RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 RTP1P59025 263 aa14.03□□□□□ -0.16
VRK3-209ENST00000594948 KRT76Q01546 638 aa14.03□□□□□ -0.16
VRK3-209ENST00000594948 SPP2Q13103 211 aa14.03□□□□□ -0.16
VRK3-209ENST00000594948 BLMHQ13867 455 aa14.03□□□□□ -0.16
VRK3-209ENST00000594948 MORF4L2Q15014 288 aa14.03□□□□□ -0.16
VRK3-209ENST00000594948 P3H1Q32P28 736 aa14.03□□□□□ -0.16
VRK3-209ENST00000594948 EAPPQ56P03 285 aaPredicted RBP14.03□□□□□ -0.16
VRK3-209ENST00000594948 XKR9Q5GH70 373 aa14.03□□□□□ -0.16
VRK3-209ENST00000594948 FAM102BQ5T8I3 360 aa14.03□□□□□ -0.16
VRK3-209ENST00000594948 SLC39A4Q6P5W5 647 aa14.03□□□□□ -0.16
VRK3-209ENST00000594948 RCOR2Q8IZ40 523 aa14.03□□□□□ -0.16
VRK3-209ENST00000594948 ENDOVQ8N8Q3 282 aaKnown RBP14.03□□□□□ -0.16
VRK3-209ENST00000594948 FAM151AQ8WW52 585 aa14.03□□□□□ -0.16
VRK3-209ENST00000594948 LRRC37BQ96QE4 947 aa14.03□□□□□ -0.16
VRK3-209ENST00000594948 SMC6Q96SB8 1091 aa14.03□□□□□ -0.16
VRK3-209ENST00000594948 TRABDQ9H4I3 376 aa14.03□□□□□ -0.16
VRK3-209ENST00000594948 RNPEPL1Q9HAU8 725 aa14.03□□□□□ -0.16
VRK3-209ENST00000594948 SAYSD1Q9NPB0 183 aa14.03□□□□□ -0.16
VRK3-209ENST00000594948 GPRC5CQ9NQ84 441 aa14.03□□□□□ -0.16
VRK3-209ENST00000594948 TOPORSQ9NS56 1045 aaPredicted RBP14.03□□□□□ -0.16
VRK3-209ENST00000594948 COL20A1Q9P218 1284 aa14.03□□□□□ -0.16
VRK3-209ENST00000594948 CORO1CQ9ULV4 474 aaPredicted RBP14.03□□□□□ -0.16
VRK3-209ENST00000594948 CHKBQ9Y259 395 aa14.03□□□□□ -0.16
VRK3-209ENST00000594948 FOXO6A8MYZ6 492 aa14.02□□□□□ -0.16
VRK3-209ENST00000594948 WDR64B1ANS9 1081 aa14.02□□□□□ -0.16
VRK3-209ENST00000594948 H0YCG3 227 aa14.02□□□□□ -0.16
VRK3-209ENST00000594948 ABLIM1O14639 778 aa14.02□□□□□ -0.16
VRK3-209ENST00000594948 LIASO43766 372 aa14.02□□□□□ -0.16
VRK3-209ENST00000594948 TBC1D12O60347 775 aa14.02□□□□□ -0.16
VRK3-209ENST00000594948 SMNDC1O75940 238 aaKnown RBP eCLIP14.02□□□□□ -0.16
VRK3-209ENST00000594948 CALB2P22676 271 aa14.02□□□□□ -0.16
VRK3-209ENST00000594948 VPS41P49754 854 aa14.02□□□□□ -0.16
VRK3-209ENST00000594948 TAS2R40P59535 323 aa14.02□□□□□ -0.16
VRK3-209ENST00000594948 NOMO3P69849 1222 aa14.02□□□□□ -0.16
VRK3-209ENST00000594948 C1QBPQ07021 282 aaKnown RBP14.02□□□□□ -0.16
VRK3-209ENST00000594948 MTMR1Q13613 665 aa14.02□□□□□ -0.16
VRK3-209ENST00000594948 UGCGQ16739 394 aa14.02□□□□□ -0.16
VRK3-209ENST00000594948 BRDTQ58F21 947 aaPredicted RBP14.02□□□□□ -0.16
VRK3-209ENST00000594948 LRRC38Q5VT99 294 aa14.02□□□□□ -0.16
VRK3-209ENST00000594948 SMYD5Q6GMV2 418 aa14.02□□□□□ -0.16
VRK3-209ENST00000594948 MIS18BP1Q6P0N0 1132 aa14.02□□□□□ -0.16
VRK3-209ENST00000594948 IL31RAQ8NI17 732 aa14.02□□□□□ -0.16
VRK3-209ENST00000594948 C10orf82Q8WW14 230 aa14.02□□□□□ -0.16
VRK3-209ENST00000594948 CLEC4DQ8WXI8 215 aa14.02□□□□□ -0.16
VRK3-209ENST00000594948 POMGNT1Q8WZA1 660 aa14.02□□□□□ -0.16
VRK3-209ENST00000594948 KCNN1Q92952 543 aa14.02□□□□□ -0.16
VRK3-209ENST00000594948 PRMT6Q96LA8 375 aaPredicted RBP14.02□□□□□ -0.16
VRK3-209ENST00000594948 PWWP2AQ96N64 755 aa14.02□□□□□ -0.16
VRK3-209ENST00000594948 TLE6Q9H808 572 aa14.02□□□□□ -0.16
VRK3-209ENST00000594948 SAR1AQ9NR31 198 aa14.02□□□□□ -0.16
VRK3-209ENST00000594948 CYP39A1Q9NYL5 469 aa14.02□□□□□ -0.16
VRK3-209ENST00000594948 CCPG1Q9ULG6 757 aa14.02□□□□□ -0.16
VRK3-209ENST00000594948 TRIM33Q9UPN9 1127 aa14.02□□□□□ -0.16
VRK3-209ENST00000594948 LRRC42Q9Y546 428 aa14.02□□□□□ -0.16
VRK3-209ENST00000594948 ALOX15BO15296 676 aa14.01□□□□□ -0.17
VRK3-209ENST00000594948 TOM1O60784 492 aa14.01□□□□□ -0.17
VRK3-209ENST00000594948 PAX7P23759 505 aa14.01□□□□□ -0.17
VRK3-209ENST00000594948 CAP2P40123 477 aa14.01□□□□□ -0.17
VRK3-209ENST00000594948 MRPS9P82933 396 aaKnown RBP14.01□□□□□ -0.17
VRK3-209ENST00000594948 PSMD6Q15008 389 aa14.01□□□□□ -0.17
VRK3-209ENST00000594948 LLGL1Q15334 1064 aa14.01□□□□□ -0.17
VRK3-209ENST00000594948 WDR44Q5JSH3 913 aa14.01□□□□□ -0.17
VRK3-209ENST00000594948 FAM47EQ6ZV65 393 aa14.01□□□□□ -0.17
VRK3-209ENST00000594948 GSTA5Q7RTV2 222 aa14.01□□□□□ -0.17
VRK3-209ENST00000594948 APLFQ8IW19 511 aaPredicted RBP14.01□□□□□ -0.17
VRK3-209ENST00000594948 ALLCQ8N6M5 410 aa14.01□□□□□ -0.17
VRK3-209ENST00000594948 LRRC8CQ8TDW0 803 aa14.01□□□□□ -0.17
VRK3-209ENST00000594948 CPA5Q8WXQ8 436 aa14.01□□□□□ -0.17
VRK3-209ENST00000594948 ERP27Q96DN0 273 aa14.01□□□□□ -0.17
VRK3-209ENST00000594948 GJD4Q96KN9 370 aaPredicted RBP14.01□□□□□ -0.17
VRK3-209ENST00000594948 SENP7Q9BQF6 1050 aa14.01□□□□□ -0.17
VRK3-209ENST00000594948 HEMGNQ9BXL5 484 aa14.01□□□□□ -0.17
VRK3-209ENST00000594948 CYLDQ9NQC7 956 aa14.01□□□□□ -0.17
VRK3-209ENST00000594948 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.01□□□□□ -0.174e-6■■■■■ 48.8
VRK3-209ENST00000594948 PKD2L1Q9P0L9 805 aa14.01□□□□□ -0.17
VRK3-209ENST00000594948 IP6K2Q9UHH9 426 aa14.01□□□□□ -0.17
VRK3-209ENST00000594948 LNPEPQ9UIQ6 1025 aa14.01□□□□□ -0.17
VRK3-209ENST00000594948 KCNG1Q9UIX4 513 aa14.01□□□□□ -0.17
VRK3-209ENST00000594948 SHOC2Q9UQ13 582 aa14.01□□□□□ -0.17
VRK3-209ENST00000594948 CNTN6Q9UQ52 1028 aa14.01□□□□□ -0.17
VRK3-209ENST00000594948 ATP2A1O14983 1001 aa14.01□□□□□ -0.17
VRK3-209ENST00000594948 TYROBPO43914 113 aa14.01□□□□□ -0.17
VRK3-209ENST00000594948 DKC1O60832 514 aaKnown RBP eCLIP14.01□□□□□ -0.176e-11■■■■■ 26.8
VRK3-209ENST00000594948 PEX11AO75192 247 aa14.01□□□□□ -0.17
VRK3-209ENST00000594948 TJP3O95049 919 aa14.01□□□□□ -0.17
VRK3-209ENST00000594948 ZWINTO95229 277 aa14.01□□□□□ -0.17
VRK3-209ENST00000594948 LMNAP02545 664 aaKnown RBP14.01□□□□□ -0.17
VRK3-209ENST00000594948 RXRBP28702 533 aa14.01□□□□□ -0.17
VRK3-209ENST00000594948 RNASELQ05823 741 aaKnown RBP14.01□□□□□ -0.17
VRK3-209ENST00000594948 NFX1Q12986 1120 aaKnown RBP14.01□□□□□ -0.17
VRK3-209ENST00000594948 MAMLD1Q13495 774 aa14.01□□□□□ -0.17
VRK3-209ENST00000594948 ZACNQ401N2 412 aa14.01□□□□□ -0.17
VRK3-209ENST00000594948 SLC45A4Q5BKX6 768 aa14.01□□□□□ -0.17
VRK3-209ENST00000594948 SEPT14Q6ZU15 432 aa14.01□□□□□ -0.17
VRK3-209ENST00000594948 ABRAQ8N0Z2 381 aa14.01□□□□□ -0.17
VRK3-209ENST00000594948 FEZF2Q8TBJ5 459 aa14.01□□□□□ -0.17
VRK3-209ENST00000594948 FBXO41Q8TF61 875 aa14.01□□□□□ -0.17
VRK3-209ENST00000594948 STK32AQ8WU08 396 aa14.01□□□□□ -0.17
VRK3-209ENST00000594948 TCEAL9Q9UHQ7 104 aa14.01□□□□□ -0.17
VRK3-209ENST00000594948 KIAA1217Q5T5P2 1943 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms