RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	INTU	Q9ULD6	942 aa		16.47	■□□□□ 0.23
DDX39A-209	ENST00000589318	LACTBL1	A8MY62	500 aa		16.47	■□□□□ 0.23
DDX39A-209	ENST00000589318	GOLGA8K	D6RF30	607 aa		16.47	■□□□□ 0.23
DDX39A-209	ENST00000589318	BUB1	O43683	1085 aa		16.47	■□□□□ 0.23
DDX39A-209	ENST00000589318	NFIC	P08651	508 aa		16.47	■□□□□ 0.23
DDX39A-209	ENST00000589318	GNAT1	P11488	350 aa		16.47	■□□□□ 0.23
DDX39A-209	ENST00000589318	TNFAIP3	P21580	790 aa		16.47	■□□□□ 0.23
DDX39A-209	ENST00000589318	EIF4B	P23588	611 aa	Known RBP	16.47	■□□□□ 0.23
DDX39A-209	ENST00000589318	HTRA3	P83110	453 aa		16.47	■□□□□ 0.23
DDX39A-209	ENST00000589318	TFAM	Q00059	246 aa	Known RBP	16.47	■□□□□ 0.23
DDX39A-209	ENST00000589318	CKAP4	Q07065	602 aa	Known RBP	16.47	■□□□□ 0.23
DDX39A-209	ENST00000589318	CUL2	Q13617	745 aa		16.47	■□□□□ 0.23
DDX39A-209	ENST00000589318	SNX17	Q15036	470 aa		16.47	■□□□□ 0.23
DDX39A-209	ENST00000589318	RPUSD2	Q8IZ73	545 aa	Known RBP	16.47	■□□□□ 0.23
DDX39A-209	ENST00000589318	SPC25	Q9HBM1	224 aa		16.47	■□□□□ 0.23
DDX39A-209	ENST00000589318	ANO9	A1A5B4	782 aa		16.46	■□□□□ 0.23
DDX39A-209	ENST00000589318	PPP1R12A	O14974	1030 aa	Predicted RBP	16.46	■□□□□ 0.23
DDX39A-209	ENST00000589318	EIF3H	O15372	352 aa	Known RBP eCLIP	16.46	■□□□□ 0.23
DDX39A-209	ENST00000589318	TACC1	O75410	805 aa		16.46	■□□□□ 0.23
DDX39A-209	ENST00000589318	KIAA0754	O94854	1291 aa		16.46	■□□□□ 0.23
DDX39A-209	ENST00000589318	TFRC	P02786	760 aa	Known RBP	16.46	■□□□□ 0.23
DDX39A-209	ENST00000589318	H2AFZ	P0C0S5	128 aa		16.46	■□□□□ 0.23
DDX39A-209	ENST00000589318	CYP11B1	P15538	503 aa		16.46	■□□□□ 0.23
DDX39A-209	ENST00000589318	CCT5	P48643	541 aa		16.46	■□□□□ 0.23
DDX39A-209	ENST00000589318	MYL6	P60660	151 aa		16.46	■□□□□ 0.23
DDX39A-209	ENST00000589318	FMO1	Q01740	532 aa		16.46	■□□□□ 0.23
DDX39A-209	ENST00000589318	PCBP1	Q15365	356 aa	Known RBP eCLIP	16.46	■□□□□ 0.23
DDX39A-209	ENST00000589318	KYAT1	Q16773	422 aa		16.46	■□□□□ 0.23
DDX39A-209	ENST00000589318	PAPD7	Q5XG87	772 aa	Known RBP	16.46	■□□□□ 0.23
DDX39A-209	ENST00000589318	H2AFV	Q71UI9	128 aa		16.46	■□□□□ 0.23
DDX39A-209	ENST00000589318	CATSPER4	Q7RTX7	472 aa		16.46	■□□□□ 0.23
DDX39A-209	ENST00000589318	TMEM130	Q8N3G9	435 aa		16.46	■□□□□ 0.23
DDX39A-209	ENST00000589318	UBR7	Q8N806	425 aa		16.46	■□□□□ 0.23
DDX39A-209	ENST00000589318	CXorf38	Q8TB03	319 aa		16.46	■□□□□ 0.23
DDX39A-209	ENST00000589318	NOX5	Q96PH1	765 aa		16.46	■□□□□ 0.23
DDX39A-209	ENST00000589318	PCDHB18P	Q96TA0	734 aa		16.46	■□□□□ 0.23
DDX39A-209	ENST00000589318	CAPS2	Q9BXY5	557 aa		16.46	■□□□□ 0.23
DDX39A-209	ENST00000589318	XYLT2	Q9H1B5	865 aa		16.46	■□□□□ 0.23
DDX39A-209	ENST00000589318	SIX4	Q9UIU6	781 aa		16.46	■□□□□ 0.23
DDX39A-209	ENST00000589318	GOLGA6C	A6NDK9	693 aa		16.45	■□□□□ 0.22
DDX39A-209	ENST00000589318	HMGCR	P04035	888 aa		16.45	■□□□□ 0.22
DDX39A-209	ENST00000589318	TMEM191B	P0C7N4	346 aa		16.45	■□□□□ 0.22
DDX39A-209	ENST00000589318	GOLGA6D	P0CG33	693 aa		16.45	■□□□□ 0.22
DDX39A-209	ENST00000589318	CST5	P28325	142 aa	Predicted RBP	16.45	■□□□□ 0.22
DDX39A-209	ENST00000589318	GRM5	P41594	1212 aa		16.45	■□□□□ 0.22
DDX39A-209	ENST00000589318	GALC	P54803	685 aa		16.45	■□□□□ 0.22
DDX39A-209	ENST00000589318	JADE1	Q6IE81	842 aa		16.45	■□□□□ 0.22
DDX39A-209	ENST00000589318	GDF6	Q6KF10	455 aa	Predicted RBP	16.45	■□□□□ 0.22
DDX39A-209	ENST00000589318	NME8	Q8N427	588 aa		16.45	■□□□□ 0.22
DDX39A-209	ENST00000589318	ADPGK	Q9BRR6	497 aa		16.45	■□□□□ 0.22
DDX39A-209	ENST00000589318	ASB7	Q9H672	318 aa		16.45	■□□□□ 0.22
DDX39A-209	ENST00000589318	GOLGA6A	Q9NYA3	693 aa		16.45	■□□□□ 0.22
DDX39A-209	ENST00000589318	CNTN6	Q9UQ52	1028 aa		16.45	■□□□□ 0.22
DDX39A-209	ENST00000589318	PCDHGC5	Q9Y5F6	944 aa		16.45	■□□□□ 0.22
DDX39A-209	ENST00000589318	MROH7	Q68CQ1	1323 aa		16.45	■□□□□ 0.22
DDX39A-209	ENST00000589318	PDCD11	Q14690	1871 aa	Known RBP	16.45	■□□□□ 0.22
DDX39A-209	ENST00000589318	CALCA	P01258	141 aa		16.45	■□□□□ 0.22
DDX39A-209	ENST00000589318	ASGR1	P07306	291 aa		16.45	■□□□□ 0.22
DDX39A-209	ENST00000589318	MME	P08473	750 aa		16.45	■□□□□ 0.22
DDX39A-209	ENST00000589318	KCNA10	Q16322	511 aa		16.45	■□□□□ 0.22
DDX39A-209	ENST00000589318	DCAF4L1	Q3SXM0	396 aa		16.45	■□□□□ 0.22
DDX39A-209	ENST00000589318	TAF2	Q6P1X5	1199 aa		16.45	■□□□□ 0.22
DDX39A-209	ENST00000589318	SLC27A1	Q6PCB7	646 aa		16.45	■□□□□ 0.22
DDX39A-209	ENST00000589318	C1orf127	Q8N9H9	656 aa		16.45	■□□□□ 0.22
DDX39A-209	ENST00000589318	WNT8B	Q93098	351 aa		16.45	■□□□□ 0.22
DDX39A-209	ENST00000589318	ANKRD36BP1	Q96IX9	119 aa		16.45	■□□□□ 0.22
DDX39A-209	ENST00000589318	EIF2A	Q9BY44	585 aa	Known RBP	16.45	■□□□□ 0.22
DDX39A-209	ENST00000589318	ISCU	Q9H1K1	167 aa		16.45	■□□□□ 0.22
DDX39A-209	ENST00000589318	GGA2	Q9UJY4	613 aa		16.45	■□□□□ 0.22
DDX39A-209	ENST00000589318	GRIN2D	O15399	1336 aa		16.44	■□□□□ 0.22
DDX39A-209	ENST00000589318		A0A0A6YYK5	440 aa	Predicted RBP	16.44	■□□□□ 0.22
DDX39A-209	ENST00000589318	OPA1	O60313	960 aa		16.44	■□□□□ 0.22
DDX39A-209	ENST00000589318	NPTXR	O95502	500 aa		16.44	■□□□□ 0.22
DDX39A-209	ENST00000589318	TNNC2	P02585	160 aa		16.44	■□□□□ 0.22
DDX39A-209	ENST00000589318	KRT5	P13647	590 aa		16.44	■□□□□ 0.22
DDX39A-209	ENST00000589318	TBXAS1	P24557	533 aa	Predicted RBP	16.44	■□□□□ 0.22
DDX39A-209	ENST00000589318	HOXD10	P28358	340 aa		16.44	■□□□□ 0.22
DDX39A-209	ENST00000589318	PDE6C	P51160	858 aa		16.44	■□□□□ 0.22
DDX39A-209	ENST00000589318	CRYBB1	P53674	252 aa	Predicted RBP	16.44	■□□□□ 0.22
DDX39A-209	ENST00000589318	CDR2	Q01850	454 aa		16.44	■□□□□ 0.22
DDX39A-209	ENST00000589318	CCDC70	Q6NSX1	233 aa		16.44	■□□□□ 0.22
DDX39A-209	ENST00000589318	NOTUM	Q6P988	496 aa		16.44	■□□□□ 0.22
DDX39A-209	ENST00000589318	CCDC50	Q8IVM0	306 aa		16.44	■□□□□ 0.22
DDX39A-209	ENST00000589318	NCAN	O14594	1321 aa		16.44	■□□□□ 0.22
DDX39A-209	ENST00000589318	FRMPD3	Q5JV73	1810 aa		16.44	■□□□□ 0.22
DDX39A-209	ENST00000589318	ANKRD65	E5RJM6	399 aa		16.43	■□□□□ 0.22
DDX39A-209	ENST00000589318	TMEM253	P0C7T8	217 aa		16.43	■□□□□ 0.22
DDX39A-209	ENST00000589318	SKOR1	P84550	965 aa		16.43	■□□□□ 0.22
DDX39A-209	ENST00000589318	SGSM1	Q2NKQ1	1148 aa		16.43	■□□□□ 0.22
DDX39A-209	ENST00000589318	BCAS4	Q8TDM0	211 aa		16.43	■□□□□ 0.22
DDX39A-209	ENST00000589318	PXYLP1	Q8TE99	480 aa		16.43	■□□□□ 0.22
DDX39A-209	ENST00000589318	ACAP3	Q96P50	834 aa		16.43	■□□□□ 0.22
DDX39A-209	ENST00000589318	ALS2CR12	Q96Q35	445 aa		16.43	■□□□□ 0.22
DDX39A-209	ENST00000589318	IMPG2	Q9BZV3	1241 aa		16.43	■□□□□ 0.22
DDX39A-209	ENST00000589318	CXCL16	Q9H2A7	254 aa		16.43	■□□□□ 0.22
DDX39A-209	ENST00000589318	SEPT11	Q9NVA2	429 aa	Known RBP	16.43	■□□□□ 0.22
DDX39A-209	ENST00000589318	GRID2IP	A4D2P6	1211 aa		16.43	■□□□□ 0.22
DDX39A-209	ENST00000589318	PALM	O75781	387 aa		16.43	■□□□□ 0.22
DDX39A-209	ENST00000589318	CLSTN1	O94985	981 aa		16.43	■□□□□ 0.22
DDX39A-209	ENST00000589318	AXL	P30530	894 aa		16.43	■□□□□ 0.22

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms