RNA–Protein interactions for RNA: ENST00000586884.1

MBD1-215, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 514 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-215ENST00000586884 MATR3P43243 847 aaKnown RBP eCLIP16.6■□□□□ 0.25
MBD1-215ENST00000586884 SLC12A3P55017 1021 aa16.6■□□□□ 0.25
MBD1-215ENST00000586884 PLD1Q13393 1074 aa16.6■□□□□ 0.25
MBD1-215ENST00000586884 RNF19BQ6ZMZ0 732 aa16.6■□□□□ 0.25
MBD1-215ENST00000586884 MAP4K3Q8IVH8 894 aa16.6■□□□□ 0.25
MBD1-215ENST00000586884 HS6ST3Q8IZP7 471 aa16.6■□□□□ 0.25
MBD1-215ENST00000586884 ZNF687Q8N1G0 1237 aa16.6■□□□□ 0.25
MBD1-215ENST00000586884 GPR161Q8N6U8 529 aaKnown RBP16.6■□□□□ 0.25
MBD1-215ENST00000586884 BEST2Q8NFU1 509 aa16.6■□□□□ 0.25
MBD1-215ENST00000586884 SECISBP2LQ93073 1101 aaKnown RBP16.6■□□□□ 0.25
MBD1-215ENST00000586884 CDK5RAP3Q96JB5 506 aa16.6■□□□□ 0.25
MBD1-215ENST00000586884 GPR88Q9GZN0 384 aa16.6■□□□□ 0.25
MBD1-215ENST00000586884 ZNF334Q9HCZ1 680 aaPredicted RBP16.6■□□□□ 0.25
MBD1-215ENST00000586884 DLL3Q9NYJ7 618 aa16.6■□□□□ 0.25
MBD1-215ENST00000586884 UBQLN1Q9UMX0 589 aaKnown RBP16.6■□□□□ 0.25
MBD1-215ENST00000586884 TRIP11Q15643 1979 aa16.59■□□□□ 0.25
MBD1-215ENST00000586884 TTC26A0AVF1 554 aa16.59■□□□□ 0.25
MBD1-215ENST00000586884 NRG2O14511 850 aaPredicted RBP16.59■□□□□ 0.25
MBD1-215ENST00000586884 XPOTO43592 962 aaKnown RBP16.59■□□□□ 0.25
MBD1-215ENST00000586884 PLA2G4BP0C869 781 aa16.59■□□□□ 0.25
MBD1-215ENST00000586884 GDI1P31150 447 aa16.59■□□□□ 0.25
MBD1-215ENST00000586884 AARSP49588 968 aaKnown RBP eCLIP16.59■□□□□ 0.25
MBD1-215ENST00000586884 NCKAP1LP55160 1127 aa16.59■□□□□ 0.25
MBD1-215ENST00000586884 PPP2R3AQ06190 1150 aa16.59■□□□□ 0.25
MBD1-215ENST00000586884 MTAPQ13126 283 aa16.59■□□□□ 0.25
MBD1-215ENST00000586884 PPP2R5DQ14738 602 aa16.59■□□□□ 0.25
MBD1-215ENST00000586884 ZBTB6Q15916 424 aa16.59■□□□□ 0.25
MBD1-215ENST00000586884 ARL6IP4Q66PJ3 421 aaKnown RBP16.59■□□□□ 0.25
MBD1-215ENST00000586884 MCTP1Q6DN14 999 aa16.59■□□□□ 0.25
MBD1-215ENST00000586884 VITQ6UXI7 678 aa16.59■□□□□ 0.25
MBD1-215ENST00000586884 MAMSTRQ6ZN01 415 aa16.59■□□□□ 0.25
MBD1-215ENST00000586884 ZSCAN18Q8TBC5 510 aaPredicted RBP16.59■□□□□ 0.25
MBD1-215ENST00000586884 E2F7Q96AV8 911 aa16.59■□□□□ 0.25
MBD1-215ENST00000586884 KIF12Q96FN5 646 aa16.59■□□□□ 0.25
MBD1-215ENST00000586884 BICD1Q96G01 975 aa16.59■□□□□ 0.25
MBD1-215ENST00000586884 ZSWIM3Q96MP5 696 aa16.59■□□□□ 0.25
MBD1-215ENST00000586884 TSPAN18Q96SJ8 248 aa16.59■□□□□ 0.25
MBD1-215ENST00000586884 CHRDQ9H2X0 955 aa16.59■□□□□ 0.25
MBD1-215ENST00000586884 ODF2LQ9ULJ1 636 aa16.59■□□□□ 0.25
MBD1-215ENST00000586884 NDRG2Q9UN36 371 aaKnown RBP16.59■□□□□ 0.25
MBD1-215ENST00000586884 SMG5Q9UPR3 1016 aaKnown RBP16.59■□□□□ 0.25
MBD1-215ENST00000586884 YIPF1Q9Y548 306 aa16.59■□□□□ 0.25
MBD1-215ENST00000586884 PIAS3Q9Y6X2 628 aa16.59■□□□□ 0.25
MBD1-215ENST00000586884 CACNA1IQ9P0X4 2223 aa16.59■□□□□ 0.25
MBD1-215ENST00000586884 VWA3AA6NCI4 1184 aa16.58■□□□□ 0.24
MBD1-215ENST00000586884 OR6C75A6NL08 312 aa16.58■□□□□ 0.24
MBD1-215ENST00000586884 SLC26A4O43511 780 aa16.58■□□□□ 0.24
MBD1-215ENST00000586884 MLLT6P55198 1093 aaPredicted RBP16.58■□□□□ 0.24
MBD1-215ENST00000586884 SPAG1Q07617 926 aa16.58■□□□□ 0.24
MBD1-215ENST00000586884 TMEM119Q4V9L6 283 aa16.58■□□□□ 0.24
MBD1-215ENST00000586884 TSSK4Q6SA08 328 aa16.58■□□□□ 0.24
MBD1-215ENST00000586884 HAUS6Q7Z4H7 955 aa16.58■□□□□ 0.24
MBD1-215ENST00000586884 USP37Q86T82 979 aa16.58■□□□□ 0.24
MBD1-215ENST00000586884 MFSD6LQ8IWD5 586 aa16.58■□□□□ 0.24
MBD1-215ENST00000586884 FAM3CQ92520 227 aa16.58■□□□□ 0.24
MBD1-215ENST00000586884 HAPLN2Q9GZV7 340 aa16.58■□□□□ 0.24
MBD1-215ENST00000586884 ZNF263O14978 683 aa16.57■□□□□ 0.24
MBD1-215ENST00000586884 HNRNPDLO14979 420 aaKnown RBP16.57■□□□□ 0.24
MBD1-215ENST00000586884 GJA1P17302 382 aa16.57■□□□□ 0.24
MBD1-215ENST00000586884 SDHBP21912 280 aa16.57■□□□□ 0.24
MBD1-215ENST00000586884 PAX3P23760 479 aa16.57■□□□□ 0.24
MBD1-215ENST00000586884 VIPR2P41587 438 aa16.57■□□□□ 0.24
MBD1-215ENST00000586884 LIG4P49917 911 aa16.57■□□□□ 0.24
MBD1-215ENST00000586884 EPHB3P54753 998 aa16.57■□□□□ 0.24
MBD1-215ENST00000586884 NRLP54845 237 aa16.57■□□□□ 0.24
MBD1-215ENST00000586884 GPR17Q13304 367 aa16.57■□□□□ 0.24
MBD1-215ENST00000586884 TEAD2Q15562 447 aa16.57■□□□□ 0.24
MBD1-215ENST00000586884 C1orf228Q6PIY5 440 aa16.57■□□□□ 0.24
MBD1-215ENST00000586884 SHKBP1Q8TBC3 707 aa16.57■□□□□ 0.24
MBD1-215ENST00000586884 MSANTD3Q96H12 275 aa16.57■□□□□ 0.24
MBD1-215ENST00000586884 AK8Q96MA6 479 aa16.57■□□□□ 0.24
MBD1-215ENST00000586884 PLIN2Q99541 437 aa16.57■□□□□ 0.24
MBD1-215ENST00000586884 SLITRK6Q9H5Y7 841 aa16.57■□□□□ 0.24
MBD1-215ENST00000586884 TIMM13Q9Y5L4 95 aaPredicted RBP16.57■□□□□ 0.24
MBD1-215ENST00000586884 CITO14578 2027 aa16.57■□□□□ 0.24
MBD1-215ENST00000586884 NPHP3-ACAD11A0A0J9YXS1 232 aa16.56■□□□□ 0.24
MBD1-215ENST00000586884 MED19A0JLT2 244 aaPredicted RBP16.56■□□□□ 0.24
MBD1-215ENST00000586884 HEPACAM2A8MVW5 462 aa16.56■□□□□ 0.24
MBD1-215ENST00000586884 FAM189A1O60320 539 aa16.56■□□□□ 0.24
MBD1-215ENST00000586884 VNN2O95498 520 aa16.56■□□□□ 0.24
MBD1-215ENST00000586884 PIGRP01833 764 aa16.56■□□□□ 0.24
MBD1-215ENST00000586884 ADRB2P07550 413 aa16.56■□□□□ 0.24
MBD1-215ENST00000586884 OR4Q2P0C623 313 aa16.56■□□□□ 0.24
MBD1-215ENST00000586884 TDGF1P13385 188 aa16.56■□□□□ 0.24
MBD1-215ENST00000586884 TYMPP19971 482 aa16.56■□□□□ 0.24
MBD1-215ENST00000586884 TNFSF9P41273 254 aa16.56■□□□□ 0.24
MBD1-215ENST00000586884 ALDH1A3P47895 512 aa16.56■□□□□ 0.24
MBD1-215ENST00000586884 CACNB1Q02641 598 aaPredicted RBP16.56■□□□□ 0.24
MBD1-215ENST00000586884 MYBPC2Q14324 1141 aa16.56■□□□□ 0.24
MBD1-215ENST00000586884 RSPO4Q2I0M5 234 aaPredicted RBP16.56■□□□□ 0.24
MBD1-215ENST00000586884 ARSHQ5FYA8 562 aa16.56■□□□□ 0.24
MBD1-215ENST00000586884 DSTYKQ6XUX3 929 aa16.56■□□□□ 0.24
MBD1-215ENST00000586884 TMC8Q8IU68 726 aa16.56■□□□□ 0.24
MBD1-215ENST00000586884 PGLYRP2Q96PD5 576 aa16.56■□□□□ 0.24
MBD1-215ENST00000586884 LRRC3Q9BY71 257 aa16.56■□□□□ 0.24
MBD1-215ENST00000586884 TBX20Q9UMR3 447 aa16.56■□□□□ 0.24
MBD1-215ENST00000586884 DNAH14Q0VDD8 3507 aa16.56■□□□□ 0.24
MBD1-215ENST00000586884 GPR179Q6PRD1 2367 aa16.55■□□□□ 0.24
MBD1-215ENST00000586884 A0A1W2PRU2 124 aa16.55■□□□□ 0.24
MBD1-215ENST00000586884 LACTBL1A8MY62 500 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms