RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 M0R296 226 aa22.11■■□□□ 1.13
SS18-224ENST00000584083 PRRG1O14668 218 aa22.11■■□□□ 1.13
SS18-224ENST00000584083 EIF3DO15371 548 aaKnown RBP eCLIP22.11■■□□□ 1.13
SS18-224ENST00000584083 EXTL3O43909 919 aa22.11■■□□□ 1.13
SS18-224ENST00000584083 PFKFB1P16118 471 aa22.11■■□□□ 1.13
SS18-224ENST00000584083 AARSP49588 968 aaKnown RBP eCLIP22.11■■□□□ 1.13
SS18-224ENST00000584083 LILRA4P59901 499 aa22.11■■□□□ 1.13
SS18-224ENST00000584083 CUL4BQ13620 913 aa22.11■■□□□ 1.13
SS18-224ENST00000584083 RTL10Q7L3V2 364 aa22.11■■□□□ 1.13
SS18-224ENST00000584083 GET4Q7L5D6 327 aaPredicted RBP22.11■■□□□ 1.13
SS18-224ENST00000584083 BRSK2Q8IWQ3 736 aa22.11■■□□□ 1.13
SS18-224ENST00000584083 SCAND2PQ9GZW5 306 aaPredicted RBP22.11■■□□□ 1.13
SS18-224ENST00000584083 DOCK8Q8NF50 2099 aa22.11■■□□□ 1.13
SS18-224ENST00000584083 ANO9A1A5B4 782 aa22.1■■□□□ 1.13
SS18-224ENST00000584083 PIRO00625 290 aa22.1■■□□□ 1.13
SS18-224ENST00000584083 ABLIM3O94929 683 aa22.1■■□□□ 1.13
SS18-224ENST00000584083 CPB1P15086 417 aa22.1■■□□□ 1.13
SS18-224ENST00000584083 PAX3P23760 479 aa22.1■■□□□ 1.13
SS18-224ENST00000584083 TFAMQ00059 246 aaKnown RBP22.1■■□□□ 1.13
SS18-224ENST00000584083 MTMR3Q13615 1198 aa22.1■■□□□ 1.13
SS18-224ENST00000584083 NT5DC4Q86YG4 428 aa22.1■■□□□ 1.13
SS18-224ENST00000584083 EFCAB13Q8IY85 973 aa22.1■■□□□ 1.13
SS18-224ENST00000584083 ZNF507Q8TCN5 953 aa22.1■■□□□ 1.13
SS18-224ENST00000584083 SENP8Q96LD8 212 aa22.1■■□□□ 1.13
SS18-224ENST00000584083 MYADMQ96S97 322 aa22.1■■□□□ 1.13
SS18-224ENST00000584083 CYP4F11Q9HBI6 524 aa22.1■■□□□ 1.13
SS18-224ENST00000584083 PVALEFA0A1B0GWK0 134 aa22.09■■□□□ 1.13
SS18-224ENST00000584083 KIAA0391O15091 583 aaKnown RBP22.09■■□□□ 1.13
SS18-224ENST00000584083 ACTN4O43707 911 aaKnown RBP22.09■■□□□ 1.13
SS18-224ENST00000584083 N4BP1O75113 896 aaKnown RBP22.09■■□□□ 1.13
SS18-224ENST00000584083 OAZ2O95190 189 aa22.09■■□□□ 1.13
SS18-224ENST00000584083 ODC1P11926 461 aa22.09■■□□□ 1.13
SS18-224ENST00000584083 ATF2P15336 505 aa22.09■■□□□ 1.13
SS18-224ENST00000584083 FSHRP23945 695 aa22.09■■□□□ 1.13
SS18-224ENST00000584083 HOXD13P35453 343 aa22.09■■□□□ 1.13
SS18-224ENST00000584083 NTHL1P78549 312 aa22.09■■□□□ 1.13
SS18-224ENST00000584083 SIGLEC14Q08ET2 396 aa22.09■■□□□ 1.13
SS18-224ENST00000584083 TPGS2Q68CL5 300 aa22.09■■□□□ 1.13
SS18-224ENST00000584083 HFE2Q6ZVN8 426 aa22.09■■□□□ 1.13
SS18-224ENST00000584083 EPM2AIP1Q7L775 607 aaPredicted RBP22.09■■□□□ 1.13
SS18-224ENST00000584083 UBALD2Q8IYN6 164 aa22.09■■□□□ 1.13
SS18-224ENST00000584083 GPD1LQ8N335 351 aa22.09■■□□□ 1.13
SS18-224ENST00000584083 PAGE5Q96GU1 130 aa22.09■■□□□ 1.13
SS18-224ENST00000584083 SLC39A2Q9NP94 309 aa22.09■■□□□ 1.13
SS18-224ENST00000584083 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.09■■□□□ 1.13
SS18-224ENST00000584083 USP25Q9UHP3 1055 aa22.09■■□□□ 1.13
SS18-224ENST00000584083 ARHGEF37A1IGU5 675 aa22.08■■□□□ 1.13
SS18-224ENST00000584083 SPTLC1O15269 473 aa22.08■■□□□ 1.13
SS18-224ENST00000584083 LRG1P02750 347 aa22.08■■□□□ 1.13
SS18-224ENST00000584083 WNT7BP56706 349 aa22.08■■□□□ 1.13
SS18-224ENST00000584083 OVOS1Q6IE37 1185 aa22.08■■□□□ 1.13
SS18-224ENST00000584083 NELFCDQ8IXH7 590 aa22.08■■□□□ 1.13
SS18-224ENST00000584083 CACTINQ8WUQ7 758 aaKnown RBP22.08■■□□□ 1.13
SS18-224ENST00000584083 PBXIP1Q96AQ6 731 aa22.08■■□□□ 1.13
SS18-224ENST00000584083 OXCT2Q9BYC2 517 aaPredicted RBP22.08■■□□□ 1.13
SS18-224ENST00000584083 HCN4Q9Y3Q4 1203 aa22.08■■□□□ 1.13
SS18-224ENST00000584083 UBE4BO95155 1302 aa22.07■■□□□ 1.12
SS18-224ENST00000584083 ZNF233A6NK53 670 aa22.07■■□□□ 1.12
SS18-224ENST00000584083 SEC24AO95486 1093 aa22.07■■□□□ 1.12
SS18-224ENST00000584083 TYMPP19971 482 aa22.07■■□□□ 1.12
SS18-224ENST00000584083 SYKP43405 635 aa22.07■■□□□ 1.12
SS18-224ENST00000584083 TAF6P49848 677 aa22.07■■□□□ 1.12
SS18-224ENST00000584083 EHHADHQ08426 723 aa22.07■■□□□ 1.12
SS18-224ENST00000584083 ADCY1Q08828 1119 aa22.07■■□□□ 1.12
SS18-224ENST00000584083 TCEAL8Q8IYN2 117 aa22.07■■□□□ 1.12
SS18-224ENST00000584083 SCFD1Q8WVM8 642 aa22.07■■□□□ 1.12
SS18-224ENST00000584083 SMOC2Q9H3U7 446 aa22.07■■□□□ 1.12
SS18-224ENST00000584083 KCNK12Q9HB15 430 aa22.07■■□□□ 1.12
SS18-224ENST00000584083 PDE11AQ9HCR9 933 aa22.07■■□□□ 1.12
SS18-224ENST00000584083 HCFC1R1Q9NWW0 138 aa22.07■■□□□ 1.12
SS18-224ENST00000584083 HSPBP1Q9NZL4 362 aa22.07■■□□□ 1.12
SS18-224ENST00000584083 AFF4Q9UHB7 1163 aaKnown RBP22.07■■□□□ 1.12
SS18-224ENST00000584083 HPSEQ9Y251 543 aa22.07■■□□□ 1.12
SS18-224ENST00000584083 OR6C75A6NL08 312 aa22.06■■□□□ 1.12
SS18-224ENST00000584083 CYB561D2O14569 222 aa22.06■■□□□ 1.12
SS18-224ENST00000584083 POU2F2P09086 479 aa22.06■■□□□ 1.12
SS18-224ENST00000584083 NDUFA8P51970 172 aa22.06■■□□□ 1.12
SS18-224ENST00000584083 TDGQ13569 410 aa22.06■■□□□ 1.12
SS18-224ENST00000584083 SV2CQ496J9 727 aa22.06■■□□□ 1.12
SS18-224ENST00000584083 RNF19BQ6ZMZ0 732 aa22.06■■□□□ 1.12
SS18-224ENST00000584083 HS2ST1Q7LGA3 356 aa22.06■■□□□ 1.12
SS18-224ENST00000584083 METTL23Q86XA0 190 aa22.06■■□□□ 1.12
SS18-224ENST00000584083 FSIP1Q8NA03 581 aa22.06■■□□□ 1.12
SS18-224ENST00000584083 MFSD14AQ96MC6 490 aa22.06■■□□□ 1.12
SS18-224ENST00000584083 GDPD2Q9HCC8 539 aa22.06■■□□□ 1.12
SS18-224ENST00000584083 KIAA1586Q9HCI6 787 aa22.06■■□□□ 1.12
SS18-224ENST00000584083 EXOC1Q9NV70 894 aa22.06■■□□□ 1.12
SS18-224ENST00000584083 IGSF9Q9P2J2 1179 aa22.06■■□□□ 1.12
SS18-224ENST00000584083 EPS15L1Q9UBC2 864 aa22.06■■□□□ 1.12
SS18-224ENST00000584083 DNMT3BQ9UBC3 853 aaKnown RBP22.06■■□□□ 1.12
SS18-224ENST00000584083 NOTCH4Q99466 2003 aa22.06■■□□□ 1.12
SS18-224ENST00000584083 TGFB1I1O43294 461 aa22.05■■□□□ 1.12
SS18-224ENST00000584083 ITGB3P05106 788 aa22.05■■□□□ 1.12
SS18-224ENST00000584083 OR4Q2P0C623 313 aa22.05■■□□□ 1.12
SS18-224ENST00000584083 LAMP2P13473 410 aa22.05■■□□□ 1.12
SS18-224ENST00000584083 NUCB2P80303 420 aa22.05■■□□□ 1.12
SS18-224ENST00000584083 PABPC1LQ4VXU2 614 aaKnown RBP22.05■■□□□ 1.12
SS18-224ENST00000584083 BMP8AQ7Z5Y6 402 aa22.05■■□□□ 1.12
SS18-224ENST00000584083 CBWD2Q8IUF1 395 aa22.05■■□□□ 1.12
SS18-224ENST00000584083 ZNF560Q96MR9 790 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms