RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 MCM7P33993 719 aa11.2□□□□□ -0.62
GGA3-219ENST00000584550 MPLP40238 635 aa11.2□□□□□ -0.62
GGA3-219ENST00000584550 RAP1GAPP47736 663 aa11.2□□□□□ -0.62
GGA3-219ENST00000584550 ZNF252P-AS1Q0IIN9 211 aa11.2□□□□□ -0.62
GGA3-219ENST00000584550 TWF1Q12792 350 aa11.2□□□□□ -0.62
GGA3-219ENST00000584550 CUL4AQ13619 759 aa11.2□□□□□ -0.62
GGA3-219ENST00000584550 ZNF174Q15697 407 aa11.2□□□□□ -0.62
GGA3-219ENST00000584550 UPP1Q16831 310 aa11.2□□□□□ -0.62
GGA3-219ENST00000584550 DGKKQ5KSL6 1271 aa11.2□□□□□ -0.62
GGA3-219ENST00000584550 PLA2G2CQ5R387 149 aa11.2□□□□□ -0.62
GGA3-219ENST00000584550 IQCEQ6IPM2 695 aa11.2□□□□□ -0.62
GGA3-219ENST00000584550 PKN3Q6P5Z2 889 aa11.2□□□□□ -0.62
GGA3-219ENST00000584550 HSCBQ8IWL3 235 aa11.2□□□□□ -0.62
GGA3-219ENST00000584550 TCEAL8Q8IYN2 117 aa11.2□□□□□ -0.62
GGA3-219ENST00000584550 ELMOD1Q8N336 334 aa11.2□□□□□ -0.62
GGA3-219ENST00000584550 PIGOQ8TEQ8 1089 aa11.2□□□□□ -0.62
GGA3-219ENST00000584550 LOXL4Q96JB6 756 aa11.2□□□□□ -0.62
GGA3-219ENST00000584550 NFKBIZQ9BYH8 718 aa11.2□□□□□ -0.62
GGA3-219ENST00000584550 ADAM33Q9BZ11 813 aa11.2□□□□□ -0.62
GGA3-219ENST00000584550 PRMT7Q9NVM4 692 aaPredicted RBP11.2□□□□□ -0.62
GGA3-219ENST00000584550 POLR3BQ9NW08 1133 aaPredicted RBP11.2□□□□□ -0.62
GGA3-219ENST00000584550 CEP72Q9P209 647 aa11.2□□□□□ -0.62
GGA3-219ENST00000584550 LHX6Q9UPM6 363 aa11.2□□□□□ -0.62
GGA3-219ENST00000584550 DMXL2Q8TDJ6 3036 aa11.19□□□□□ -0.62
GGA3-219ENST00000584550 TRIP11Q15643 1979 aa11.19□□□□□ -0.62
GGA3-219ENST00000584550 KIF26AQ9ULI4 1882 aaPredicted RBP11.19□□□□□ -0.62
GGA3-219ENST00000584550 SPAG17Q6Q759 2223 aa11.19□□□□□ -0.62
GGA3-219ENST00000584550 N4BP3O15049 544 aa11.19□□□□□ -0.62
GGA3-219ENST00000584550 NEMFO60524 1076 aa11.19□□□□□ -0.62
GGA3-219ENST00000584550 USO1O60763 962 aaKnown RBP11.19□□□□□ -0.62
GGA3-219ENST00000584550 CTHP32929 405 aa11.19□□□□□ -0.62
GGA3-219ENST00000584550 TXKP42681 527 aa11.19□□□□□ -0.62
GGA3-219ENST00000584550 PRPF4BQ13523 1007 aaKnown RBP11.19□□□□□ -0.62
GGA3-219ENST00000584550 NBR1Q14596 966 aa11.19□□□□□ -0.62
GGA3-219ENST00000584550 CALCRLQ16602 461 aa11.19□□□□□ -0.62
GGA3-219ENST00000584550 SH3PXD2AQ5TCZ1 1133 aa11.19□□□□□ -0.62
GGA3-219ENST00000584550 EEF1DP3Q658K8 133 aa11.19□□□□□ -0.62
GGA3-219ENST00000584550 SLC8B1Q6J4K2 584 aa11.19□□□□□ -0.62
GGA3-219ENST00000584550 EIF2AK1Q9BQI3 630 aaKnown RBP11.19□□□□□ -0.62
GGA3-219ENST00000584550 SCNM1Q9BWG6 230 aa11.19□□□□□ -0.62
GGA3-219ENST00000584550 TMEM121BQ9BXQ6 578 aaPredicted RBP11.19□□□□□ -0.62
GGA3-219ENST00000584550 FZD8Q9H461 694 aa11.19□□□□□ -0.62
GGA3-219ENST00000584550 C8orf33Q9H7E9 229 aaPredicted RBP11.19□□□□□ -0.62
GGA3-219ENST00000584550 ASAH2Q9NR71 780 aa11.19□□□□□ -0.62
GGA3-219ENST00000584550 NOL7Q9UMY1 257 aaKnown RBP11.19□□□□□ -0.62
GGA3-219ENST00000584550 ATG2BQ96BY7 2078 aa11.18□□□□□ -0.62
GGA3-219ENST00000584550 LAMA5O15230 3695 aa11.18□□□□□ -0.62
GGA3-219ENST00000584550 A0A1W2PRU2 124 aa11.18□□□□□ -0.62
GGA3-219ENST00000584550 MYBPHLA2RUH7 354 aa11.18□□□□□ -0.62
GGA3-219ENST00000584550 VPS37CA5D8V6 355 aaPredicted RBP11.18□□□□□ -0.62
GGA3-219ENST00000584550 SOBPA7XYQ1 873 aa11.18□□□□□ -0.62
GGA3-219ENST00000584550 TMEM189-UBE2V1I3L0A0 370 aa11.18□□□□□ -0.62
GGA3-219ENST00000584550 CHADO15335 359 aa11.18□□□□□ -0.62
GGA3-219ENST00000584550 EDN1P05305 212 aa11.18□□□□□ -0.62
GGA3-219ENST00000584550 HSP90AA1P07900 732 aaKnown RBP11.18□□□□□ -0.62
GGA3-219ENST00000584550 U2AF2P26368 475 aaKnown RBP eCLIP11.18□□□□□ -0.62
GGA3-219ENST00000584550 HOXA6P31267 233 aa11.18□□□□□ -0.62
GGA3-219ENST00000584550 RARRES1P49788 294 aa11.18□□□□□ -0.62
GGA3-219ENST00000584550 MLLT6P55198 1093 aaPredicted RBP11.18□□□□□ -0.62
GGA3-219ENST00000584550 CREB5Q02930 508 aa11.18□□□□□ -0.62
GGA3-219ENST00000584550 TNK2Q07912 1038 aa11.18□□□□□ -0.62
GGA3-219ENST00000584550 CCINQ13939 588 aa11.18□□□□□ -0.62
GGA3-219ENST00000584550 TTC38Q5R3I4 469 aa11.18□□□□□ -0.62
GGA3-219ENST00000584550 STXBP5Q5T5C0 1151 aa11.18□□□□□ -0.62
GGA3-219ENST00000584550 KIAA1211LQ6NV74 962 aa11.18□□□□□ -0.62
GGA3-219ENST00000584550 PPP4R3CPQ6ZMV5 832 aa11.18□□□□□ -0.62
GGA3-219ENST00000584550 RALGPS2Q86X27 583 aaPredicted RBP11.18□□□□□ -0.62
GGA3-219ENST00000584550 ZBTB8OSQ8IWT0 167 aa11.18□□□□□ -0.62
GGA3-219ENST00000584550 SLFN12Q8IYM2 578 aa11.18□□□□□ -0.62
GGA3-219ENST00000584550 SPRYD3Q8NCJ5 442 aa11.18□□□□□ -0.62
GGA3-219ENST00000584550 SHKBP1Q8TBC3 707 aa11.18□□□□□ -0.62
GGA3-219ENST00000584550 ZCCHC14Q8WYQ9 949 aaKnown RBP11.18□□□□□ -0.62
GGA3-219ENST00000584550 SNX21Q969T3 373 aa11.18□□□□□ -0.62
GGA3-219ENST00000584550 COL26A1Q96A83 441 aa11.18□□□□□ -0.62
GGA3-219ENST00000584550 PRIMPOLQ96LW4 560 aa11.18□□□□□ -0.62
GGA3-219ENST00000584550 LRRC3BQ96PB8 259 aa11.18□□□□□ -0.62
GGA3-219ENST00000584550 PPP1R10Q96QC0 940 aaKnown RBP11.18□□□□□ -0.62
GGA3-219ENST00000584550 ADPGKQ9BRR6 497 aa11.18□□□□□ -0.62
GGA3-219ENST00000584550 EDEM2Q9BV94 578 aa11.18□□□□□ -0.62
GGA3-219ENST00000584550 TMEM60Q9H2L4 133 aa11.18□□□□□ -0.62
GGA3-219ENST00000584550 TRPV4Q9HBA0 871 aa11.18□□□□□ -0.62
GGA3-219ENST00000584550 VPS45Q9NRW7 570 aa11.18□□□□□ -0.62
GGA3-219ENST00000584550 FBXL5Q9UKA1 691 aa11.18□□□□□ -0.62
GGA3-219ENST00000584550 WASF3Q9UPY6 502 aa11.18□□□□□ -0.62
GGA3-219ENST00000584550 EML5Q05BV3 1969 aa11.17□□□□□ -0.62
GGA3-219ENST00000584550 DCLK1O15075 740 aa11.17□□□□□ -0.62
GGA3-219ENST00000584550 SOX4Q06945 474 aaPredicted RBP11.17□□□□□ -0.62
GGA3-219ENST00000584550 CTXN3Q4LDR2 81 aa11.17□□□□□ -0.62
GGA3-219ENST00000584550 C1orf228Q6PIY5 440 aa11.17□□□□□ -0.62
GGA3-219ENST00000584550 ARID3BQ8IVW6 561 aaPredicted RBP11.17□□□□□ -0.62
GGA3-219ENST00000584550 GATA6Q92908 595 aa11.17□□□□□ -0.62
GGA3-219ENST00000584550 MSANTD3Q96H12 275 aa11.17□□□□□ -0.62
GGA3-219ENST00000584550 HSD17B14Q9BPX1 270 aa11.17□□□□□ -0.62
GGA3-219ENST00000584550 TTC12Q9H892 705 aaPredicted RBP11.17□□□□□ -0.62
GGA3-219ENST00000584550 POLD4Q9HCU8 107 aa11.17□□□□□ -0.62
GGA3-219ENST00000584550 ANKEF1Q9NU02 776 aa11.17□□□□□ -0.62
GGA3-219ENST00000584550 PCDHA12Q9UN75 941 aa11.17□□□□□ -0.62
GGA3-219ENST00000584550 SLC8A2Q9UPR5 921 aa11.17□□□□□ -0.62
GGA3-219ENST00000584550 PCDHGA5Q9Y5G8 931 aa11.17□□□□□ -0.62
GGA3-219ENST00000584550 SMIM28A0A1B0GU29 152 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms