RNA–Protein interactions for RNA: ENST00000586059.5

CNN1-204, Transcript of calponin 1, humanhuman

TSL 3

Gene CNN1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-204ENST00000586059 PCDHB8Q9UN66 801 aa13.01□□□□□ -0.33
CNN1-204ENST00000586059 R3HCC1Q9Y3T6 440 aaKnown RBP13.01□□□□□ -0.33
CNN1-204ENST00000586059 HCFC2Q9Y5Z7 792 aa13.01□□□□□ -0.33
CNN1-204ENST00000586059 LRRIQ3A6PVS8 624 aaPredicted RBP13□□□□□ -0.33
CNN1-204ENST00000586059 H3BQ06 376 aaPredicted RBP13□□□□□ -0.33
CNN1-204ENST00000586059 M0QZQ0 153 aa13□□□□□ -0.33
CNN1-204ENST00000586059 MAPK13O15264 365 aa13□□□□□ -0.33
CNN1-204ENST00000586059 SPTLC1O15269 473 aa13□□□□□ -0.33
CNN1-204ENST00000586059 EPB41P11171 864 aaKnown RBP13□□□□□ -0.33
CNN1-204ENST00000586059 ODC1P11926 461 aa13□□□□□ -0.33
CNN1-204ENST00000586059 KRT13P13646 458 aa13□□□□□ -0.33
CNN1-204ENST00000586059 EPCAMP16422 314 aa13□□□□□ -0.33
CNN1-204ENST00000586059 PSMC2P35998 433 aaKnown RBP13□□□□□ -0.33
CNN1-204ENST00000586059 PNPLA4P41247 253 aa13□□□□□ -0.33
CNN1-204ENST00000586059 STX17P56962 302 aa13□□□□□ -0.33
CNN1-204ENST00000586059 RBP5P82980 135 aa13□□□□□ -0.33
CNN1-204ENST00000586059 TFF2Q03403 129 aa13□□□□□ -0.33
CNN1-204ENST00000586059 PAK1Q13153 545 aa13□□□□□ -0.33
CNN1-204ENST00000586059 VARS2Q5ST30 1063 aaKnown RBP13□□□□□ -0.33
CNN1-204ENST00000586059 ANKS3Q6ZW76 656 aa13□□□□□ -0.33
CNN1-204ENST00000586059 TRAPPC11Q7Z392 1133 aa13□□□□□ -0.33
CNN1-204ENST00000586059 PPFIBP1Q86W92 1011 aa13□□□□□ -0.33
CNN1-204ENST00000586059 APPL2Q8NEU8 664 aa13□□□□□ -0.33
CNN1-204ENST00000586059 VN1R2Q8NFZ6 395 aa13□□□□□ -0.33
CNN1-204ENST00000586059 LNX1Q8TBB1 728 aaPredicted RBP13□□□□□ -0.33
CNN1-204ENST00000586059 PARD3BQ8TEW8 1205 aa13□□□□□ -0.33
CNN1-204ENST00000586059 SENP8Q96LD8 212 aa13□□□□□ -0.33
CNN1-204ENST00000586059 FNIP2Q9P278 1114 aa13□□□□□ -0.33
CNN1-204ENST00000586059 TIMM13Q9Y5L4 95 aaPredicted RBP13□□□□□ -0.33
CNN1-204ENST00000586059 XIRP2A4UGR9 3374 aa12.99□□□□□ -0.33
CNN1-204ENST00000586059 BICDL2A1A5D9 508 aa12.99□□□□□ -0.33
CNN1-204ENST00000586059 ARHGEF37A1IGU5 675 aa12.99□□□□□ -0.33
CNN1-204ENST00000586059 H7C4K7 107 aa12.99□□□□□ -0.33
CNN1-204ENST00000586059 CLSTN1O94985 981 aa12.99□□□□□ -0.33
CNN1-204ENST00000586059 GLUD1P00367 558 aa12.99□□□□□ -0.33
CNN1-204ENST00000586059 TRIM49P0CI25 452 aa12.99□□□□□ -0.33
CNN1-204ENST00000586059 TRIM49CP0CI26 452 aa12.99□□□□□ -0.33
CNN1-204ENST00000586059 PAX3P23760 479 aa12.99□□□□□ -0.33
CNN1-204ENST00000586059 LTBRP36941 435 aa12.99□□□□□ -0.33
CNN1-204ENST00000586059 VAMP7P51809 220 aa12.99□□□□□ -0.33
CNN1-204ENST00000586059 DLG4P78352 724 aa12.99□□□□□ -0.33
CNN1-204ENST00000586059 FKBP3Q00688 224 aaKnown RBP12.99□□□□□ -0.33
CNN1-204ENST00000586059 DLX2Q07687 328 aaPredicted RBP12.99□□□□□ -0.33
CNN1-204ENST00000586059 BIRC3Q13489 604 aa12.99□□□□□ -0.33
CNN1-204ENST00000586059 CLUL1Q15846 466 aa12.99□□□□□ -0.33
CNN1-204ENST00000586059 SCARA3Q6AZY7 606 aa12.99□□□□□ -0.33
CNN1-204ENST00000586059 ZNF280DQ6N043 979 aa12.99□□□□□ -0.33
CNN1-204ENST00000586059 TTI2Q6NXR4 508 aa12.99□□□□□ -0.33
CNN1-204ENST00000586059 INTS8Q75QN2 995 aaKnown RBP12.99□□□□□ -0.33
CNN1-204ENST00000586059 USP37Q86T82 979 aa12.99□□□□□ -0.33
CNN1-204ENST00000586059 PALB2Q86YC2 1186 aa12.99□□□□□ -0.33
CNN1-204ENST00000586059 ZC3H3Q8IXZ2 948 aaKnown RBP12.99□□□□□ -0.33
CNN1-204ENST00000586059 LRRC52Q8N7C0 313 aa12.99□□□□□ -0.33
CNN1-204ENST00000586059 CXorf38Q8TB03 319 aa12.99□□□□□ -0.33
CNN1-204ENST00000586059 TMC2Q8TDI7 906 aa12.99□□□□□ -0.33
CNN1-204ENST00000586059 ZNF516Q92618 1163 aa12.99□□□□□ -0.33
CNN1-204ENST00000586059 CASP10Q92851 521 aa12.99□□□□□ -0.33
CNN1-204ENST00000586059 MKNK1Q9BUB5 465 aa12.99□□□□□ -0.33
CNN1-204ENST00000586059 MTRRQ9UBK8 725 aa12.99□□□□□ -0.33
CNN1-204ENST00000586059 DOCK6Q96HP0 2047 aa12.98□□□□□ -0.33
CNN1-204ENST00000586059 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.98□□□□□ -0.33
CNN1-204ENST00000586059 SPDYE4A6NLX3 237 aa12.98□□□□□ -0.33
CNN1-204ENST00000586059 KPNA7A9QM74 516 aa12.98□□□□□ -0.33
CNN1-204ENST00000586059 CYB561D2O14569 222 aa12.98□□□□□ -0.33
CNN1-204ENST00000586059 SLC16A3O15427 465 aaKnown RBP12.98□□□□□ -0.33
CNN1-204ENST00000586059 ADAM12O43184 909 aa12.98□□□□□ -0.33
CNN1-204ENST00000586059 PHACTR2O75167 634 aa12.98□□□□□ -0.33
CNN1-204ENST00000586059 TYMPP19971 482 aa12.98□□□□□ -0.33
CNN1-204ENST00000586059 CLCN4P51793 760 aa12.98□□□□□ -0.33
CNN1-204ENST00000586059 AP3M2P53677 418 aa12.98□□□□□ -0.33
CNN1-204ENST00000586059 YWHAHQ04917 246 aaPredicted RBP12.98□□□□□ -0.33
CNN1-204ENST00000586059 MYO1EQ12965 1108 aa12.98□□□□□ -0.33
CNN1-204ENST00000586059 TRPC3Q13507 836 aa12.98□□□□□ -0.33
CNN1-204ENST00000586059 KCNC3Q14003 757 aa12.98□□□□□ -0.33
CNN1-204ENST00000586059 CTXN3Q4LDR2 81 aa12.98□□□□□ -0.33
CNN1-204ENST00000586059 CCDC183Q5T5S1 534 aa12.98□□□□□ -0.33
CNN1-204ENST00000586059 TDRD10Q5VZ19 366 aaKnown RBP12.98□□□□□ -0.33
CNN1-204ENST00000586059 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.98□□□□□ -0.33
CNN1-204ENST00000586059 SLC22A17Q8WUG5 538 aa12.98□□□□□ -0.33
CNN1-204ENST00000586059 DUSP9Q99956 384 aaKnown RBP12.98□□□□□ -0.33
CNN1-204ENST00000586059 CLSTN3Q9BQT9 956 aa12.98□□□□□ -0.33
CNN1-204ENST00000586059 MMRN2Q9H8L6 949 aa12.98□□□□□ -0.33
CNN1-204ENST00000586059 CLEC1BQ9P126 229 aa12.98□□□□□ -0.33
CNN1-204ENST00000586059 BACE2Q9Y5Z0 518 aa12.98□□□□□ -0.33
CNN1-204ENST00000586059 CDY1Q9Y6F8 540 aa12.98□□□□□ -0.33
CNN1-204ENST00000586059 TGM5O43548 720 aa12.97□□□□□ -0.33
CNN1-204ENST00000586059 OR1D2P34982 312 aa12.97□□□□□ -0.33
CNN1-204ENST00000586059 ARPP19P56211 112 aa12.97□□□□□ -0.33
CNN1-204ENST00000586059 NLRP12P59046 1061 aa12.97□□□□□ -0.33
CNN1-204ENST00000586059 CLDN10P78369 228 aa12.97□□□□□ -0.33
CNN1-204ENST00000586059 MRPL58Q14197 206 aaKnown RBP12.97□□□□□ -0.33
CNN1-204ENST00000586059 AAK1Q2M2I8 961 aa12.97□□□□□ -0.33
CNN1-204ENST00000586059 DPCR1Q3MIW9 517 aa12.97□□□□□ -0.33
CNN1-204ENST00000586059 CCDC40Q4G0X9 1142 aa12.97□□□□□ -0.33
CNN1-204ENST00000586059 C1orf220Q5T0J3 134 aa12.97□□□□□ -0.33
CNN1-204ENST00000586059 OVOS1Q6IE37 1185 aa12.97□□□□□ -0.33
CNN1-204ENST00000586059 ANKRD54Q6NXT1 300 aa12.97□□□□□ -0.33
CNN1-204ENST00000586059 RSPO2Q6UXX9 243 aaPredicted RBP12.97□□□□□ -0.33
CNN1-204ENST00000586059 MLKLQ8NB16 471 aa12.97□□□□□ -0.33
CNN1-204ENST00000586059 HPDLQ96IR7 371 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms