RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 COL9A1P20849 921 aa13.07□□□□□ -0.32
TPM4-212ENST00000590180 PAX3P23760 479 aa13.07□□□□□ -0.32
TPM4-212ENST00000590180 HOXD13P35453 343 aa13.07□□□□□ -0.32
TPM4-212ENST00000590180 NDUFA8P51970 172 aa13.07□□□□□ -0.32
TPM4-212ENST00000590180 PTPN21Q16825 1174 aa13.07□□□□□ -0.32
TPM4-212ENST00000590180 SLC8B1Q6J4K2 584 aa13.07□□□□□ -0.32
TPM4-212ENST00000590180 EPM2AIP1Q7L775 607 aaPredicted RBP13.07□□□□□ -0.32
TPM4-212ENST00000590180 GRASPQ7Z6J2 395 aaPredicted RBP13.07□□□□□ -0.32
TPM4-212ENST00000590180 NT5DC4Q86YG4 428 aa13.07□□□□□ -0.32
TPM4-212ENST00000590180 BRSK2Q8IWQ3 736 aa13.07□□□□□ -0.32
TPM4-212ENST00000590180 EFCAB13Q8IY85 973 aa13.07□□□□□ -0.32
TPM4-212ENST00000590180 RDH13Q8NBN7 331 aa13.07□□□□□ -0.32
TPM4-212ENST00000590180 SCFD1Q8WVM8 642 aa13.07□□□□□ -0.32
TPM4-212ENST00000590180 CYP4F11Q9HBI6 524 aa13.07□□□□□ -0.32
TPM4-212ENST00000590180 PDE11AQ9HCR9 933 aa13.07□□□□□ -0.32
TPM4-212ENST00000590180 C11orf16Q9NQ32 467 aa13.07□□□□□ -0.32
TPM4-212ENST00000590180 R3HCC1Q9Y3T6 440 aaKnown RBP13.07□□□□□ -0.32
TPM4-212ENST00000590180 CLUHO75153 1309 aa13.07□□□□□ -0.32
TPM4-212ENST00000590180 VWA8A3KMH1 1905 aa13.06□□□□□ -0.32
TPM4-212ENST00000590180 A0A1W2PQ27 194 aa13.06□□□□□ -0.32
TPM4-212ENST00000590180 A0A1W2PQ64 194 aa13.06□□□□□ -0.32
TPM4-212ENST00000590180 A0A1W2PQD8 194 aa13.06□□□□□ -0.32
TPM4-212ENST00000590180 ANO9A1A5B4 782 aa13.06□□□□□ -0.32
TPM4-212ENST00000590180 ARHGEF37A1IGU5 675 aa13.06□□□□□ -0.32
TPM4-212ENST00000590180 CYB561D2O14569 222 aa13.06□□□□□ -0.32
TPM4-212ENST00000590180 SPTLC1O15269 473 aa13.06□□□□□ -0.32
TPM4-212ENST00000590180 OAZ2O95190 189 aa13.06□□□□□ -0.32
TPM4-212ENST00000590180 ASGR2P07307 311 aa13.06□□□□□ -0.32
TPM4-212ENST00000590180 CPB1P15086 417 aa13.06□□□□□ -0.32
TPM4-212ENST00000590180 TYMPP19971 482 aa13.06□□□□□ -0.32
TPM4-212ENST00000590180 FSHRP23945 695 aa13.06□□□□□ -0.32
TPM4-212ENST00000590180 TAF6P49848 677 aa13.06□□□□□ -0.32
TPM4-212ENST00000590180 NTHL1P78549 312 aa13.06□□□□□ -0.32
TPM4-212ENST00000590180 KMT5BQ4FZB7 885 aa13.06□□□□□ -0.32
TPM4-212ENST00000590180 OVOS1Q6IE37 1185 aa13.06□□□□□ -0.32
TPM4-212ENST00000590180 TRIM67Q6ZTA4 783 aa13.06□□□□□ -0.32
TPM4-212ENST00000590180 HS2ST1Q7LGA3 356 aa13.06□□□□□ -0.32
TPM4-212ENST00000590180 METTL23Q86XA0 190 aa13.06□□□□□ -0.32
TPM4-212ENST00000590180 CSGALNACT2Q8N6G5 542 aa13.06□□□□□ -0.32
TPM4-212ENST00000590180 CCDC47Q96A33 483 aaKnown RBP13.06□□□□□ -0.32
TPM4-212ENST00000590180 EXOC1Q9NV70 894 aa13.06□□□□□ -0.32
TPM4-212ENST00000590180 HSPBP1Q9NZL4 362 aa13.06□□□□□ -0.32
TPM4-212ENST00000590180 AGAP1Q9UPQ3 857 aa13.06□□□□□ -0.32
TPM4-212ENST00000590180 HPSEQ9Y251 543 aa13.06□□□□□ -0.32
TPM4-212ENST00000590180 C5orf42Q9H799 3197 aa13.06□□□□□ -0.32
TPM4-212ENST00000590180 PLXNA3P51805 1871 aa13.06□□□□□ -0.32
TPM4-212ENST00000590180 MTCL1Q9Y4B5 1905 aaKnown RBP13.05□□□□□ -0.32
TPM4-212ENST00000590180 PRR33A8MZF0 331 aa13.05□□□□□ -0.32
TPM4-212ENST00000590180 TGFB1I1O43294 461 aa13.05□□□□□ -0.32
TPM4-212ENST00000590180 KLRC4O43908 158 aa13.05□□□□□ -0.32
TPM4-212ENST00000590180 SEC24AO95486 1093 aa13.05□□□□□ -0.32
TPM4-212ENST00000590180 LRG1P02750 347 aa13.05□□□□□ -0.32
TPM4-212ENST00000590180 KRT19P08727 400 aa13.05□□□□□ -0.32
TPM4-212ENST00000590180 ODC1P11926 461 aa13.05□□□□□ -0.32
TPM4-212ENST00000590180 ATF2P15336 505 aa13.05□□□□□ -0.32
TPM4-212ENST00000590180 HOXA9P31269 272 aa13.05□□□□□ -0.32
TPM4-212ENST00000590180 AARSP49588 968 aaKnown RBP eCLIP13.05□□□□□ -0.32
TPM4-212ENST00000590180 CYP2J2P51589 502 aa13.05□□□□□ -0.32
TPM4-212ENST00000590180 WNT7BP56706 349 aa13.05□□□□□ -0.32
TPM4-212ENST00000590180 EHHADHQ08426 723 aa13.05□□□□□ -0.32
TPM4-212ENST00000590180 ADCY1Q08828 1119 aa13.05□□□□□ -0.32
TPM4-212ENST00000590180 STK4Q13043 487 aa13.05□□□□□ -0.32
TPM4-212ENST00000590180 PSMD2Q13200 908 aa13.05□□□□□ -0.32
TPM4-212ENST00000590180 SURF1Q15526 300 aa13.05□□□□□ -0.32
TPM4-212ENST00000590180 TPGS2Q68CL5 300 aa13.05□□□□□ -0.32
TPM4-212ENST00000590180 RTL10Q7L3V2 364 aa13.05□□□□□ -0.32
TPM4-212ENST00000590180 GET4Q7L5D6 327 aaPredicted RBP13.05□□□□□ -0.32
TPM4-212ENST00000590180 CBWD2Q8IUF1 395 aa13.05□□□□□ -0.32
TPM4-212ENST00000590180 TCEAL8Q8IYN2 117 aa13.05□□□□□ -0.32
TPM4-212ENST00000590180 THEM5Q8N1Q8 247 aa13.05□□□□□ -0.32
TPM4-212ENST00000590180 MYADMQ96S97 322 aa13.05□□□□□ -0.32
TPM4-212ENST00000590180 OXCT2Q9BYC2 517 aaPredicted RBP13.05□□□□□ -0.32
TPM4-212ENST00000590180 KIAA1586Q9HCI6 787 aa13.05□□□□□ -0.32
TPM4-212ENST00000590180 AGPAT3Q9NRZ7 376 aa13.05□□□□□ -0.32
TPM4-212ENST00000590180 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.05□□□□□ -0.32
TPM4-212ENST00000590180 AFF4Q9UHB7 1163 aaKnown RBP13.05□□□□□ -0.32
TPM4-212ENST00000590180 SORCS3Q9UPU3 1222 aa13.05□□□□□ -0.32
TPM4-212ENST00000590180 FAM237AA0A1B0GTK4 181 aa13.04□□□□□ -0.32
TPM4-212ENST00000590180 TMEM221A6NGB7 291 aa13.04□□□□□ -0.32
TPM4-212ENST00000590180 OR6C75A6NL08 312 aa13.04□□□□□ -0.32
TPM4-212ENST00000590180 KPNA7A9QM74 516 aa13.04□□□□□ -0.32
TPM4-212ENST00000590180 M0R296 226 aa13.04□□□□□ -0.32
TPM4-212ENST00000590180 ZNF202O95125 648 aa13.04□□□□□ -0.32
TPM4-212ENST00000590180 PAPLNO95428 1278 aa13.04□□□□□ -0.32
TPM4-212ENST00000590180 RPN1P04843 607 aaKnown RBP13.04□□□□□ -0.32
TPM4-212ENST00000590180 ITGB3P05106 788 aa13.04□□□□□ -0.32
TPM4-212ENST00000590180 MYL1P05976 194 aa13.04□□□□□ -0.32
TPM4-212ENST00000590180 OR4Q2P0C623 313 aa13.04□□□□□ -0.32
TPM4-212ENST00000590180 TMEM191BP0C7N4 346 aa13.04□□□□□ -0.32
TPM4-212ENST00000590180 PTPN2P17706 415 aa13.04□□□□□ -0.32
TPM4-212ENST00000590180 POLR2BP30876 1174 aaKnown RBP13.04□□□□□ -0.32
TPM4-212ENST00000590180 SNRPFP62306 86 aaKnown RBP13.04□□□□□ -0.32
TPM4-212ENST00000590180 RBP5P82980 135 aa13.04□□□□□ -0.32
TPM4-212ENST00000590180 SIGLEC14Q08ET2 396 aa13.04□□□□□ -0.32
TPM4-212ENST00000590180 MTMR3Q13615 1198 aa13.04□□□□□ -0.32
TPM4-212ENST00000590180 KNOP1Q1ED39 458 aaKnown RBP13.04□□□□□ -0.32
TPM4-212ENST00000590180 DUOXA2Q1HG44 320 aa13.04□□□□□ -0.32
TPM4-212ENST00000590180 SV2CQ496J9 727 aa13.04□□□□□ -0.32
TPM4-212ENST00000590180 LMBRD2Q68DH5 695 aaPredicted RBP13.04□□□□□ -0.32
TPM4-212ENST00000590180 RNF19BQ6ZMZ0 732 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms