RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 DNAJC7Q99615 494 aa13.67□□□□□ -0.22
RNF43-208ENST00000584437 LBHD1Q9BQE6 289 aaPredicted RBP13.67□□□□□ -0.22
RNF43-208ENST00000584437 NDFIP2Q9NV92 336 aa13.67□□□□□ -0.22
RNF43-208ENST00000584437 HOXC10Q9NYD6 342 aa13.67□□□□□ -0.22
RNF43-208ENST00000584437 PCDHB2Q9Y5E7 798 aa13.67□□□□□ -0.22
RNF43-208ENST00000584437 PCDHA10Q9Y5I2 948 aa13.67□□□□□ -0.22
RNF43-208ENST00000584437 CCDC78A2IDD5 438 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 GHRP10912 638 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 TARSP26639 723 aaKnown RBP13.66□□□□□ -0.22
RNF43-208ENST00000584437 CRKP46108 304 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 MAPK7Q13164 816 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 STX5Q13190 355 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 RNF219Q5W0B1 726 aaPredicted RBP13.66□□□□□ -0.22
RNF43-208ENST00000584437 FAM196AQ6ZSG2 479 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 MIGA2Q7L4E1 593 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 SH3TC2Q8TF17 1288 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 PIGBQ92521 554 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 HPS3Q969F9 1004 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 MAML3Q96JK9 1138 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 MYMKA6NI61 221 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 GOLGA8TH3BQL2 631 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 EIF3DO15371 548 aaKnown RBP eCLIP13.66□□□□□ -0.22
RNF43-208ENST00000584437 ALBP02768 609 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 TPI1P60174 286 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 PAPD7Q5XG87 772 aaKnown RBP13.66□□□□□ -0.22
RNF43-208ENST00000584437 CAAP1Q9H8G2 361 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 KIF1BO60333 1816 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 TRPC5OSA6NMA1 111 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 F5H6K3 240 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 APOA4P06727 396 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 POLBP06746 335 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 KLRC3Q07444 240 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 CHI3L2Q15782 390 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 NLRP9Q7RTR0 991 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 GPR141Q7Z602 305 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 MICU2Q8IYU8 434 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 PPP1R36Q96LQ0 422 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 KLHL11Q9NVR0 708 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 ARHGEF38Q9NXL2 777 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 CFAP74Q9C0B2 1584 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 PDGFRAP16234 1089 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 BTKQ06187 659 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 ZNF235Q14590 738 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 KLHDC7AQ5VTJ3 777 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 TAS2R42Q7RTR8 314 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 SCN4BQ8IWT1 228 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 CALML6Q8TD86 181 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 CPA5Q8WXQ8 436 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 INPP5DQ92835 1189 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 ZNF335Q9H4Z2 1342 aaPredicted RBP13.66□□□□□ -0.22
RNF43-208ENST00000584437 PPP1R3GB7ZBB8 358 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 ADORA2BP29275 332 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 PLOD1Q02809 727 aaPredicted RBP13.66□□□□□ -0.22
RNF43-208ENST00000584437 PTPRN2Q92932 1015 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 ADAM33Q9BZ11 813 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 KDM6BO15054 1643 aa13.66□□□□□ -0.22
RNF43-208ENST00000584437 ZFYVE16Q7Z3T8 1539 aa13.65□□□□□ -0.22
RNF43-208ENST00000584437 PRR23D1E9PI22 279 aaPredicted RBP13.65□□□□□ -0.22
RNF43-208ENST00000584437 PRR23D2P0DMB1 279 aaPredicted RBP13.65□□□□□ -0.22
RNF43-208ENST00000584437 ATP6V1B1P15313 513 aa13.65□□□□□ -0.22
RNF43-208ENST00000584437 SLC13A5Q86YT5 568 aaPredicted RBP13.65□□□□□ -0.22
RNF43-208ENST00000584437 TPCN2Q8NHX9 752 aa13.65□□□□□ -0.22
RNF43-208ENST00000584437 CNDP1Q96KN2 507 aa13.65□□□□□ -0.22
RNF43-208ENST00000584437 REEP2Q9BRK0 252 aa13.65□□□□□ -0.22
RNF43-208ENST00000584437 PRR36Q9H6K5 1346 aa13.65□□□□□ -0.22
RNF43-208ENST00000584437 ZNF609O15014 1411 aa13.65□□□□□ -0.22
RNF43-208ENST00000584437 CAND2O75155 1236 aa13.65□□□□□ -0.22
RNF43-208ENST00000584437 HLFQ16534 295 aa13.65□□□□□ -0.22
RNF43-208ENST00000584437 ARID3BQ8IVW6 561 aaPredicted RBP13.65□□□□□ -0.22
RNF43-208ENST00000584437 PLEKHA5Q9HAU0 1116 aa13.65□□□□□ -0.22
RNF43-208ENST00000584437 RHBDL2Q9NX52 303 aa13.65□□□□□ -0.22
RNF43-208ENST00000584437 STMN3Q9NZ72 180 aa13.65□□□□□ -0.22
RNF43-208ENST00000584437 TLR2O60603 784 aa13.65□□□□□ -0.22
RNF43-208ENST00000584437 SLC9A1P19634 815 aa13.65□□□□□ -0.22
RNF43-208ENST00000584437 PDAP1Q13442 181 aaKnown RBP13.65□□□□□ -0.22
RNF43-208ENST00000584437 RABL6Q3YEC7 729 aaPredicted RBP13.65□□□□□ -0.22
RNF43-208ENST00000584437 TRAF7Q6Q0C0 670 aa13.65□□□□□ -0.22
RNF43-208ENST00000584437 IFNEQ86WN2 208 aa13.65□□□□□ -0.22
RNF43-208ENST00000584437 P3H2Q8IVL5 708 aa13.65□□□□□ -0.22
RNF43-208ENST00000584437 ASIC4Q96FT7 647 aa13.65□□□□□ -0.22
RNF43-208ENST00000584437 FRMD8P1Q9BZ68 369 aaPredicted RBP13.65□□□□□ -0.22
RNF43-208ENST00000584437 RAVER2Q9HCJ3 691 aaKnown RBP13.65□□□□□ -0.22
RNF43-208ENST00000584437 RNF146Q9NTX7 359 aa13.65□□□□□ -0.22
RNF43-208ENST00000584437 SYBUQ9NX95 663 aa13.65□□□□□ -0.22
RNF43-208ENST00000584437 FAM95CA0A1B0GW59 222 aa13.65□□□□□ -0.22
RNF43-208ENST00000584437 RARGP13631 454 aa13.65□□□□□ -0.22
RNF43-208ENST00000584437 RBBP8NLQ8NC74 664 aaPredicted RBP13.65□□□□□ -0.22
RNF43-208ENST00000584437 ARHGEF1Q92888 912 aaKnown RBP13.65□□□□□ -0.22
RNF43-208ENST00000584437 TUBGCP3Q96CW5 907 aa13.65□□□□□ -0.22
RNF43-208ENST00000584437 RBBP8Q99708 897 aa13.65□□□□□ -0.22
RNF43-208ENST00000584437 ISCA1Q9BUE6 129 aa13.65□□□□□ -0.22
RNF43-208ENST00000584437 CD209Q9NNX6 404 aa13.65□□□□□ -0.22
RNF43-208ENST00000584437 YWHABP31946 246 aaKnown RBP13.64□□□□□ -0.23
RNF43-208ENST00000584437 CAVIN3Q969G5 261 aa13.64□□□□□ -0.23
RNF43-208ENST00000584437 ZBTB10Q96DT7 871 aa13.64□□□□□ -0.23
RNF43-208ENST00000584437 GIMAP4Q9NUV9 329 aa13.64□□□□□ -0.23
RNF43-208ENST00000584437 RIC8BQ9NVN3 520 aa13.64□□□□□ -0.23
RNF43-208ENST00000584437 HEY2Q9UBP5 337 aa13.64□□□□□ -0.23
RNF43-208ENST00000584437 SHROOM2Q13796 1616 aa13.64□□□□□ -0.23
RNF43-208ENST00000584437 ROBO2Q9HCK4 1378 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms