
SHKBP1-209ENST00000595803 CYP3A5P20815 502 aa14.01□□□□□ -0.17
SHKBP1-209ENST00000595803 FECHP22830 423 aa14.01□□□□□ -0.17
SHKBP1-209ENST00000595803 POLR2BP30876 1174 aaKnown RBP14.01□□□□□ -0.17
SHKBP1-209ENST00000595803 GUCY2FP51841 1108 aa14.01□□□□□ -0.17
SHKBP1-209ENST00000595803 JAM2P57087 298 aa14.01□□□□□ -0.17
SHKBP1-209ENST00000595803 NOP14P78316 857 aaKnown RBP14.01□□□□□ -0.17
SHKBP1-209ENST00000595803 GCNT1Q02742 428 aa14.01□□□□□ -0.17
SHKBP1-209ENST00000595803 ARID5AQ03989 594 aa14.01□□□□□ -0.17
SHKBP1-209ENST00000595803 KLHL30Q0D2K2 578 aa14.01□□□□□ -0.17
SHKBP1-209ENST00000595803 ZNF699Q32M78 642 aa14.01□□□□□ -0.17
SHKBP1-209ENST00000595803 ZNF667Q5HYK9 610 aa14.01□□□□□ -0.17
SHKBP1-209ENST00000595803 C18orf25Q96B23 403 aaPredicted RBP14.01□□□□□ -0.17
SHKBP1-209ENST00000595803 ELMO3Q96BJ8 720 aa14.01□□□□□ -0.17
SHKBP1-209ENST00000595803 HPDLQ96IR7 371 aa14.01□□□□□ -0.17
SHKBP1-209ENST00000595803 CHP1Q99653 195 aa14.01□□□□□ -0.17
SHKBP1-209ENST00000595803 WNT8AQ9H1J5 351 aa14.01□□□□□ -0.17
SHKBP1-209ENST00000595803 KCNH6Q9H252 994 aa14.01□□□□□ -0.17
SHKBP1-209ENST00000595803 APOBEC3GQ9HC16 384 aaKnown RBP14.01□□□□□ -0.17
SHKBP1-209ENST00000595803 RNF216Q9NWF9 866 aaPredicted RBP14.01□□□□□ -0.17
SHKBP1-209ENST00000595803 SIX4Q9UIU6 781 aa14.01□□□□□ -0.17
SHKBP1-209ENST00000595803 LRFN2Q9ULH4 789 aa14.01□□□□□ -0.17
SHKBP1-209ENST00000595803 NUB1Q9Y5A7 615 aa14.01□□□□□ -0.17
SHKBP1-209ENST00000595803 PCDHB7Q9Y5E2 793 aa14.01□□□□□ -0.17
SHKBP1-209ENST00000595803 BZW2Q9Y6E2 419 aaKnown RBP14.01□□□□□ -0.17
SHKBP1-209ENST00000595803 CITO14578 2027 aa14.01□□□□□ -0.17
SHKBP1-209ENST00000595803 ANK1P16157 1881 aa14□□□□□ -0.17
SHKBP1-209ENST00000595803 ARL5CA6NH57 179 aa14□□□□□ -0.17
SHKBP1-209ENST00000595803 MEIS3P2A8K0S8 358 aa14□□□□□ -0.17
SHKBP1-209ENST00000595803 F8VZ95 297 aa14□□□□□ -0.17
SHKBP1-209ENST00000595803 RFXAPO00287 272 aa14□□□□□ -0.17
SHKBP1-209ENST00000595803 OFD1O75665 1012 aa14□□□□□ -0.17
SHKBP1-209ENST00000595803 GFPT2O94808 682 aa14□□□□□ -0.17
SHKBP1-209ENST00000595803 P4HA1P13674 534 aa14□□□□□ -0.17
SHKBP1-209ENST00000595803 ATF7P17544 494 aaPredicted RBP14□□□□□ -0.17
SHKBP1-209ENST00000595803 POU3F3P20264 500 aaPredicted RBP14□□□□□ -0.17
SHKBP1-209ENST00000595803 MSNP26038 577 aaKnown RBP14□□□□□ -0.17
SHKBP1-209ENST00000595803 CYLC1P35663 651 aaPredicted RBP14□□□□□ -0.17
SHKBP1-209ENST00000595803 MLH1P40692 756 aa14□□□□□ -0.17
SHKBP1-209ENST00000595803 MYO1EQ12965 1108 aa14□□□□□ -0.17
SHKBP1-209ENST00000595803 CUL2Q13617 745 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms