RNA–Protein interactions for RNA: ENST00000582486.5

GGA3-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5 BASIC

Gene GGA3, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-213ENST00000582486 CYP1A2P05177 515 aa11.96□□□□□ -0.49
GGA3-213ENST00000582486 POLR2BP30876 1174 aaKnown RBP11.96□□□□□ -0.49
GGA3-213ENST00000582486 PAFAH1B1P43034 410 aa11.96□□□□□ -0.49
GGA3-213ENST00000582486 RAP1GAPP47736 663 aa11.96□□□□□ -0.49
GGA3-213ENST00000582486 HADHBP55084 474 aaKnown RBP11.96□□□□□ -0.49
GGA3-213ENST00000582486 TCEAL1Q15170 157 aa11.96□□□□□ -0.49
GGA3-213ENST00000582486 CFAP221Q4G0U5 840 aa11.96□□□□□ -0.49
GGA3-213ENST00000582486 ZNF667Q5HYK9 610 aa11.96□□□□□ -0.49
GGA3-213ENST00000582486 NAA35Q5VZE5 725 aa11.96□□□□□ -0.49
GGA3-213ENST00000582486 GDF6Q6KF10 455 aaPredicted RBP11.96□□□□□ -0.49
GGA3-213ENST00000582486 ZNF572Q7Z3I7 529 aaPredicted RBP11.96□□□□□ -0.49
GGA3-213ENST00000582486 SPATA4Q8NEY3 305 aa11.96□□□□□ -0.49
GGA3-213ENST00000582486 ZNF606Q8WXB4 792 aa11.96□□□□□ -0.49
GGA3-213ENST00000582486 KIF12Q96FN5 646 aa11.96□□□□□ -0.49
GGA3-213ENST00000582486 TRIM6Q9C030 488 aaPredicted RBP11.96□□□□□ -0.49
GGA3-213ENST00000582486 RNF216Q9NWF9 866 aaPredicted RBP11.96□□□□□ -0.49
GGA3-213ENST00000582486 GTF3C4Q9UKN8 822 aa11.96□□□□□ -0.49
GGA3-213ENST00000582486 SCN10AQ9Y5Y9 1956 aa11.96□□□□□ -0.5
GGA3-213ENST00000582486 ASGR1P07306 291 aa11.95□□□□□ -0.5
GGA3-213ENST00000582486 AXLP30530 894 aa11.95□□□□□ -0.5
GGA3-213ENST00000582486 CLCN6P51797 869 aa11.95□□□□□ -0.5
GGA3-213ENST00000582486 CDH8P55286 799 aa11.95□□□□□ -0.5
GGA3-213ENST00000582486 RNASE9P60153 205 aaKnown RBP11.95□□□□□ -0.5
GGA3-213ENST00000582486 C2CD6Q53TS8 623 aa11.95□□□□□ -0.5
GGA3-213ENST00000582486 FAM47CQ5HY64 1035 aa11.95□□□□□ -0.5
GGA3-213ENST00000582486 TAF2Q6P1X5 1199 aa11.95□□□□□ -0.5
GGA3-213ENST00000582486 APBB1IPQ7Z5R6 666 aaPredicted RBP11.95□□□□□ -0.5
GGA3-213ENST00000582486 MCOLN2Q8IZK6 566 aa11.95□□□□□ -0.5
GGA3-213ENST00000582486 CD99L2Q8TCZ2 262 aa11.95□□□□□ -0.5
GGA3-213ENST00000582486 HES6Q96HZ4 224 aa11.95□□□□□ -0.5
GGA3-213ENST00000582486 ZMAT2Q96NC0 199 aaKnown RBP11.95□□□□□ -0.5
GGA3-213ENST00000582486 PNKPQ96T60 521 aa11.95□□□□□ -0.5
GGA3-213ENST00000582486 NUP85Q9BW27 656 aa11.95□□□□□ -0.5
GGA3-213ENST00000582486 NXF3Q9H4D5 531 aaKnown RBP11.95□□□□□ -0.5
GGA3-213ENST00000582486 PRDM10Q9NQV6 1147 aa11.95□□□□□ -0.5
GGA3-213ENST00000582486 DPP3Q9NY33 737 aa11.95□□□□□ -0.5
GGA3-213ENST00000582486 RNF14Q9UBS8 474 aa11.95□□□□□ -0.5
GGA3-213ENST00000582486 CNOT8Q9UFF9 292 aaKnown RBP11.95□□□□□ -0.5
GGA3-213ENST00000582486 SRRDQ9UH36 339 aa11.95□□□□□ -0.5
GGA3-213ENST00000582486 AGAP1Q9UPQ3 857 aa11.95□□□□□ -0.5
GGA3-213ENST00000582486 NSFP46459 744 aaKnown RBP11.95□□□□□ -0.5
GGA3-213ENST00000582486 NKX3-2P78367 333 aa11.95□□□□□ -0.5
GGA3-213ENST00000582486 CENPCQ03188 943 aa11.95□□□□□ -0.5
GGA3-213ENST00000582486 KCNA10Q16322 511 aa11.95□□□□□ -0.5
GGA3-213ENST00000582486 CD302Q8IX05 232 aa11.95□□□□□ -0.5
GGA3-213ENST00000582486 MSANTD4Q8NCY6 345 aa11.95□□□□□ -0.5
GGA3-213ENST00000582486 ZNF564Q8TBZ8 553 aaPredicted RBP11.95□□□□□ -0.5
GGA3-213ENST00000582486 BTBD6Q96KE9 485 aa11.95□□□□□ -0.5
GGA3-213ENST00000582486 APOL6Q9BWW8 343 aa11.95□□□□□ -0.5
GGA3-213ENST00000582486 BCO2Q9BYV7 579 aa11.95□□□□□ -0.5
GGA3-213ENST00000582486 CELF4Q9BZC1 486 aaKnown RBP11.95□□□□□ -0.5
GGA3-213ENST00000582486 PLEKHA5Q9HAU0 1116 aa11.95□□□□□ -0.5
GGA3-213ENST00000582486 RNF19AQ9NV58 838 aa11.95□□□□□ -0.5
GGA3-213ENST00000582486 ALG6Q9Y672 507 aa11.95□□□□□ -0.5
GGA3-213ENST00000582486 TRIP11Q15643 1979 aa11.95□□□□□ -0.5
GGA3-213ENST00000582486 TMEM110-MUSTN1A8MSY1 372 aa11.94□□□□□ -0.5
GGA3-213ENST00000582486 MTA2O94776 668 aa11.94□□□□□ -0.5
GGA3-213ENST00000582486 AKAP5P24588 427 aa11.94□□□□□ -0.5
GGA3-213ENST00000582486 BRD2P25440 801 aaKnown RBP11.94□□□□□ -0.5
GGA3-213ENST00000582486 ATICP31939 592 aa11.94□□□□□ -0.5
GGA3-213ENST00000582486 APLP1P51693 650 aa11.94□□□□□ -0.5
GGA3-213ENST00000582486 YARSP54577 528 aaKnown RBP11.94□□□□□ -0.5
GGA3-213ENST00000582486 NOMO3P69849 1222 aa11.94□□□□□ -0.5
GGA3-213ENST00000582486 MESDQ14696 234 aa11.94□□□□□ -0.5
GGA3-213ENST00000582486 PHLDB2Q86SQ0 1253 aa11.94□□□□□ -0.5
GGA3-213ENST00000582486 NT5DC4Q86YG4 428 aa11.94□□□□□ -0.5
GGA3-213ENST00000582486 WNT8BQ93098 351 aa11.94□□□□□ -0.5
GGA3-213ENST00000582486 HPDLQ96IR7 371 aa11.94□□□□□ -0.5
GGA3-213ENST00000582486 SNX27Q96L92 541 aa11.94□□□□□ -0.5
GGA3-213ENST00000582486 ZSWIM1Q9BR11 485 aa11.94□□□□□ -0.5
GGA3-213ENST00000582486 SDCBP2Q9H190 292 aa11.94□□□□□ -0.5
GGA3-213ENST00000582486 SMYD3Q9H7B4 428 aa11.94□□□□□ -0.5
GGA3-213ENST00000582486 VRTNQ9H8Y1 702 aa11.94□□□□□ -0.5
GGA3-213ENST00000582486 ITGA11Q9UKX5 1188 aa11.94□□□□□ -0.5
GGA3-213ENST00000582486 CASP8AP2Q9UKL3 1982 aa11.94□□□□□ -0.5
GGA3-213ENST00000582486 CES2O00748 559 aa11.94□□□□□ -0.5
GGA3-213ENST00000582486 CEP104O60308 925 aa11.94□□□□□ -0.5
GGA3-213ENST00000582486 RECQL4O94761 1208 aa11.94□□□□□ -0.5
GGA3-213ENST00000582486 MRPS6P82932 125 aaKnown RBP11.94□□□□□ -0.5
GGA3-213ENST00000582486 RBP5P82980 135 aa11.94□□□□□ -0.5
GGA3-213ENST00000582486 ITIH3Q06033 890 aa11.94□□□□□ -0.5
GGA3-213ENST00000582486 GLRA4Q5JXX5 417 aa11.94□□□□□ -0.5
GGA3-213ENST00000582486 C11orf63Q6NUN7 778 aa11.94□□□□□ -0.5
GGA3-213ENST00000582486 LLGL2Q6P1M3 1020 aa11.94□□□□□ -0.5
GGA3-213ENST00000582486 TRIM72Q6ZMU5 477 aa11.94□□□□□ -0.5
GGA3-213ENST00000582486 MON1BQ7L1V2 547 aa11.94□□□□□ -0.5
GGA3-213ENST00000582486 FAM228AQ86W67 206 aa11.94□□□□□ -0.5
GGA3-213ENST00000582486 KLHDC9Q8NEP7 349 aa11.94□□□□□ -0.5
GGA3-213ENST00000582486 PBKQ96KB5 322 aa11.94□□□□□ -0.5
GGA3-213ENST00000582486 CALR3Q96L12 384 aaKnown RBP11.94□□□□□ -0.5
GGA3-213ENST00000582486 CFHR5Q9BXR6 569 aa11.94□□□□□ -0.5
GGA3-213ENST00000582486 ARGLU1Q9NWB6 273 aaPredicted RBP11.94□□□□□ -0.5
GGA3-213ENST00000582486 UVRAGQ9P2Y5 699 aa11.94□□□□□ -0.5
GGA3-213ENST00000582486 NOC2LQ9Y3T9 749 aaKnown RBP11.94□□□□□ -0.5
GGA3-213ENST00000582486 CDY2AQ9Y6F7 541 aa11.94□□□□□ -0.5
GGA3-213ENST00000582486 RRM1P23921 792 aa11.93□□□□□ -0.5
GGA3-213ENST00000582486 HOXD10P28358 340 aa11.93□□□□□ -0.5
GGA3-213ENST00000582486 YWHAEP62258 255 aaKnown RBP11.93□□□□□ -0.5
GGA3-213ENST00000582486 CBX1P83916 185 aa11.93□□□□□ -0.5
GGA3-213ENST00000582486 UBXN11Q5T124 520 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms