RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 PCDHB8Q9UN66 801 aa10.69□□□□□ -0.7
PTPN2-208ENST00000589216 DERAQ9Y315 318 aa10.69□□□□□ -0.7
PTPN2-208ENST00000589216 C2CD2Q9Y426 696 aa10.69□□□□□ -0.7
PTPN2-208ENST00000589216 BACE2Q9Y5Z0 518 aa10.69□□□□□ -0.7
PTPN2-208ENST00000589216 MUC6Q6W4X9 2439 aa10.69□□□□□ -0.7
PTPN2-208ENST00000589216 ZDBF2Q9HCK1 2354 aa10.69□□□□□ -0.7
PTPN2-208ENST00000589216 ZNF318Q5VUA4 2279 aa10.69□□□□□ -0.7
PTPN2-208ENST00000589216 PI4K2BG5E9Z4 385 aa10.68□□□□□ -0.7
PTPN2-208ENST00000589216 PIRO00625 290 aa10.68□□□□□ -0.7
PTPN2-208ENST00000589216 NRG2O14511 850 aaPredicted RBP10.68□□□□□ -0.7
PTPN2-208ENST00000589216 CLIC2O15247 247 aa10.68□□□□□ -0.7
PTPN2-208ENST00000589216 XPOTO43592 962 aaKnown RBP10.68□□□□□ -0.7
PTPN2-208ENST00000589216 DCXO43602 365 aa10.68□□□□□ -0.7
PTPN2-208ENST00000589216 IL18RAPO95256 599 aa10.68□□□□□ -0.7
PTPN2-208ENST00000589216 RPN1P04843 607 aaKnown RBP10.68□□□□□ -0.7
PTPN2-208ENST00000589216 CDR1P51861 262 aa10.68□□□□□ -0.7
PTPN2-208ENST00000589216 ARPP19P56211 112 aa10.68□□□□□ -0.7
PTPN2-208ENST00000589216 LILRA4P59901 499 aa10.68□□□□□ -0.7
PTPN2-208ENST00000589216 CTXN3Q4LDR2 81 aa10.68□□□□□ -0.7
PTPN2-208ENST00000589216 SLC8B1Q6J4K2 584 aa10.68□□□□□ -0.7
PTPN2-208ENST00000589216 ZNF280DQ6N043 979 aa10.68□□□□□ -0.7
PTPN2-208ENST00000589216 PDXDC1Q6P996 788 aa10.68□□□□□ -0.7
PTPN2-208ENST00000589216 STXBP4Q6ZWJ1 553 aa10.68□□□□□ -0.7
PTPN2-208ENST00000589216 FMR1NBQ8N0W7 255 aaPredicted RBP10.68□□□□□ -0.7
PTPN2-208ENST00000589216 OR5B17Q8NGF7 314 aa10.68□□□□□ -0.7
PTPN2-208ENST00000589216 OR10T2Q8NGX3 314 aa10.68□□□□□ -0.7
PTPN2-208ENST00000589216 PLEKHO2Q8TD55 490 aa10.68□□□□□ -0.7
PTPN2-208ENST00000589216 TMEM209Q96SK2 561 aa10.68□□□□□ -0.7
PTPN2-208ENST00000589216 PLEKHA4Q9H4M7 779 aa10.68□□□□□ -0.7
PTPN2-208ENST00000589216 HCFC1R1Q9NWW0 138 aa10.68□□□□□ -0.7
PTPN2-208ENST00000589216 DPP3Q9NY33 737 aa10.68□□□□□ -0.7
PTPN2-208ENST00000589216 USP25Q9UHP3 1055 aa10.68□□□□□ -0.7
PTPN2-208ENST00000589216 SIX4Q9UIU6 781 aa10.68□□□□□ -0.7
PTPN2-208ENST00000589216 KMT2EQ8IZD2 1858 aa10.68□□□□□ -0.7
PTPN2-208ENST00000589216 COL4A3Q01955 1670 aa10.67□□□□□ -0.7
PTPN2-208ENST00000589216 TULP1O00294 542 aaPredicted RBP10.67□□□□□ -0.7
PTPN2-208ENST00000589216 CCL16O15467 120 aa10.67□□□□□ -0.7
PTPN2-208ENST00000589216 ZNF202O95125 648 aa10.67□□□□□ -0.7
PTPN2-208ENST00000589216 SEC24AO95486 1093 aa10.67□□□□□ -0.7
PTPN2-208ENST00000589216 ITGB3P05106 788 aa10.67□□□□□ -0.7
PTPN2-208ENST00000589216 ASGR2P07307 311 aa10.67□□□□□ -0.7
PTPN2-208ENST00000589216 POLR2BP30876 1174 aaKnown RBP10.67□□□□□ -0.7
PTPN2-208ENST00000589216 POU5F1Q01860 360 aaKnown RBP10.67□□□□□ -0.7
PTPN2-208ENST00000589216 CCDC142Q17RM4 750 aa10.67□□□□□ -0.7
PTPN2-208ENST00000589216 ATAT1Q5SQI0 421 aa10.67□□□□□ -0.7
PTPN2-208ENST00000589216 LIN9Q5TKA1 542 aa10.67□□□□□ -0.7
PTPN2-208ENST00000589216 DSTYKQ6XUX3 929 aa10.67□□□□□ -0.7
PTPN2-208ENST00000589216 CCDC149Q6ZUS6 474 aa10.67□□□□□ -0.7
PTPN2-208ENST00000589216 SMYD4Q8IYR2 804 aaPredicted RBP10.67□□□□□ -0.7
PTPN2-208ENST00000589216 TTC9BQ8N6N2 239 aa10.67□□□□□ -0.7
PTPN2-208ENST00000589216 TDRD5Q8NAT2 981 aaKnown RBP10.67□□□□□ -0.7
PTPN2-208ENST00000589216 ENGASEQ8NFI3 743 aa10.67□□□□□ -0.7
PTPN2-208ENST00000589216 ST13P5Q8NFI4 369 aaPredicted RBP10.67□□□□□ -0.7
PTPN2-208ENST00000589216 HDAC7Q8WUI4 952 aa10.67□□□□□ -0.7
PTPN2-208ENST00000589216 ERCC4Q92889 916 aaPredicted RBP10.67□□□□□ -0.7
PTPN2-208ENST00000589216 BORCS6Q96GS4 357 aa10.67□□□□□ -0.7
PTPN2-208ENST00000589216 SENP8Q96LD8 212 aa10.67□□□□□ -0.7
PTPN2-208ENST00000589216 TSPAN18Q96SJ8 248 aa10.67□□□□□ -0.7
PTPN2-208ENST00000589216 RTP3Q9BQQ7 232 aa10.67□□□□□ -0.7
PTPN2-208ENST00000589216 PRKD2Q9BZL6 878 aa10.67□□□□□ -0.7
PTPN2-208ENST00000589216 CRISPLD1Q9H336 500 aa10.67□□□□□ -0.7
PTPN2-208ENST00000589216 KCTD10Q9H3F6 313 aa10.67□□□□□ -0.7
PTPN2-208ENST00000589216 ZDHHC7Q9NXF8 308 aa10.67□□□□□ -0.7
PTPN2-208ENST00000589216 OBSL1O75147 1896 aa10.67□□□□□ -0.7
PTPN2-208ENST00000589216 PTPRDP23468 1912 aa10.66□□□□□ -0.7
PTPN2-208ENST00000589216 HCRTO43612 131 aa10.66□□□□□ -0.7
PTPN2-208ENST00000589216 GADD45BO75293 160 aaPredicted RBP10.66□□□□□ -0.7
PTPN2-208ENST00000589216 ABLIM3O94929 683 aa10.66□□□□□ -0.7
PTPN2-208ENST00000589216 LDHAP00338 332 aaKnown RBP10.66□□□□□ -0.7
PTPN2-208ENST00000589216 C1RP00736 705 aa10.66□□□□□ -0.7
PTPN2-208ENST00000589216 CPB1P15086 417 aa10.66□□□□□ -0.7
PTPN2-208ENST00000589216 CASP4P49662 377 aa10.66□□□□□ -0.7
PTPN2-208ENST00000589216 TAF6P49848 677 aa10.66□□□□□ -0.7
PTPN2-208ENST00000589216 YWHAHQ04917 246 aaPredicted RBP10.66□□□□□ -0.7
PTPN2-208ENST00000589216 CYP24A1Q07973 514 aa10.66□□□□□ -0.7
PTPN2-208ENST00000589216 PNOCQ13519 176 aa10.66□□□□□ -0.7
PTPN2-208ENST00000589216 SNW1Q13573 536 aaKnown RBP10.66□□□□□ -0.7
PTPN2-208ENST00000589216 SNRNP35Q16560 246 aaKnown RBP10.66□□□□□ -0.7
PTPN2-208ENST00000589216 PTPN21Q16825 1174 aa10.66□□□□□ -0.7
PTPN2-208ENST00000589216 KNOP1Q1ED39 458 aaKnown RBP10.66□□□□□ -0.7
PTPN2-208ENST00000589216 PPM1LQ5SGD2 360 aa10.66□□□□□ -0.7
PTPN2-208ENST00000589216 OVOS1Q6IE37 1185 aa10.66□□□□□ -0.7
PTPN2-208ENST00000589216 RNF19BQ6ZMZ0 732 aa10.66□□□□□ -0.7
PTPN2-208ENST00000589216 GET4Q7L5D6 327 aaPredicted RBP10.66□□□□□ -0.7
PTPN2-208ENST00000589216 GRASPQ7Z6J2 395 aaPredicted RBP10.66□□□□□ -0.7
PTPN2-208ENST00000589216 RDH13Q8NBN7 331 aa10.66□□□□□ -0.7
PTPN2-208ENST00000589216 APPL2Q8NEU8 664 aa10.66□□□□□ -0.7
PTPN2-208ENST00000589216 PGLYRP2Q96PD5 576 aa10.66□□□□□ -0.7
PTPN2-208ENST00000589216 MYADMQ96S97 322 aa10.66□□□□□ -0.7
PTPN2-208ENST00000589216 RHOBTB2Q9BYZ6 727 aa10.66□□□□□ -0.7
PTPN2-208ENST00000589216 WDR6Q9NNW5 1121 aaKnown RBP10.66□□□□□ -0.7
PTPN2-208ENST00000589216 RAPGEFL1Q9UHV5 662 aa10.66□□□□□ -0.7
PTPN2-208ENST00000589216 ZNF233A6NK53 670 aa10.65□□□□□ -0.7
PTPN2-208ENST00000589216 H7C4K7 107 aa10.65□□□□□ -0.7
PTPN2-208ENST00000589216 KIAA0391O15091 583 aaKnown RBP10.65□□□□□ -0.7
PTPN2-208ENST00000589216 RHOBTB3O94955 611 aa10.65□□□□□ -0.7
PTPN2-208ENST00000589216 OAZ2O95190 189 aa10.65□□□□□ -0.7
PTPN2-208ENST00000589216 MYL1P05976 194 aa10.65□□□□□ -0.7
PTPN2-208ENST00000589216 HNRNPA1P09651 372 aaKnown RBP eCLIP10.65□□□□□ -0.7
PTPN2-208ENST00000589216 TMEM191BP0C7N4 346 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms