RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 SOX4Q06945 474 aaPredicted RBP9.39□□□□□ -0.91
SDF2-204ENST00000587338 ZNF252P-AS1Q0IIN9 211 aa9.39□□□□□ -0.91
SDF2-204ENST00000587338 CTXN3Q4LDR2 81 aa9.39□□□□□ -0.91
SDF2-204ENST00000587338 RALGPS2Q86X27 583 aaPredicted RBP9.39□□□□□ -0.91
SDF2-204ENST00000587338 FAM177A1Q8N128 213 aaPredicted RBP9.39□□□□□ -0.91
SDF2-204ENST00000587338 FBXL16Q8N461 479 aa9.39□□□□□ -0.91
SDF2-204ENST00000587338 LEMD2Q8NC56 503 aa9.39□□□□□ -0.91
SDF2-204ENST00000587338 MCPH1Q8NEM0 835 aa9.39□□□□□ -0.91
SDF2-204ENST00000587338 DEPTORQ8TB45 409 aa9.39□□□□□ -0.91
SDF2-204ENST00000587338 SHKBP1Q8TBC3 707 aa9.39□□□□□ -0.91
SDF2-204ENST00000587338 BSNDQ8WZ55 320 aa9.39□□□□□ -0.91
SDF2-204ENST00000587338 E2F7Q96AV8 911 aa9.39□□□□□ -0.91
SDF2-204ENST00000587338 ZFYVE19Q96K21 471 aa9.39□□□□□ -0.91
SDF2-204ENST00000587338 HSD17B14Q9BPX1 270 aa9.39□□□□□ -0.91
SDF2-204ENST00000587338 LARP6Q9BRS8 491 aaKnown RBP9.39□□□□□ -0.91
SDF2-204ENST00000587338 EDEM2Q9BV94 578 aa9.39□□□□□ -0.91
SDF2-204ENST00000587338 VPS45Q9NRW7 570 aa9.39□□□□□ -0.91
SDF2-204ENST00000587338 FOXD4L1Q9NU39 408 aa9.39□□□□□ -0.91
SDF2-204ENST00000587338 GTSE1Q9NYZ3 720 aa9.39□□□□□ -0.91
SDF2-204ENST00000587338 LOC400499M0QZD8 3231 aa9.39□□□□□ -0.91
SDF2-204ENST00000587338 PDCD11Q14690 1871 aaKnown RBP9.38□□□□□ -0.91
SDF2-204ENST00000587338 SMIM28A0A1B0GU29 152 aa9.38□□□□□ -0.91
SDF2-204ENST00000587338 A0A1W2PRU2 124 aa9.38□□□□□ -0.91
SDF2-204ENST00000587338 MYBPHLA2RUH7 354 aa9.38□□□□□ -0.91
SDF2-204ENST00000587338 FAM205CA6NFA0 338 aa9.38□□□□□ -0.91
SDF2-204ENST00000587338 ACKR2O00590 384 aa9.38□□□□□ -0.91
SDF2-204ENST00000587338 DPYSL4O14531 572 aa9.38□□□□□ -0.91
SDF2-204ENST00000587338 CPB1P15086 417 aa9.38□□□□□ -0.91
SDF2-204ENST00000587338 ATP2B1P20020 1258 aa9.38□□□□□ -0.91
SDF2-204ENST00000587338 EPHA5P54756 1037 aa9.38□□□□□ -0.91
SDF2-204ENST00000587338 EVCP57679 992 aa9.38□□□□□ -0.91
SDF2-204ENST00000587338 FCHO2Q0JRZ9 810 aa9.38□□□□□ -0.91
SDF2-204ENST00000587338 STK3Q13188 491 aa9.38□□□□□ -0.91
SDF2-204ENST00000587338 CCINQ13939 588 aa9.38□□□□□ -0.91
SDF2-204ENST00000587338 CALCRLQ16602 461 aa9.38□□□□□ -0.91
SDF2-204ENST00000587338 PLA2G2CQ5R387 149 aa9.38□□□□□ -0.91
SDF2-204ENST00000587338 STXBP5Q5T5C0 1151 aa9.38□□□□□ -0.91
SDF2-204ENST00000587338 TPGS2Q68CL5 300 aa9.38□□□□□ -0.91
SDF2-204ENST00000587338 ZNF280DQ6N043 979 aa9.38□□□□□ -0.91
SDF2-204ENST00000587338 PKN3Q6P5Z2 889 aa9.38□□□□□ -0.91
SDF2-204ENST00000587338 CPLX2Q6PUV4 134 aaKnown RBP9.38□□□□□ -0.91
SDF2-204ENST00000587338 KDF1Q8NAX2 398 aaPredicted RBP9.38□□□□□ -0.91
SDF2-204ENST00000587338 OXER1Q8TDS5 423 aa9.38□□□□□ -0.91
SDF2-204ENST00000587338 KIFC3Q9BVG8 833 aa9.38□□□□□ -0.91
SDF2-204ENST00000587338 ADAM33Q9BZ11 813 aa9.38□□□□□ -0.91
SDF2-204ENST00000587338 GPR88Q9GZN0 384 aa9.38□□□□□ -0.91
SDF2-204ENST00000587338 CCDC113Q9H0I3 377 aa9.38□□□□□ -0.91
SDF2-204ENST00000587338 AFF4Q9UHB7 1163 aaKnown RBP9.38□□□□□ -0.91
SDF2-204ENST00000587338 PCDHA12Q9UN75 941 aa9.38□□□□□ -0.91
SDF2-204ENST00000587338 YIPF1Q9Y548 306 aa9.38□□□□□ -0.91
SDF2-204ENST00000587338 NUB1Q9Y5A7 615 aa9.38□□□□□ -0.91
SDF2-204ENST00000587338 PCDHGA5Q9Y5G8 931 aa9.38□□□□□ -0.91
SDF2-204ENST00000587338 TMEM8BA6NDV4 472 aa9.37□□□□□ -0.91
SDF2-204ENST00000587338 SYN3O14994 580 aa9.37□□□□□ -0.91
SDF2-204ENST00000587338 MCM4P33991 863 aa9.37□□□□□ -0.91
SDF2-204ENST00000587338 YARSP54577 528 aaKnown RBP9.37□□□□□ -0.91
SDF2-204ENST00000587338 OSTNP61366 133 aa9.37□□□□□ -0.91
SDF2-204ENST00000587338 TNK2Q07912 1038 aa9.37□□□□□ -0.91
SDF2-204ENST00000587338 TOB2Q14106 344 aaPredicted RBP9.37□□□□□ -0.91
SDF2-204ENST00000587338 ANKRD1Q15327 319 aa9.37□□□□□ -0.91
SDF2-204ENST00000587338 EARS2Q5JPH6 523 aaKnown RBP9.37□□□□□ -0.91
SDF2-204ENST00000587338 SH3PXD2AQ5TCZ1 1133 aa9.37□□□□□ -0.91
SDF2-204ENST00000587338 ATF7IP2Q5U623 682 aa9.37□□□□□ -0.91
SDF2-204ENST00000587338 RNF19BQ6ZMZ0 732 aa9.37□□□□□ -0.91
SDF2-204ENST00000587338 HAUS6Q7Z4H7 955 aa9.37□□□□□ -0.91
SDF2-204ENST00000587338 APBB1IPQ7Z5R6 666 aaPredicted RBP9.37□□□□□ -0.91
SDF2-204ENST00000587338 ARID3BQ8IVW6 561 aaPredicted RBP9.37□□□□□ -0.91
SDF2-204ENST00000587338 SYNPOQ8N3V7 929 aa9.37□□□□□ -0.91
SDF2-204ENST00000587338 CEP120Q8N960 986 aa9.37□□□□□ -0.91
SDF2-204ENST00000587338 ZCCHC14Q8WYQ9 949 aaKnown RBP9.37□□□□□ -0.91
SDF2-204ENST00000587338 TTC12Q9H892 705 aaPredicted RBP9.37□□□□□ -0.91
SDF2-204ENST00000587338 TOPORSQ9NS56 1045 aaPredicted RBP9.37□□□□□ -0.91
SDF2-204ENST00000587338 GJB4Q9NTQ9 266 aa9.37□□□□□ -0.91
SDF2-204ENST00000587338 SLC38A7Q9NVC3 462 aa9.37□□□□□ -0.91
SDF2-204ENST00000587338 SLC8A2Q9UPR5 921 aa9.37□□□□□ -0.91
SDF2-204ENST00000587338 IGSF10Q6WRI0 2623 aa9.36□□□□□ -0.91
SDF2-204ENST00000587338 SRRM3A6NNA2 597 aaPredicted RBP9.36□□□□□ -0.91
SDF2-204ENST00000587338 C4orf47A7E2U8 309 aa9.36□□□□□ -0.91
SDF2-204ENST00000587338 AKAP3O75969 853 aa9.36□□□□□ -0.91
SDF2-204ENST00000587338 TOP3BO95985 862 aaKnown RBP9.36□□□□□ -0.91
SDF2-204ENST00000587338 XBP1P17861 261 aa9.36□□□□□ -0.91
SDF2-204ENST00000587338 TXKP42681 527 aa9.36□□□□□ -0.91
SDF2-204ENST00000587338 NAMPTP43490 491 aa9.36□□□□□ -0.91
SDF2-204ENST00000587338 CREB5Q02930 508 aa9.36□□□□□ -0.91
SDF2-204ENST00000587338 MRPL58Q14197 206 aaKnown RBP9.36□□□□□ -0.91
SDF2-204ENST00000587338 ELF2Q15723 593 aa9.36□□□□□ -0.91
SDF2-204ENST00000587338 PLK5Q496M5 336 aa9.36□□□□□ -0.91
SDF2-204ENST00000587338 ARHGAP29Q52LW3 1261 aa9.36□□□□□ -0.91
SDF2-204ENST00000587338 DAB2IPQ5VWQ8 1189 aa9.36□□□□□ -0.91
SDF2-204ENST00000587338 LRRC3BQ96PB8 259 aa9.36□□□□□ -0.91
SDF2-204ENST00000587338 PGLYRP2Q96PD5 576 aa9.36□□□□□ -0.91
SDF2-204ENST00000587338 CCDC94Q9BW85 323 aaPredicted RBP9.36□□□□□ -0.91
SDF2-204ENST00000587338 TMEM121BQ9BXQ6 578 aaPredicted RBP9.36□□□□□ -0.91
SDF2-204ENST00000587338 LHX6Q9UPM6 363 aa9.36□□□□□ -0.91
SDF2-204ENST00000587338 LIMCH1Q9UPQ0 1083 aa9.36□□□□□ -0.91
SDF2-204ENST00000587338 TRIP11Q15643 1979 aa9.35□□□□□ -0.91
SDF2-204ENST00000587338 CCDC163A0A0D9SF12 145 aa9.35□□□□□ -0.91
SDF2-204ENST00000587338 ARHGEF35A5YM69 484 aa9.35□□□□□ -0.91
SDF2-204ENST00000587338 SOBPA7XYQ1 873 aa9.35□□□□□ -0.91
SDF2-204ENST00000587338 NEMFO60524 1076 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms