RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 ACTR2P61160 394 aa7.9□□□□□ -1.15
ZNF540-206ENST00000589117 LSM11P83369 360 aaKnown RBP eCLIP7.9□□□□□ -1.15
ZNF540-206ENST00000589117 PRKCEQ02156 737 aa7.9□□□□□ -1.15
ZNF540-206ENST00000589117 COL19A1Q14993 1142 aa7.9□□□□□ -1.15
ZNF540-206ENST00000589117 PSMD6Q15008 389 aa7.9□□□□□ -1.15
ZNF540-206ENST00000589117 PPP1R7Q15435 360 aa7.9□□□□□ -1.15
ZNF540-206ENST00000589117 CLEC16AQ2KHT3 1053 aa7.9□□□□□ -1.15
ZNF540-206ENST00000589117 TTC19Q6DKK2 380 aaPredicted RBP7.9□□□□□ -1.15
ZNF540-206ENST00000589117 FOXR1Q6PIV2 292 aa7.9□□□□□ -1.15
ZNF540-206ENST00000589117 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.9□□□□□ -1.15
ZNF540-206ENST00000589117 SLC13A5Q86YT5 568 aaPredicted RBP7.9□□□□□ -1.15
ZNF540-206ENST00000589117 EXOC8Q8IYI6 725 aa7.9□□□□□ -1.15
ZNF540-206ENST00000589117 OTUD6BQ8N6M0 293 aa7.9□□□□□ -1.15
ZNF540-206ENST00000589117 DEPTORQ8TB45 409 aa7.9□□□□□ -1.15
ZNF540-206ENST00000589117 PLEKHO2Q8TD55 490 aa7.9□□□□□ -1.15
ZNF540-206ENST00000589117 TAS1R2Q8TE23 839 aa7.9□□□□□ -1.15
ZNF540-206ENST00000589117 SEMA4DQ92854 862 aa7.9□□□□□ -1.15
ZNF540-206ENST00000589117 GLG1Q92896 1179 aa7.9□□□□□ -1.15
ZNF540-206ENST00000589117 VCPIP1Q96JH7 1222 aa7.9□□□□□ -1.15
ZNF540-206ENST00000589117 PCDHB18PQ96TA0 734 aa7.9□□□□□ -1.15
ZNF540-206ENST00000589117 IMPG2Q9BZV3 1241 aa7.9□□□□□ -1.15
ZNF540-206ENST00000589117 POLR3FQ9H1D9 316 aaPredicted RBP7.9□□□□□ -1.15
ZNF540-206ENST00000589117 AVENQ9NQS1 362 aaPredicted RBP7.9□□□□□ -1.15
ZNF540-206ENST00000589117 NRBP2Q9NSY0 501 aa7.9□□□□□ -1.15
ZNF540-206ENST00000589117 CYP39A1Q9NYL5 469 aa7.9□□□□□ -1.15
ZNF540-206ENST00000589117 ARHGAP28Q9P2N2 729 aa7.9□□□□□ -1.15
ZNF540-206ENST00000589117 LCMT1Q9UIC8 334 aa7.9□□□□□ -1.15
ZNF540-206ENST00000589117 ADAMTS5Q9UNA0 930 aa7.9□□□□□ -1.15
ZNF540-206ENST00000589117 TNS1Q9HBL0 1735 aaKnown RBP7.9□□□□□ -1.15
ZNF540-206ENST00000589117 RBBP6Q7Z6E9 1792 aaKnown RBP7.89□□□□□ -1.15
ZNF540-206ENST00000589117 GMNCA6NCL1 334 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 E7EVH7 732 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 GAS8O95995 478 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 NAMPTP43490 491 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 GMPSP49915 693 aaPredicted RBP7.89□□□□□ -1.15
ZNF540-206ENST00000589117 AP3M2P53677 418 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 HMGCS2P54868 508 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 GUCY1A3Q02108 690 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 CAV1Q03135 178 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 ADCY2Q08462 1091 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 UAP1Q16222 522 aaPredicted RBP7.89□□□□□ -1.15
ZNF540-206ENST00000589117 PTGISQ16647 500 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 CYP1B1Q16678 543 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 SUPT20HL1Q3ZLR7 823 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 TBC1D10BQ4KMP7 808 aaPredicted RBP7.89□□□□□ -1.15
ZNF540-206ENST00000589117 NBPF12Q5TAG4 269 aaPredicted RBP7.89□□□□□ -1.15
ZNF540-206ENST00000589117 ABHD15Q6UXT9 468 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 CEP128Q6ZU80 1094 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 PRELID2Q8N945 189 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 CHST13Q8NET6 341 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.89□□□□□ -1.15
ZNF540-206ENST00000589117 ZNF516Q92618 1163 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 CD101Q93033 1021 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 WNT2BQ93097 391 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 MPHOSPH6Q99547 160 aaKnown RBP7.89□□□□□ -1.15
ZNF540-206ENST00000589117 POP1Q99575 1024 aaKnown RBP7.89□□□□□ -1.15
ZNF540-206ENST00000589117 TINF2Q9BSI4 451 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 TRIM51Q9BSJ1 452 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 C1QTNF2Q9BXJ5 285 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 PDLIM7Q9NR12 457 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 FBXO40Q9UH90 709 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 AGO2Q9UKV8 859 aaKnown RBP7.89□□□□□ -1.15
ZNF540-206ENST00000589117 RIPK3Q9Y572 518 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 PPP2R3BQ9Y5P8 575 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 GJA3Q9Y6H8 435 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 FAM169AQ9Y6X4 670 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 TNFRSF10BO14763 440 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 ZNF862O60290 1169 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 SUPT20HL2P0C7V6 817 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 PYGMP11217 842 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 ATP5DP30049 168 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 COILP38432 576 aaPredicted RBP7.89□□□□□ -1.15
ZNF540-206ENST00000589117 PIK3CAP42336 1068 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 SP4Q02446 784 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 SGO2Q562F6 1265 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 CATSPERGQ6ZRH7 1159 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 TAOK1Q7L7X3 1001 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 DPH6Q7L8W6 267 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 YTHDF3Q7Z739 585 aaKnown RBP7.89□□□□□ -1.15
ZNF540-206ENST00000589117 PSPC1Q8WXF1 523 aaKnown RBP7.89□□□□□ -1.15
ZNF540-206ENST00000589117 KRT35Q92764 455 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 KCNN1Q92952 543 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 KAT5Q92993 513 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 C18orf8Q96DM3 657 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 PGM2Q96G03 612 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 CCT8L2Q96SF2 557 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 KIFC3Q9BVG8 833 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 NEUROG2Q9H2A3 272 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 LRRC19Q9H756 370 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 ZNF302Q9NR11 478 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 ZDHHC18Q9NUE0 388 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 ANAPC7Q9UJX3 599 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 ZNF214Q9UL59 606 aaPredicted RBP7.89□□□□□ -1.15
ZNF540-206ENST00000589117 BCS1LQ9Y276 419 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 SNX24Q9Y343 169 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 PPME1Q9Y570 386 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 SCINQ9Y6U3 715 aa7.89□□□□□ -1.15
ZNF540-206ENST00000589117 ERVH48-1M5A8F1 160 aa7.88□□□□□ -1.15
ZNF540-206ENST00000589117 RGS16O15492 202 aaPredicted RBP7.88□□□□□ -1.15
ZNF540-206ENST00000589117 RARGP13631 454 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms