RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 FAM177A1Q8N128 213 aaPredicted RBP12.6□□□□□ -0.39
NUP85-224ENST00000583948 DAGLBQ8NCG7 672 aa12.6□□□□□ -0.39
NUP85-224ENST00000583948 C3orf58Q8NDZ4 430 aa12.6□□□□□ -0.39
NUP85-224ENST00000583948 CNNM3Q8NE01 707 aa12.6□□□□□ -0.39
NUP85-224ENST00000583948 ZSCAN18Q8TBC5 510 aaPredicted RBP12.6□□□□□ -0.39
NUP85-224ENST00000583948 BICD2Q8TD16 824 aa12.6□□□□□ -0.39
NUP85-224ENST00000583948 DDX27Q96GQ7 796 aaKnown RBP12.6□□□□□ -0.39
NUP85-224ENST00000583948 DUSP15Q9H1R2 295 aaPredicted RBP12.6□□□□□ -0.39
NUP85-224ENST00000583948 DHX33Q9H6R0 707 aaKnown RBP12.6□□□□□ -0.39
NUP85-224ENST00000583948 XPNPEP1Q9NQW7 623 aa12.6□□□□□ -0.39
NUP85-224ENST00000583948 RGL1Q9NZL6 768 aa12.6□□□□□ -0.39
NUP85-224ENST00000583948 CEP72Q9P209 647 aa12.6□□□□□ -0.39
NUP85-224ENST00000583948 MTRRQ9UBK8 725 aa12.6□□□□□ -0.39
NUP85-224ENST00000583948 RCOR1Q9UKL0 485 aa12.6□□□□□ -0.39
NUP85-224ENST00000583948 MAST4O15021 2626 aa12.59□□□□□ -0.39
NUP85-224ENST00000583948 CCDC194A0A1B0GVG4 234 aa12.59□□□□□ -0.39
NUP85-224ENST00000583948 LNP1A1A4G5 178 aa12.59□□□□□ -0.39
NUP85-224ENST00000583948 ANTXRLA6NF34 631 aa12.59□□□□□ -0.39
NUP85-224ENST00000583948 SPECC1L-ADORA2AF8WAN1 911 aa12.59□□□□□ -0.39
NUP85-224ENST00000583948 SPTLC2O15270 562 aa12.59□□□□□ -0.39
NUP85-224ENST00000583948 PRB1P04280 392 aa12.59□□□□□ -0.39
NUP85-224ENST00000583948 GNA11P29992 359 aa12.59□□□□□ -0.39
NUP85-224ENST00000583948 NASPP49321 788 aaPredicted RBP12.59□□□□□ -0.39
NUP85-224ENST00000583948 PTENP60484 403 aa12.59□□□□□ -0.39
NUP85-224ENST00000583948 PSMC5P62195 406 aa12.59□□□□□ -0.39
NUP85-224ENST00000583948 ROR1Q01973 937 aa12.59□□□□□ -0.39
NUP85-224ENST00000583948 CAPSQ13938 189 aa12.59□□□□□ -0.39
NUP85-224ENST00000583948 PLK5Q496M5 336 aa12.59□□□□□ -0.39
NUP85-224ENST00000583948 RILPL1Q5EBL4 403 aa12.59□□□□□ -0.39
NUP85-224ENST00000583948 EARS2Q5JPH6 523 aaKnown RBP12.59□□□□□ -0.39
NUP85-224ENST00000583948 PDZD3Q86UT5 571 aa12.59□□□□□ -0.39
NUP85-224ENST00000583948 TBCKQ8TEA7 893 aa12.59□□□□□ -0.39
NUP85-224ENST00000583948 SMARCD2Q92925 531 aa12.59□□□□□ -0.39
NUP85-224ENST00000583948 TNFRSF25Q93038 417 aa12.59□□□□□ -0.39
NUP85-224ENST00000583948 HHIPQ96QV1 700 aa12.59□□□□□ -0.39
NUP85-224ENST00000583948 TENM4Q6N022 2769 aa12.59□□□□□ -0.39
NUP85-224ENST00000583948 NUP205Q92621 2012 aa12.59□□□□□ -0.39
NUP85-224ENST00000583948 ESYT2A0FGR8 921 aa12.58□□□□□ -0.4
NUP85-224ENST00000583948 CDX4O14627 284 aaPredicted RBP12.58□□□□□ -0.4
NUP85-224ENST00000583948 PRRG1O14668 218 aa12.58□□□□□ -0.4
NUP85-224ENST00000583948 SLC37A4O43826 429 aa12.58□□□□□ -0.4
NUP85-224ENST00000583948 PAPSS2O95340 614 aaPredicted RBP12.58□□□□□ -0.4
NUP85-224ENST00000583948 LRG1P02750 347 aa12.58□□□□□ -0.4
NUP85-224ENST00000583948 EDN1P05305 212 aa12.58□□□□□ -0.4
NUP85-224ENST00000583948 FGFR3P22607 806 aa12.58□□□□□ -0.4
NUP85-224ENST00000583948 CTHP32929 405 aa12.58□□□□□ -0.4
NUP85-224ENST00000583948 TOB1P50616 345 aaPredicted RBP12.58□□□□□ -0.4
NUP85-224ENST00000583948 CLCNKBP51801 687 aa12.58□□□□□ -0.4
NUP85-224ENST00000583948 CTTNQ14247 550 aaKnown RBP12.58□□□□□ -0.4
NUP85-224ENST00000583948 UVSSAQ2YD98 709 aa12.58□□□□□ -0.4
NUP85-224ENST00000583948 MFSD6LQ8IWD5 586 aa12.58□□□□□ -0.4
NUP85-224ENST00000583948 GPR65Q8IYL9 337 aa12.58□□□□□ -0.4
NUP85-224ENST00000583948 LINC00301Q8NCQ3 95 aa12.58□□□□□ -0.4
NUP85-224ENST00000583948 ETNPPLQ8TBG4 499 aa12.58□□□□□ -0.4
NUP85-224ENST00000583948 CSGALNACT1Q8TDX6 532 aa12.58□□□□□ -0.4
NUP85-224ENST00000583948 SLC7A3Q8WY07 619 aa12.58□□□□□ -0.4
NUP85-224ENST00000583948 CYP4F11Q9HBI6 524 aa12.58□□□□□ -0.4
NUP85-224ENST00000583948 FSCN3Q9NQT6 498 aa12.58□□□□□ -0.4
NUP85-224ENST00000583948 ADAMTS9Q9P2N4 1935 aa12.57□□□□□ -0.4
NUP85-224ENST00000583948 TBX3O15119 743 aa12.57□□□□□ -0.4
NUP85-224ENST00000583948 MARCKSP29966 332 aaPredicted RBP12.57□□□□□ -0.4
NUP85-224ENST00000583948 FAM193AP78312 1265 aa12.57□□□□□ -0.4
NUP85-224ENST00000583948 CYP4A11Q02928 519 aa12.57□□□□□ -0.4
NUP85-224ENST00000583948 CCINQ13939 588 aa12.57□□□□□ -0.4
NUP85-224ENST00000583948 LRRC32Q14392 662 aa12.57□□□□□ -0.4
NUP85-224ENST00000583948 XKR9Q5GH70 373 aa12.57□□□□□ -0.4
NUP85-224ENST00000583948 TTC38Q5R3I4 469 aa12.57□□□□□ -0.4
NUP85-224ENST00000583948 PDZD4Q76G19 769 aaPredicted RBP12.57□□□□□ -0.4
NUP85-224ENST00000583948 MAEAQ7L5Y9 396 aa12.57□□□□□ -0.4
NUP85-224ENST00000583948 KRT25Q7Z3Z0 450 aa12.57□□□□□ -0.4
NUP85-224ENST00000583948 SHKBP1Q8TBC3 707 aa12.57□□□□□ -0.4
NUP85-224ENST00000583948 SYAP1Q96A49 352 aaPredicted RBP12.57□□□□□ -0.4
NUP85-224ENST00000583948 CRELD1Q96HD1 420 aa12.57□□□□□ -0.4
NUP85-224ENST00000583948 DYDC2Q96IM9 177 aa12.57□□□□□ -0.4
NUP85-224ENST00000583948 IER2Q9BTL4 223 aa12.57□□□□□ -0.4
NUP85-224ENST00000583948 SMG9Q9H0W8 520 aaKnown RBP12.57□□□□□ -0.4
NUP85-224ENST00000583948 FBRSL1Q9HCM7 1045 aaKnown RBP12.57□□□□□ -0.4
NUP85-224ENST00000583948 VPS45Q9NRW7 570 aa12.57□□□□□ -0.4
NUP85-224ENST00000583948 GDAQ9Y2T3 454 aa12.57□□□□□ -0.4
NUP85-224ENST00000583948 GPSM3Q9Y4H4 160 aa12.57□□□□□ -0.4
NUP85-224ENST00000583948 PCDHB6Q9Y5E3 794 aa12.57□□□□□ -0.4
NUP85-224ENST00000583948 ARHGEF37A1IGU5 675 aa12.56□□□□□ -0.4
NUP85-224ENST00000583948 MYBPHLA2RUH7 354 aa12.56□□□□□ -0.4
NUP85-224ENST00000583948 TMEM8BA6NDV4 472 aa12.56□□□□□ -0.4
NUP85-224ENST00000583948 FOXD2O60548 495 aaPredicted RBP12.56□□□□□ -0.4
NUP85-224ENST00000583948 RECQL4O94761 1208 aa12.56□□□□□ -0.4
NUP85-224ENST00000583948 CAVIN2O95810 425 aa12.56□□□□□ -0.4
NUP85-224ENST00000583948 CAPNS1P04632 268 aa12.56□□□□□ -0.4
NUP85-224ENST00000583948 POU2F2P09086 479 aa12.56□□□□□ -0.4
NUP85-224ENST00000583948 GLRA2P23416 452 aa12.56□□□□□ -0.4
NUP85-224ENST00000583948 QARSP47897 775 aaKnown RBP12.56□□□□□ -0.4
NUP85-224ENST00000583948 TWF1Q12792 350 aa12.56□□□□□ -0.4
NUP85-224ENST00000583948 SLC39A14Q15043 492 aa12.56□□□□□ -0.4
NUP85-224ENST00000583948 ZNF174Q15697 407 aa12.56□□□□□ -0.4
NUP85-224ENST00000583948 SLC27A1Q6PCB7 646 aa12.56□□□□□ -0.4
NUP85-224ENST00000583948 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.56□□□□□ -0.4
NUP85-224ENST00000583948 CHCHD4Q8N4Q1 142 aa12.56□□□□□ -0.4
NUP85-224ENST00000583948 HNRNPLLQ8WVV9 542 aaKnown RBP12.56□□□□□ -0.4
NUP85-224ENST00000583948 CHFRQ96EP1 664 aa12.56□□□□□ -0.4
NUP85-224ENST00000583948 GLT8D2Q9H1C3 349 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms