RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 E7ENQ6 273 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 POC1B-GALNT4F8VUJ3 575 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 CAPN9O14815 690 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 SPATA31D3P0C874 917 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 HARSP12081 509 aaKnown RBP11.13□□□□□ -0.63
TOP3A-214ENST00000582981 ETS1P14921 441 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 CHRNA5P30532 468 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 BPIFB4P59827 614 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 DHX34Q14147 1143 aaKnown RBP11.13□□□□□ -0.63
TOP3A-214ENST00000582981 RASA3Q14644 834 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 KIF22Q14807 665 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 SEZ6Q53EL9 994 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 RFWD3Q6PCD5 774 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 VSTM1Q6UX27 236 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 SPATA31D4Q6ZUB0 917 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 LCA5Q86VQ0 697 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 RHOT2Q8IXI1 618 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 C4orf33Q8N1A6 199 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 AGGF1Q8N302 714 aaeCLIP11.13□□□□□ -0.63
TOP3A-214ENST00000582981 CERKQ8TCT0 537 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 NACC1Q96RE7 527 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 CCDC134Q9H6E4 229 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.13□□□□□ -0.63
TOP3A-214ENST00000582981 ETNK2Q9NVF9 386 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 ZHX2Q9Y6X8 837 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 KAT6AQ92794 2004 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 GTPBP10A4D1E9 387 aaKnown RBP11.13□□□□□ -0.63
TOP3A-214ENST00000582981 WDR91A4D1P6 747 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 FAM187AA6NFU0 413 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 TBX3O15119 743 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 TP73O15350 636 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 ZNF189O75820 626 aaPredicted RBP11.13□□□□□ -0.63
TOP3A-214ENST00000582981 FOSP01100 380 aaPredicted RBP11.13□□□□□ -0.63
TOP3A-214ENST00000582981 KRT10P13645 584 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 RRM1P23921 792 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 SIX1Q15475 284 aaPredicted RBP11.13□□□□□ -0.63
TOP3A-214ENST00000582981 P3H1Q32P28 736 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 HAUS6Q7Z4H7 955 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 ANKS1BQ7Z6G8 1248 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 FAM136AQ96C01 138 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 DCLRE1BQ9H816 532 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 QTRT2Q9H974 415 aaKnown RBP11.13□□□□□ -0.63
TOP3A-214ENST00000582981 ALG13Q9NP73 1137 aaKnown RBP11.13□□□□□ -0.63
TOP3A-214ENST00000582981 DMAC2Q9NW81 257 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 PCDHA3Q9Y5H8 950 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 PASKQ96RG2 1323 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 ECE2O60344 883 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 KRT36O76013 467 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 TCF4P15884 667 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 NT5C2P49902 561 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 DNAJC3Q13217 504 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 SP8Q8IXZ3 490 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 C11orf70Q9BRQ4 267 aa11.13□□□□□ -0.63
TOP3A-214ENST00000582981 MAGEA13PA6NCF6 341 aa11.12□□□□□ -0.63
TOP3A-214ENST00000582981 EIF3DO15371 548 aaKnown RBP eCLIP11.12□□□□□ -0.63
TOP3A-214ENST00000582981 HNRNPCP07910 306 aaKnown RBP eCLIP11.12□□□□□ -0.63
TOP3A-214ENST00000582981 RALAP11233 206 aa11.12□□□□□ -0.63
TOP3A-214ENST00000582981 ALAS1P13196 640 aa11.12□□□□□ -0.63
TOP3A-214ENST00000582981 CYP11B1P15538 503 aa11.12□□□□□ -0.63
TOP3A-214ENST00000582981 MAPK4P31152 587 aa11.12□□□□□ -0.63
TOP3A-214ENST00000582981 INHBCP55103 352 aa11.12□□□□□ -0.63
TOP3A-214ENST00000582981 FASTKD3Q14CZ7 662 aaKnown RBP11.12□□□□□ -0.63
TOP3A-214ENST00000582981 ZRSR2Q15696 482 aaKnown RBP11.12□□□□□ -0.63
TOP3A-214ENST00000582981 CFAP157Q5JU67 520 aa11.12□□□□□ -0.63
TOP3A-214ENST00000582981 CCDC97Q96F63 343 aaPredicted RBP11.12□□□□□ -0.63
TOP3A-214ENST00000582981 KLF6Q99612 283 aaPredicted RBP11.12□□□□□ -0.63
TOP3A-214ENST00000582981 TEKT3Q9BXF9 490 aa11.12□□□□□ -0.63
TOP3A-214ENST00000582981 LRMDAQ9H2I8 198 aa11.12□□□□□ -0.63
TOP3A-214ENST00000582981 KCNH7Q9NS40 1196 aa11.12□□□□□ -0.63
TOP3A-214ENST00000582981 NKIRAS1Q9NYS0 192 aa11.12□□□□□ -0.63
TOP3A-214ENST00000582981 NOCTQ9UK39 431 aaKnown RBP11.12□□□□□ -0.63
TOP3A-214ENST00000582981 MTUS1Q9ULD2 1270 aa11.12□□□□□ -0.63
TOP3A-214ENST00000582981 CIITAP33076 1130 aa11.12□□□□□ -0.63
TOP3A-214ENST00000582981 GSTA5Q7RTV2 222 aa11.12□□□□□ -0.63
TOP3A-214ENST00000582981 XXYLT1Q8NBI6 393 aa11.12□□□□□ -0.63
TOP3A-214ENST00000582981 PTPRN2Q92932 1015 aa11.12□□□□□ -0.63
TOP3A-214ENST00000582981 IFT43Q96FT9 208 aa11.12□□□□□ -0.63
TOP3A-214ENST00000582981 GLT8D2Q9H1C3 349 aa11.12□□□□□ -0.63
TOP3A-214ENST00000582981 BTAF1O14981 1849 aa11.12□□□□□ -0.63
TOP3A-214ENST00000582981 WNK3Q9BYP7 1800 aa11.11□□□□□ -0.63
TOP3A-214ENST00000582981 RAD17O75943 681 aa11.11□□□□□ -0.63
TOP3A-214ENST00000582981 CTNNA2P26232 953 aa11.11□□□□□ -0.63
TOP3A-214ENST00000582981 CETN1Q12798 172 aa11.11□□□□□ -0.63
TOP3A-214ENST00000582981 TMED1Q13445 227 aa11.11□□□□□ -0.63
TOP3A-214ENST00000582981 XKR9Q5GH70 373 aa11.11□□□□□ -0.63
TOP3A-214ENST00000582981 CGB2Q6NT52 195 aa11.11□□□□□ -0.63
TOP3A-214ENST00000582981 HHIPL2Q6UWX4 724 aa11.11□□□□□ -0.63
TOP3A-214ENST00000582981 DSTYKQ6XUX3 929 aa11.11□□□□□ -0.63
TOP3A-214ENST00000582981 LDHDQ86WU2 507 aa11.11□□□□□ -0.63
TOP3A-214ENST00000582981 ARL10Q8N8L6 244 aa11.11□□□□□ -0.63
TOP3A-214ENST00000582981 STMN2Q93045 179 aa11.11□□□□□ -0.63
TOP3A-214ENST00000582981 CEP350Q5VT06 3117 aa11.11□□□□□ -0.63
TOP3A-214ENST00000582981 MMP10P09238 476 aa11.11□□□□□ -0.63
TOP3A-214ENST00000582981 RARGP13631 454 aa11.11□□□□□ -0.63
TOP3A-214ENST00000582981 ATF7P17544 494 aaPredicted RBP11.11□□□□□ -0.63
TOP3A-214ENST00000582981 ADSSP30520 456 aa11.11□□□□□ -0.63
TOP3A-214ENST00000582981 RASSF2P50749 326 aa11.11□□□□□ -0.63
TOP3A-214ENST00000582981 MPP3Q13368 585 aa11.11□□□□□ -0.63
TOP3A-214ENST00000582981 SNRNP35Q16560 246 aaKnown RBP11.11□□□□□ -0.63
TOP3A-214ENST00000582981 PARP6Q2NL67 630 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms