RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 WWC2Q6AWC2 1192 aa8.58□□□□□ -1.04
VMP1-213ENST00000591877 PSRC1Q6PGN9 363 aaPredicted RBP8.58□□□□□ -1.04
VMP1-213ENST00000591877 OTOP2Q7RTS6 562 aa8.58□□□□□ -1.04
VMP1-213ENST00000591877 MAMDC2Q7Z304 686 aaPredicted RBP8.58□□□□□ -1.04
VMP1-213ENST00000591877 SESTD1Q86VW0 696 aa8.58□□□□□ -1.04
VMP1-213ENST00000591877 JAMLQ86YT9 394 aa8.58□□□□□ -1.04
VMP1-213ENST00000591877 KSR1Q8IVT5 923 aa8.58□□□□□ -1.04
VMP1-213ENST00000591877 FANCBQ8NB91 859 aa8.58□□□□□ -1.04
VMP1-213ENST00000591877 PPTC7Q8NI37 304 aa8.58□□□□□ -1.04
VMP1-213ENST00000591877 BCL7CQ8WUZ0 217 aaPredicted RBP8.58□□□□□ -1.04
VMP1-213ENST00000591877 MYLIPQ8WY64 445 aa8.58□□□□□ -1.04
VMP1-213ENST00000591877 DDX1Q92499 740 aaKnown RBP8.58□□□□□ -1.04
VMP1-213ENST00000591877 RRP36Q96EU6 259 aaKnown RBP8.58□□□□□ -1.04
VMP1-213ENST00000591877 TCEANC2Q96MN5 208 aa8.58□□□□□ -1.04
VMP1-213ENST00000591877 NEK1Q96PY6 1258 aa8.58□□□□□ -1.04
VMP1-213ENST00000591877 TRIM39Q9HCM9 518 aa8.58□□□□□ -1.04
VMP1-213ENST00000591877 SLC5A6Q9Y289 635 aa8.58□□□□□ -1.04
VMP1-213ENST00000591877 TELO2Q9Y4R8 837 aa8.58□□□□□ -1.04
VMP1-213ENST00000591877 CDH23Q9H251 3354 aa8.58□□□□□ -1.04
VMP1-213ENST00000591877 MYO9BQ13459 2157 aa8.57□□□□□ -1.04
VMP1-213ENST00000591877 TMEM265A0A087WTH1 108 aa8.57□□□□□ -1.04
VMP1-213ENST00000591877 TBX1O43435 398 aa8.57□□□□□ -1.04
VMP1-213ENST00000591877 DLX3O60479 287 aa8.57□□□□□ -1.04
VMP1-213ENST00000591877 F2P00734 622 aa8.57□□□□□ -1.04
VMP1-213ENST00000591877 SCG5P05408 212 aa8.57□□□□□ -1.04
VMP1-213ENST00000591877 IQCF3P0C7M6 154 aa8.57□□□□□ -1.04
VMP1-213ENST00000591877 ZNF286BP0CG31 522 aa8.57□□□□□ -1.04
VMP1-213ENST00000591877 RAB6AP20340 208 aa8.57□□□□□ -1.04
VMP1-213ENST00000591877 CASTP20810 708 aaKnown RBP8.57□□□□□ -1.04
VMP1-213ENST00000591877 CCND2P30279 289 aa8.57□□□□□ -1.04
VMP1-213ENST00000591877 ICAM3P32942 547 aa8.57□□□□□ -1.04
VMP1-213ENST00000591877 GNAQP50148 359 aa8.57□□□□□ -1.04
VMP1-213ENST00000591877 GFRA1P56159 465 aa8.57□□□□□ -1.04
VMP1-213ENST00000591877 ZNF445P59923 1031 aa8.57□□□□□ -1.04
VMP1-213ENST00000591877 PTGISQ16647 500 aa8.57□□□□□ -1.04
VMP1-213ENST00000591877 DGKDQ16760 1214 aa8.57□□□□□ -1.04
VMP1-213ENST00000591877 GTF2IRD2BQ6EKJ0 949 aa8.57□□□□□ -1.04
VMP1-213ENST00000591877 KCNV1Q6PIU1 500 aa8.57□□□□□ -1.04
VMP1-213ENST00000591877 APOA5Q6Q788 366 aa8.57□□□□□ -1.04
VMP1-213ENST00000591877 TMTC3Q6ZXV5 915 aa8.57□□□□□ -1.04
VMP1-213ENST00000591877 ZNF765Q7L2R6 523 aa8.57□□□□□ -1.04
VMP1-213ENST00000591877 GTF2IRD2Q86UP8 949 aa8.57□□□□□ -1.04
VMP1-213ENST00000591877 DDX42Q86XP3 938 aaKnown RBP eCLIP8.57□□□□□ -1.04
VMP1-213ENST00000591877 SLC17A8Q8NDX2 589 aa8.57□□□□□ -1.04
VMP1-213ENST00000591877 PTPRN2Q92932 1015 aa8.57□□□□□ -1.04
VMP1-213ENST00000591877 INPP4AQ96PE3 977 aaPredicted RBP8.57□□□□□ -1.04
VMP1-213ENST00000591877 LZTS2Q9BRK4 669 aa8.57□□□□□ -1.04
VMP1-213ENST00000591877 C16orf70Q9BSU1 422 aa8.57□□□□□ -1.04
VMP1-213ENST00000591877 ALG1Q9BT22 464 aa8.57□□□□□ -1.04
VMP1-213ENST00000591877 NKX2-4Q9H2Z4 354 aa8.57□□□□□ -1.04
VMP1-213ENST00000591877 RTEL1Q9NZ71 1219 aa8.57□□□□□ -1.04
VMP1-213ENST00000591877 HDAC6Q9UBN7 1215 aa8.57□□□□□ -1.04
VMP1-213ENST00000591877 GTF2IRD1Q9UHL9 959 aa8.57□□□□□ -1.04
VMP1-213ENST00000591877 SF3B6Q9Y3B4 125 aaKnown RBP8.57□□□□□ -1.04
VMP1-213ENST00000591877 EYSQ5T1H1 3165 aa8.57□□□□□ -1.04
VMP1-213ENST00000591877 CHD7Q9P2D1 2997 aa8.56□□□□□ -1.04
VMP1-213ENST00000591877 PPFIA4O75335 1185 aa8.56□□□□□ -1.04
VMP1-213ENST00000591877 DNAJC8O75937 253 aaPredicted RBP8.56□□□□□ -1.04
VMP1-213ENST00000591877 CPP00450 1065 aa8.56□□□□□ -1.04
VMP1-213ENST00000591877 CALM1P0DP23 149 aa8.56□□□□□ -1.04
VMP1-213ENST00000591877 CALM2P0DP24 149 aa8.56□□□□□ -1.04
VMP1-213ENST00000591877 CALM3P0DP25 149 aa8.56□□□□□ -1.04
VMP1-213ENST00000591877 TGFB3P10600 412 aa8.56□□□□□ -1.04
VMP1-213ENST00000591877 CPA1P15085 419 aa8.56□□□□□ -1.04
VMP1-213ENST00000591877 ZNF200P98182 395 aaPredicted RBP8.56□□□□□ -1.04
VMP1-213ENST00000591877 ODR4Q5SWX8 454 aa8.56□□□□□ -1.04
VMP1-213ENST00000591877 SPRED2Q7Z698 418 aa8.56□□□□□ -1.04
VMP1-213ENST00000591877 DEFB128Q7Z7B8 93 aa8.56□□□□□ -1.04
VMP1-213ENST00000591877 MICU3Q86XE3 530 aa8.56□□□□□ -1.04
VMP1-213ENST00000591877 WFDC3Q8IUB2 231 aa8.56□□□□□ -1.04
VMP1-213ENST00000591877 SMARCC2Q8TAQ2 1214 aa8.56□□□□□ -1.04
VMP1-213ENST00000591877 BTN2A2Q8WVV5 523 aa8.56□□□□□ -1.04
VMP1-213ENST00000591877 TIFAQ96CG3 184 aa8.56□□□□□ -1.04
VMP1-213ENST00000591877 CCDC136Q96JN2 1154 aa8.56□□□□□ -1.04
VMP1-213ENST00000591877 SPATA33Q96N06 139 aa8.56□□□□□ -1.04
VMP1-213ENST00000591877 SEC63Q9UGP8 760 aaKnown RBP8.56□□□□□ -1.04
VMP1-213ENST00000591877 FBXL21Q9UKT6 434 aa8.56□□□□□ -1.04
VMP1-213ENST00000591877 YBX2Q9Y2T7 364 aaKnown RBP8.56□□□□□ -1.04
VMP1-213ENST00000591877 TRANK1O15050 2925 aa8.56□□□□□ -1.04
VMP1-213ENST00000591877 A0A0C4DFX4 3053 aa8.55□□□□□ -1.04
VMP1-213ENST00000591877 UNC80Q8N2C7 3258 aa8.55□□□□□ -1.04
VMP1-213ENST00000591877 SIP14410 1827 aa8.55□□□□□ -1.04
VMP1-213ENST00000591877 KAT6AQ92794 2004 aa8.55□□□□□ -1.04
VMP1-213ENST00000591877 ATP9AO75110 1047 aa8.55□□□□□ -1.04
VMP1-213ENST00000591877 KCNH1O95259 989 aa8.55□□□□□ -1.04
VMP1-213ENST00000591877 ASLP04424 464 aa8.55□□□□□ -1.04
VMP1-213ENST00000591877 MYOGP15173 224 aa8.55□□□□□ -1.04
VMP1-213ENST00000591877 HSPA4P34932 840 aa8.55□□□□□ -1.04
VMP1-213ENST00000591877 RABGGTBP53611 331 aa8.55□□□□□ -1.04
VMP1-213ENST00000591877 UBE2SQ16763 222 aa8.55□□□□□ -1.04
VMP1-213ENST00000591877 KIAA0753Q2KHM9 967 aa8.55□□□□□ -1.04
VMP1-213ENST00000591877 TCTN1Q2MV58 587 aa8.55□□□□□ -1.04
VMP1-213ENST00000591877 TRIM71Q2Q1W2 868 aaKnown RBP8.55□□□□□ -1.04
VMP1-213ENST00000591877 BRAPQ7Z569 592 aa8.55□□□□□ -1.04
VMP1-213ENST00000591877 CDH24Q86UP0 819 aa8.55□□□□□ -1.04
VMP1-213ENST00000591877 ADCY4Q8NFM4 1077 aa8.55□□□□□ -1.04
VMP1-213ENST00000591877 RIN3Q8TB24 985 aa8.55□□□□□ -1.04
VMP1-213ENST00000591877 FAM168AQ92567 244 aa8.55□□□□□ -1.04
VMP1-213ENST00000591877 PSTPIP2Q9H939 334 aa8.55□□□□□ -1.04
VMP1-213ENST00000591877 MLXIPQ9HAP2 919 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms