RNA–Protein interactions for RNA: ENST00000582923.1

PDLIM1P2-201, Transcript of PDZ and LIM domain 1 pseudogene 2, humanhuman

BASIC

Gene PDLIM1P2, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P2-201ENST00000582923 SNX9Q9Y5X1 595 aa9.77□□□□□ -0.85
PDLIM1P2-201ENST00000582923 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 ARHGEF37A1IGU5 675 aa9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 LCHNA4D1U4 455 aa9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 KPNA7A9QM74 516 aa9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 NT5C1B-RDH14C9J2C7 533 aa9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 F8W810 466 aa9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 TMEM189-UBE2V1I3L0A0 370 aa9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 I3L4J1 428 aa9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 TRAPPC3O43617 180 aa9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 LRRN2O75325 713 aa9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 TADA2AO75478 443 aa9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 ADCY5O95622 1261 aa9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 STAU1O95793 577 aaKnown RBP9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 CST3P01034 146 aaPredicted RBP9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 ALDH2P05091 517 aa9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 ITGB1P05556 798 aa9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 CA3P07451 260 aa9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 GALTP07902 379 aa9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 TPM1P09493 284 aa9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 ODC1P11926 461 aa9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 TRIM21P19474 475 aaKnown RBP9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 RFX1P22670 979 aa9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 PAX3P23760 479 aa9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 BRCC3P46736 316 aa9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 LILRA4P59901 499 aa9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 APBA1Q02410 837 aa9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 KCNMA1Q12791 1236 aa9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 RAPGEF1Q13905 1077 aa9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 SCARA3Q6AZY7 606 aa9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 KCNT2Q6UVM3 1135 aa9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 CACNA2D4Q7Z3S7 1137 aa9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 TMC6Q7Z403 805 aa9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 VSTM4Q8IW00 320 aa9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 ARHGEF19Q8IW93 802 aa9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 TMEM169Q96HH4 297 aa9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 APOBEC3GQ9HC16 384 aaKnown RBP9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 MARCH5Q9NX47 278 aa9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 SPG21Q9NZD8 308 aa9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 ADAM28Q9UKQ2 775 aa9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 MTUS1Q9ULD2 1270 aa9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 POLIQ9UNA4 740 aa9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 RWDD3Q9Y3V2 267 aa9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 SF3B1O75533 1304 aaKnown RBP eCLIP9.76□□□□□ -0.85
PDLIM1P2-201ENST00000582923 TSC2P49815 1807 aa9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 CEP290O15078 2479 aa9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 NLRC5Q86WI3 1866 aa9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 LINC01553A4QN01 128 aa9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 GOLGA6L6A8MZA4 724 aa9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 CYB561D2O14569 222 aa9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 SPTLC1O15269 473 aa9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 HUS1O60921 280 aa9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 MYOGP15173 224 aa9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 CD58P19256 250 aa9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 TBXAS1P24557 533 aaPredicted RBP9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 PBX1P40424 430 aa9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 ASPAP45381 313 aa9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 RAP1GAPP47736 663 aa9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 MFAP3P55082 362 aa9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 POLR2FP61218 127 aaKnown RBP9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 YWHAEP62258 255 aaKnown RBP9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 ELAVL2Q12926 359 aaKnown RBP9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 CUL2Q13617 745 aa9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 ARHGAP44Q17R89 818 aa9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 KLHDC7AQ5VTJ3 777 aa9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 SPECC1LQ69YQ0 1117 aa9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 IQCEQ6IPM2 695 aa9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 FUT10Q6P4F1 479 aa9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 GJB7Q6PEY0 223 aa9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 RRAGAQ7L523 313 aa9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 PPFIBP1Q86W92 1011 aa9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 METTL23Q86XA0 190 aa9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 SLC39A11Q8N1S5 342 aa9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 APPL2Q8NEU8 664 aa9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 LMO3Q8TAP4 145 aa9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 TATDN2Q93075 761 aa9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 IGSF21Q96ID5 467 aa9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 SENP8Q96LD8 212 aa9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 FAM81BQ96LP2 452 aa9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 ARID3AQ99856 593 aa9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 NKX2-4Q9H2Z4 354 aa9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 SMYD3Q9H7B4 428 aa9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 VRTNQ9H8Y1 702 aa9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 SIX2Q9NPC8 291 aa9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 UBE2TQ9NPD8 197 aaPredicted RBP9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 NLRC4Q9NPP4 1024 aa9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 PLCB1Q9NQ66 1216 aa9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 DNAJC12Q9UKB3 198 aa9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 YBX2Q9Y2T7 364 aaKnown RBP9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 FHOD1Q9Y613 1164 aa9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 ITIH6Q6UXX5 1313 aa9.75□□□□□ -0.85
PDLIM1P2-201ENST00000582923 EPHB6O15197 1021 aa9.74□□□□□ -0.85
PDLIM1P2-201ENST00000582923 UCHL3P15374 230 aa9.74□□□□□ -0.85
PDLIM1P2-201ENST00000582923 IGFBP6P24592 240 aaPredicted RBP9.74□□□□□ -0.85
PDLIM1P2-201ENST00000582923 CDC25BP30305 580 aa9.74□□□□□ -0.85
PDLIM1P2-201ENST00000582923 PBX2P40425 430 aa9.74□□□□□ -0.85
PDLIM1P2-201ENST00000582923 USP8P40818 1118 aa9.74□□□□□ -0.85
PDLIM1P2-201ENST00000582923 GCNT1Q02742 428 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms