RNA–Protein interactions for RNA: ENST00000593639.5

SRRM1-221, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-221ENST00000593639 VNN2O95498 520 aa10.1□□□□□ -0.79
SRRM1-221ENST00000593639 SPATA31C1P0DKV0 1188 aa10.1□□□□□ -0.79
SRRM1-221ENST00000593639 XRCC6P12956 609 aaKnown RBP eCLIP10.1□□□□□ -0.79
SRRM1-221ENST00000593639 ATP2B1P20020 1258 aa10.1□□□□□ -0.79
SRRM1-221ENST00000593639 NOVA1P51513 510 aaKnown RBP10.1□□□□□ -0.79
SRRM1-221ENST00000593639 TNK2Q07912 1038 aa10.1□□□□□ -0.79
SRRM1-221ENST00000593639 STK3Q13188 491 aa10.1□□□□□ -0.79
SRRM1-221ENST00000593639 CTXN3Q4LDR2 81 aa10.1□□□□□ -0.79
SRRM1-221ENST00000593639 XKR4Q5GH76 650 aa10.1□□□□□ -0.79
SRRM1-221ENST00000593639 ATF7IP2Q5U623 682 aa10.1□□□□□ -0.79
SRRM1-221ENST00000593639 ALKAL1Q6UXT8 129 aa10.1□□□□□ -0.79
SRRM1-221ENST00000593639 RNF19BQ6ZMZ0 732 aa10.1□□□□□ -0.79
SRRM1-221ENST00000593639 ARID3BQ8IVW6 561 aaPredicted RBP10.1□□□□□ -0.79
SRRM1-221ENST00000593639 SYNPOQ8N3V7 929 aa10.1□□□□□ -0.79
SRRM1-221ENST00000593639 DEPTORQ8TB45 409 aa10.1□□□□□ -0.79
SRRM1-221ENST00000593639 FAM200AQ8TCP9 573 aa10.1□□□□□ -0.79
SRRM1-221ENST00000593639 E2F7Q96AV8 911 aa10.1□□□□□ -0.79
SRRM1-221ENST00000593639 MKNK1Q9BUB5 465 aa10.1□□□□□ -0.79
SRRM1-221ENST00000593639 GPR88Q9GZN0 384 aa10.1□□□□□ -0.79
SRRM1-221ENST00000593639 DNAJC25Q9H1X3 360 aa10.1□□□□□ -0.79
SRRM1-221ENST00000593639 CRISPLD1Q9H336 500 aa10.1□□□□□ -0.79
SRRM1-221ENST00000593639 TTC12Q9H892 705 aaPredicted RBP10.1□□□□□ -0.79
SRRM1-221ENST00000593639 VPS45Q9NRW7 570 aa10.1□□□□□ -0.79
SRRM1-221ENST00000593639 POLR3BQ9NW08 1133 aaPredicted RBP10.1□□□□□ -0.79
SRRM1-221ENST00000593639 YIPF1Q9Y548 306 aa10.1□□□□□ -0.79
SRRM1-221ENST00000593639 PCDHGA5Q9Y5G8 931 aa10.1□□□□□ -0.79
SRRM1-221ENST00000593639 CCDC163A0A0D9SF12 145 aa10.09□□□□□ -0.79
SRRM1-221ENST00000593639 CCDC192P0DO97 292 aa10.09□□□□□ -0.79
SRRM1-221ENST00000593639 PSMA5P28066 241 aa10.09□□□□□ -0.79
SRRM1-221ENST00000593639 TXKP42681 527 aa10.09□□□□□ -0.79
SRRM1-221ENST00000593639 NAMPTP43490 491 aa10.09□□□□□ -0.79
SRRM1-221ENST00000593639 OSTNP61366 133 aa10.09□□□□□ -0.79
SRRM1-221ENST00000593639 ZNF252P-AS1Q0IIN9 211 aa10.09□□□□□ -0.79
SRRM1-221ENST00000593639 NR5A1Q13285 461 aa10.09□□□□□ -0.79
SRRM1-221ENST00000593639 CALCRLQ16602 461 aa10.09□□□□□ -0.79
SRRM1-221ENST00000593639 PLK5Q496M5 336 aa10.09□□□□□ -0.79
SRRM1-221ENST00000593639 ZNF280DQ6N043 979 aa10.09□□□□□ -0.79
SRRM1-221ENST00000593639 CATSPER3Q86XQ3 398 aa10.09□□□□□ -0.79
SRRM1-221ENST00000593639 GATA6Q92908 595 aa10.09□□□□□ -0.79
SRRM1-221ENST00000593639 TNFRSF25Q93038 417 aa10.09□□□□□ -0.79
SRRM1-221ENST00000593639 C18orf25Q96B23 403 aaPredicted RBP10.09□□□□□ -0.79
SRRM1-221ENST00000593639 ZNF274Q96GC6 653 aaPredicted RBP10.09□□□□□ -0.79
SRRM1-221ENST00000593639 ZC3H10Q96K80 434 aaKnown RBP10.09□□□□□ -0.79
SRRM1-221ENST00000593639 EDEM2Q9BV94 578 aa10.09□□□□□ -0.79
SRRM1-221ENST00000593639 ADAM33Q9BZ11 813 aa10.09□□□□□ -0.79
SRRM1-221ENST00000593639 POLD4Q9HCU8 107 aa10.09□□□□□ -0.79
SRRM1-221ENST00000593639 NUB1Q9Y5A7 615 aa10.09□□□□□ -0.79
SRRM1-221ENST00000593639 NBEAQ8NFP9 2946 aa10.09□□□□□ -0.79
SRRM1-221ENST00000593639 SRRM3A6NNA2 597 aaPredicted RBP10.08□□□□□ -0.8
SRRM1-221ENST00000593639 C4orf47A7E2U8 309 aa10.08□□□□□ -0.8
SRRM1-221ENST00000593639 MEFVO15553 781 aaPredicted RBP10.08□□□□□ -0.8
SRRM1-221ENST00000593639 MED24O75448 989 aa10.08□□□□□ -0.8
SRRM1-221ENST00000593639 AKAP3O75969 853 aa10.08□□□□□ -0.8
SRRM1-221ENST00000593639 OR4Q2P0C623 313 aa10.08□□□□□ -0.8
SRRM1-221ENST00000593639 CPB1P15086 417 aa10.08□□□□□ -0.8
SRRM1-221ENST00000593639 CYP11B2P19099 503 aa10.08□□□□□ -0.8
SRRM1-221ENST00000593639 GRM5P41594 1212 aa10.08□□□□□ -0.8
SRRM1-221ENST00000593639 RING1Q06587 406 aa10.08□□□□□ -0.8
SRRM1-221ENST00000593639 ARHGAP29Q52LW3 1261 aa10.08□□□□□ -0.8
SRRM1-221ENST00000593639 SH3PXD2AQ5TCZ1 1133 aa10.08□□□□□ -0.8
SRRM1-221ENST00000593639 CPLX2Q6PUV4 134 aaKnown RBP10.08□□□□□ -0.8
SRRM1-221ENST00000593639 PADI6Q6TGC4 694 aa10.08□□□□□ -0.8
SRRM1-221ENST00000593639 GAREM2Q75VX8 874 aa10.08□□□□□ -0.8
SRRM1-221ENST00000593639 RUFY3Q7L099 469 aa10.08□□□□□ -0.8
SRRM1-221ENST00000593639 TMEM130Q8N3G9 435 aa10.08□□□□□ -0.8
SRRM1-221ENST00000593639 BEST2Q8NFU1 509 aa10.08□□□□□ -0.8
SRRM1-221ENST00000593639 DDX12PQ92771 950 aa10.08□□□□□ -0.8
SRRM1-221ENST00000593639 SUSD3Q96L08 255 aa10.08□□□□□ -0.8
SRRM1-221ENST00000593639 PGLYRP2Q96PD5 576 aa10.08□□□□□ -0.8
SRRM1-221ENST00000593639 MTMR9Q96QG7 549 aa10.08□□□□□ -0.8
SRRM1-221ENST00000593639 CDT1Q9H211 546 aa10.08□□□□□ -0.8
SRRM1-221ENST00000593639 ZSWIM6Q9HCJ5 1215 aa10.08□□□□□ -0.8
SRRM1-221ENST00000593639 SLC38A7Q9NVC3 462 aa10.08□□□□□ -0.8
SRRM1-221ENST00000593639 MAFFQ9ULX9 164 aa10.08□□□□□ -0.8
SRRM1-221ENST00000593639 CELSR3Q9NYQ7 3312 aa10.08□□□□□ -0.8
SRRM1-221ENST00000593639 ITPR1Q14643 2758 aa10.07□□□□□ -0.8
SRRM1-221ENST00000593639 DCLK1O15075 740 aa10.07□□□□□ -0.8
SRRM1-221ENST00000593639 NEMFO60524 1076 aa10.07□□□□□ -0.8
SRRM1-221ENST00000593639 PRAMEF12O95522 483 aa10.07□□□□□ -0.8
SRRM1-221ENST00000593639 KCNE1P15382 129 aa10.07□□□□□ -0.8
SRRM1-221ENST00000593639 RPL9P32969 192 aaKnown RBP10.07□□□□□ -0.8
SRRM1-221ENST00000593639 MCM4P33991 863 aa10.07□□□□□ -0.8
SRRM1-221ENST00000593639 YARSP54577 528 aaKnown RBP10.07□□□□□ -0.8
SRRM1-221ENST00000593639 SCRN1Q12765 414 aa10.07□□□□□ -0.8
SRRM1-221ENST00000593639 DUSP4Q13115 394 aa10.07□□□□□ -0.8
SRRM1-221ENST00000593639 FSTL4Q6MZW2 842 aa10.07□□□□□ -0.8
SRRM1-221ENST00000593639 LRSAM1Q6UWE0 723 aa10.07□□□□□ -0.8
SRRM1-221ENST00000593639 HAUS6Q7Z4H7 955 aa10.07□□□□□ -0.8
SRRM1-221ENST00000593639 APPL2Q8NEU8 664 aa10.07□□□□□ -0.8
SRRM1-221ENST00000593639 CHFRQ96EP1 664 aa10.07□□□□□ -0.8
SRRM1-221ENST00000593639 TBC1D32Q96NH3 1257 aa10.07□□□□□ -0.8
SRRM1-221ENST00000593639 HHIPQ96QV1 700 aa10.07□□□□□ -0.8
SRRM1-221ENST00000593639 TMEM209Q96SK2 561 aa10.07□□□□□ -0.8
SRRM1-221ENST00000593639 CCDC94Q9BW85 323 aaPredicted RBP10.07□□□□□ -0.8
SRRM1-221ENST00000593639 DUSP15Q9H1R2 295 aaPredicted RBP10.07□□□□□ -0.8
SRRM1-221ENST00000593639 TMEM60Q9H2L4 133 aa10.07□□□□□ -0.8
SRRM1-221ENST00000593639 PTPRHQ9HD43 1115 aa10.07□□□□□ -0.8
SRRM1-221ENST00000593639 TOPORSQ9NS56 1045 aaPredicted RBP10.07□□□□□ -0.8
SRRM1-221ENST00000593639 SLC8A2Q9UPR5 921 aa10.07□□□□□ -0.8
SRRM1-221ENST00000593639 TNFSF13BQ9Y275 285 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms