RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 KLHL18O94889 574 aa8.89□□□□□ -0.99
VMP1-208ENST00000588617 KNG1P01042 644 aa8.89□□□□□ -0.99
VMP1-208ENST00000588617 MTHFD1P11586 935 aaKnown RBP8.89□□□□□ -0.99
VMP1-208ENST00000588617 XBP1P17861 261 aa8.89□□□□□ -0.99
VMP1-208ENST00000588617 FBLN1P23142 703 aa8.89□□□□□ -0.99
VMP1-208ENST00000588617 KRT9P35527 623 aa8.89□□□□□ -0.99
VMP1-208ENST00000588617 ALDH1A3P47895 512 aa8.89□□□□□ -0.99
VMP1-208ENST00000588617 SP140Q13342 867 aa8.89□□□□□ -0.99
VMP1-208ENST00000588617 ADAM15Q13444 863 aa8.89□□□□□ -0.99
VMP1-208ENST00000588617 KIF22Q14807 665 aa8.89□□□□□ -0.99
VMP1-208ENST00000588617 TOMM20Q15388 145 aa8.89□□□□□ -0.99
VMP1-208ENST00000588617 ZNF280DQ6N043 979 aa8.89□□□□□ -0.99
VMP1-208ENST00000588617 NFXL1Q6ZNB6 911 aa8.89□□□□□ -0.99
VMP1-208ENST00000588617 TMTC1Q8IUR5 882 aa8.89□□□□□ -0.99
VMP1-208ENST00000588617 SLC15A4Q8N697 577 aa8.89□□□□□ -0.99
VMP1-208ENST00000588617 DNAJC5GQ8N7S2 189 aa8.89□□□□□ -0.99
VMP1-208ENST00000588617 VGLL2Q8N8G2 317 aa8.89□□□□□ -0.99
VMP1-208ENST00000588617 OR56A3Q8NH54 315 aa8.89□□□□□ -0.99
VMP1-208ENST00000588617 STT3BQ8TCJ2 826 aa8.89□□□□□ -0.99
VMP1-208ENST00000588617 GORASP1Q9BQQ3 440 aa8.89□□□□□ -0.99
VMP1-208ENST00000588617 PYM1Q9BRP8 204 aaKnown RBP8.89□□□□□ -0.99
VMP1-208ENST00000588617 RIC8AQ9NPQ8 531 aa8.89□□□□□ -0.99
VMP1-208ENST00000588617 WASH6PQ9NQA3 447 aa8.89□□□□□ -0.99
VMP1-208ENST00000588617 JADE2Q9NQC1 790 aa8.89□□□□□ -0.99
VMP1-208ENST00000588617 RGL1Q9NZL6 768 aa8.89□□□□□ -0.99
VMP1-208ENST00000588617 CFAP97Q9P2B7 532 aa8.89□□□□□ -0.99
VMP1-208ENST00000588617 KIF17Q9P2E2 1029 aa8.89□□□□□ -0.99
VMP1-208ENST00000588617 SCAF8Q9UPN6 1271 aaKnown RBP8.89□□□□□ -0.99
VMP1-208ENST00000588617 C2orf78A6NCI8 922 aa8.88□□□□□ -0.99
VMP1-208ENST00000588617 PRSS29PA6NIE9 313 aa8.88□□□□□ -0.99
VMP1-208ENST00000588617 RASSF9O75901 435 aa8.88□□□□□ -0.99
VMP1-208ENST00000588617 HMGCRP04035 888 aa8.88□□□□□ -0.99
VMP1-208ENST00000588617 CHGBP05060 677 aa8.88□□□□□ -0.99
VMP1-208ENST00000588617 GJB1P08034 283 aa8.88□□□□□ -0.99
VMP1-208ENST00000588617 RAP2AP10114 183 aa8.88□□□□□ -0.99
VMP1-208ENST00000588617 TXNP10599 105 aaKnown RBP8.88□□□□□ -0.99
VMP1-208ENST00000588617 KLRC1P26715 233 aa8.88□□□□□ -0.99
VMP1-208ENST00000588617 GABRB3P28472 473 aa8.88□□□□□ -0.99
VMP1-208ENST00000588617 VIPR1P32241 457 aa8.88□□□□□ -0.99
VMP1-208ENST00000588617 KIR2DL3P43628 341 aa8.88□□□□□ -0.99
VMP1-208ENST00000588617 TARBP2Q15633 366 aaKnown RBP8.88□□□□□ -0.99
VMP1-208ENST00000588617 ADCK5Q3MIX3 580 aa8.88□□□□□ -0.99
VMP1-208ENST00000588617 ARHGAP15Q53QZ3 475 aa8.88□□□□□ -0.99
VMP1-208ENST00000588617 TANGO2Q6ICL3 276 aa8.88□□□□□ -0.99
VMP1-208ENST00000588617 ZNF572Q7Z3I7 529 aaPredicted RBP8.88□□□□□ -0.99
VMP1-208ENST00000588617 TBC1D1Q86TI0 1168 aaPredicted RBP8.88□□□□□ -0.99
VMP1-208ENST00000588617 LRRTM4Q86VH4 590 aa8.88□□□□□ -0.99
VMP1-208ENST00000588617 DTX1Q86Y01 620 aa8.88□□□□□ -0.99
VMP1-208ENST00000588617 TP53INP2Q8IXH6 220 aa8.88□□□□□ -0.99
VMP1-208ENST00000588617 FTSJ3Q8IY81 847 aaKnown RBP8.88□□□□□ -0.99
VMP1-208ENST00000588617 FAM9BQ8IZU0 186 aa8.88□□□□□ -0.99
VMP1-208ENST00000588617 IL17RDQ8NFM7 739 aa8.88□□□□□ -0.99
VMP1-208ENST00000588617 SNX27Q96L92 541 aa8.88□□□□□ -0.99
VMP1-208ENST00000588617 PACSIN1Q9BY11 444 aa8.88□□□□□ -0.99
VMP1-208ENST00000588617 UBN1Q9NPG3 1134 aa8.88□□□□□ -0.99
VMP1-208ENST00000588617 HDAC9Q9UKV0 1011 aa8.88□□□□□ -0.99
VMP1-208ENST00000588617 TMEM98Q9Y2Y6 226 aa8.88□□□□□ -0.99
VMP1-208ENST00000588617 RBM8AQ9Y5S9 174 aaKnown RBP8.88□□□□□ -0.99
VMP1-208ENST00000588617 TISP43B9A030 160 aa8.87□□□□□ -0.99
VMP1-208ENST00000588617 B9A039 149 aa8.87□□□□□ -0.99
VMP1-208ENST00000588617 MYO1CO00159 1063 aa8.87□□□□□ -0.99
VMP1-208ENST00000588617 TCERG1O14776 1098 aaKnown RBP8.87□□□□□ -0.99
VMP1-208ENST00000588617 CYP7B1O75881 506 aa8.87□□□□□ -0.99
VMP1-208ENST00000588617 UNC5CO95185 931 aa8.87□□□□□ -0.99
VMP1-208ENST00000588617 GNAI2P04899 355 aa8.87□□□□□ -0.99
VMP1-208ENST00000588617 ITGA5P08648 1049 aa8.87□□□□□ -0.99
VMP1-208ENST00000588617 IDEP14735 1019 aa8.87□□□□□ -0.99
VMP1-208ENST00000588617 CAPN3P20807 821 aa8.87□□□□□ -0.99
VMP1-208ENST00000588617 SMAD4Q13485 552 aaKnown RBP8.87□□□□□ -0.99
VMP1-208ENST00000588617 FAM110CQ1W6H9 321 aa8.87□□□□□ -0.99
VMP1-208ENST00000588617 DCAF12L1Q5VU92 463 aa8.87□□□□□ -0.99
VMP1-208ENST00000588617 AFMIDQ63HM1 303 aa8.87□□□□□ -0.99
VMP1-208ENST00000588617 LIN54Q6MZP7 749 aa8.87□□□□□ -0.99
VMP1-208ENST00000588617 USP49Q70CQ1 688 aa8.87□□□□□ -0.99
VMP1-208ENST00000588617 YAF2Q8IY57 180 aa8.87□□□□□ -0.99
VMP1-208ENST00000588617 ZDHHC14Q8IZN3 488 aa8.87□□□□□ -0.99
VMP1-208ENST00000588617 AGBL5Q8NDL9 886 aa8.87□□□□□ -0.99
VMP1-208ENST00000588617 GCDHQ92947 438 aaPredicted RBP8.87□□□□□ -0.99
VMP1-208ENST00000588617 KIRREL1Q96J84 757 aa8.87□□□□□ -0.99
VMP1-208ENST00000588617 PRPF18Q99633 342 aaKnown RBP8.87□□□□□ -0.99
VMP1-208ENST00000588617 KATNAL1Q9BW62 490 aa8.87□□□□□ -0.99
VMP1-208ENST00000588617 OSBPL5Q9H0X9 879 aaPredicted RBP8.87□□□□□ -0.99
VMP1-208ENST00000588617 TMEM8AQ9HCN3 771 aa8.87□□□□□ -0.99
VMP1-208ENST00000588617 SLC13A4Q9UKG4 626 aa8.87□□□□□ -0.99
VMP1-208ENST00000588617 FAM184BQ9ULE4 1060 aa8.87□□□□□ -0.99
VMP1-208ENST00000588617 A0A0B4J269 797 aa8.86□□□□□ -0.99
VMP1-208ENST00000588617 A6NLC8 198 aa8.86□□□□□ -0.99
VMP1-208ENST00000588617 EXOC5O00471 708 aa8.86□□□□□ -0.99
VMP1-208ENST00000588617 KIAA0391O15091 583 aaKnown RBP8.86□□□□□ -0.99
VMP1-208ENST00000588617 RARBP10826 455 aa8.86□□□□□ -0.99
VMP1-208ENST00000588617 ATF2P15336 505 aa8.86□□□□□ -0.99
VMP1-208ENST00000588617 ALOX15P16050 662 aaPredicted RBP8.86□□□□□ -0.99
VMP1-208ENST00000588617 IL1R2P27930 398 aa8.86□□□□□ -0.99
VMP1-208ENST00000588617 SLC11A2P49281 568 aa8.86□□□□□ -0.99
VMP1-208ENST00000588617 MEOX1P50221 254 aa8.86□□□□□ -0.99
VMP1-208ENST00000588617 MXRA7P84157 204 aa8.86□□□□□ -0.99
VMP1-208ENST00000588617 TRMT10BQ6PF06 316 aaKnown RBP8.86□□□□□ -0.99
VMP1-208ENST00000588617 KLHL17Q6TDP4 642 aa8.86□□□□□ -0.99
VMP1-208ENST00000588617 B3GNT8Q7Z7M8 397 aa8.86□□□□□ -0.99
VMP1-208ENST00000588617 HEATR4Q86WZ0 1026 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms