RNA–Protein interactions for RNA: ENST00000582232.1

GGA3-211, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-211ENST00000582232 M0QZQ0 153 aa12.36□□□□□ -0.43
GGA3-211ENST00000582232 SPTLC1O15269 473 aa12.36□□□□□ -0.43
GGA3-211ENST00000582232 B3GAT3O94766 335 aa12.36□□□□□ -0.43
GGA3-211ENST00000582232 NOL4O94818 638 aa12.36□□□□□ -0.43
GGA3-211ENST00000582232 P4HA1P13674 534 aa12.36□□□□□ -0.43
GGA3-211ENST00000582232 CDC25BP30305 580 aa12.36□□□□□ -0.43
GGA3-211ENST00000582232 GCNT1Q02742 428 aa12.36□□□□□ -0.43
GGA3-211ENST00000582232 ZNF667Q5HYK9 610 aa12.36□□□□□ -0.43
GGA3-211ENST00000582232 KLHDC7AQ5VTJ3 777 aa12.36□□□□□ -0.43
GGA3-211ENST00000582232 FAM109BQ6ICB4 259 aaPredicted RBP12.36□□□□□ -0.43
GGA3-211ENST00000582232 PHLDB3Q6NSJ2 640 aa12.36□□□□□ -0.43
GGA3-211ENST00000582232 DPH6Q7L8W6 267 aa12.36□□□□□ -0.43
GGA3-211ENST00000582232 VSTM4Q8IW00 320 aa12.36□□□□□ -0.43
GGA3-211ENST00000582232 COLGALT1Q8NBJ5 622 aa12.36□□□□□ -0.43
GGA3-211ENST00000582232 SPATA18Q8TC71 538 aa12.36□□□□□ -0.43
GGA3-211ENST00000582232 JAKMIP2Q96AA8 810 aa12.36□□□□□ -0.43
GGA3-211ENST00000582232 IQCDQ96DY2 449 aa12.36□□□□□ -0.43
GGA3-211ENST00000582232 SUSD3Q96L08 255 aa12.36□□□□□ -0.43
GGA3-211ENST00000582232 ZNF558Q96NG5 402 aa12.36□□□□□ -0.43
GGA3-211ENST00000582232 PI4K2AQ9BTU6 479 aa12.36□□□□□ -0.43
GGA3-211ENST00000582232 BCO2Q9BYV7 579 aa12.36□□□□□ -0.43
GGA3-211ENST00000582232 EDEM3Q9BZQ6 932 aa12.36□□□□□ -0.43
GGA3-211ENST00000582232 NIF3L1Q9GZT8 377 aa12.36□□□□□ -0.43
GGA3-211ENST00000582232 APOBEC3GQ9HC16 384 aaKnown RBP12.36□□□□□ -0.43
GGA3-211ENST00000582232 MARCH5Q9NX47 278 aa12.36□□□□□ -0.43
GGA3-211ENST00000582232 CACNG4Q9UBN1 327 aa12.36□□□□□ -0.43
GGA3-211ENST00000582232 APEX2Q9UBZ4 518 aa12.36□□□□□ -0.43
GGA3-211ENST00000582232 ADAM28Q9UKQ2 775 aa12.36□□□□□ -0.43
GGA3-211ENST00000582232 NUB1Q9Y5A7 615 aa12.36□□□□□ -0.43
GGA3-211ENST00000582232 ARHGEF37A1IGU5 675 aa12.35□□□□□ -0.43
GGA3-211ENST00000582232 LCHNA4D1U4 455 aa12.35□□□□□ -0.43
GGA3-211ENST00000582232 LINC01553A4QN01 128 aa12.35□□□□□ -0.43
GGA3-211ENST00000582232 TRAPPC3O43617 180 aa12.35□□□□□ -0.43
GGA3-211ENST00000582232 KIF4AO95239 1232 aa12.35□□□□□ -0.43
GGA3-211ENST00000582232 TBXAS1P24557 533 aaPredicted RBP12.35□□□□□ -0.43
GGA3-211ENST00000582232 IGFBP6P24592 240 aaPredicted RBP12.35□□□□□ -0.43
GGA3-211ENST00000582232 PPM1AP35813 382 aa12.35□□□□□ -0.43
GGA3-211ENST00000582232 RABGGTBP53611 331 aa12.35□□□□□ -0.43
GGA3-211ENST00000582232 ELAVL2Q12926 359 aaKnown RBP12.35□□□□□ -0.43
GGA3-211ENST00000582232 RAB30Q15771 203 aa12.35□□□□□ -0.43
GGA3-211ENST00000582232 WDR72Q3MJ13 1102 aa12.35□□□□□ -0.43
GGA3-211ENST00000582232 TIGD5Q53EQ6 642 aa12.35□□□□□ -0.43
GGA3-211ENST00000582232 SPOUT1Q5T280 376 aaKnown RBP12.35□□□□□ -0.43
GGA3-211ENST00000582232 SPECC1LQ69YQ0 1117 aa12.35□□□□□ -0.43
GGA3-211ENST00000582232 SPOPLQ6IQ16 392 aa12.35□□□□□ -0.43
GGA3-211ENST00000582232 CHRDL2Q6WN34 429 aa12.35□□□□□ -0.43
GGA3-211ENST00000582232 ENOSF1Q7L5Y1 443 aa12.35□□□□□ -0.43
GGA3-211ENST00000582232 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.35□□□□□ -0.43
GGA3-211ENST00000582232 RNF168Q8IYW5 571 aaPredicted RBP12.35□□□□□ -0.43
GGA3-211ENST00000582232 SLC39A11Q8N1S5 342 aa12.35□□□□□ -0.43
GGA3-211ENST00000582232 TOP6BLQ8N6T0 577 aa12.35□□□□□ -0.43
GGA3-211ENST00000582232 TATDN2Q93075 761 aa12.35□□□□□ -0.43
GGA3-211ENST00000582232 IGSF21Q96ID5 467 aa12.35□□□□□ -0.43
GGA3-211ENST00000582232 SAMD11Q96NU1 681 aa12.35□□□□□ -0.43
GGA3-211ENST00000582232 NUP58Q9BVL2 599 aa12.35□□□□□ -0.43
GGA3-211ENST00000582232 LSM14BQ9BX40 385 aaKnown RBP12.35□□□□□ -0.43
GGA3-211ENST00000582232 PLVAPQ9BX97 442 aa12.35□□□□□ -0.43
GGA3-211ENST00000582232 NAA15Q9BXJ9 866 aaKnown RBP12.35□□□□□ -0.43
GGA3-211ENST00000582232 TTYH3Q9C0H2 523 aa12.35□□□□□ -0.43
GGA3-211ENST00000582232 GANQ9H2C0 597 aa12.35□□□□□ -0.43
GGA3-211ENST00000582232 CYP3A43Q9HB55 503 aa12.35□□□□□ -0.43
GGA3-211ENST00000582232 STK39Q9UEW8 545 aa12.35□□□□□ -0.43
GGA3-211ENST00000582232 PCDHB12Q9Y5F1 795 aa12.35□□□□□ -0.43
GGA3-211ENST00000582232 C5orf67F2Z3F1 127 aa12.34□□□□□ -0.43
GGA3-211ENST00000582232 F8W810 466 aa12.34□□□□□ -0.43
GGA3-211ENST00000582232 TACC1O75410 805 aa12.34□□□□□ -0.43
GGA3-211ENST00000582232 TADA2AO75478 443 aa12.34□□□□□ -0.43
GGA3-211ENST00000582232 ADCY5O95622 1261 aa12.34□□□□□ -0.43
GGA3-211ENST00000582232 CYP11A1P05108 521 aa12.34□□□□□ -0.43
GGA3-211ENST00000582232 ITGB1P05556 798 aa12.34□□□□□ -0.43
GGA3-211ENST00000582232 RB1P06400 928 aa12.34□□□□□ -0.43
GGA3-211ENST00000582232 UCHL3P15374 230 aa12.34□□□□□ -0.43
GGA3-211ENST00000582232 TYMPP19971 482 aa12.34□□□□□ -0.43
GGA3-211ENST00000582232 BMPR1AP36894 532 aa12.34□□□□□ -0.43
GGA3-211ENST00000582232 ASPAP45381 313 aa12.34□□□□□ -0.43
GGA3-211ENST00000582232 KLK7P49862 253 aa12.34□□□□□ -0.43
GGA3-211ENST00000582232 TNNC1P63316 161 aa12.34□□□□□ -0.43
GGA3-211ENST00000582232 SMAD3P84022 425 aaKnown RBP12.34□□□□□ -0.43
GGA3-211ENST00000582232 PLCB3Q01970 1234 aa12.34□□□□□ -0.43
GGA3-211ENST00000582232 CUL2Q13617 745 aa12.34□□□□□ -0.43
GGA3-211ENST00000582232 ARHGEF19Q8IW93 802 aa12.34□□□□□ -0.43
GGA3-211ENST00000582232 TTC39CQ8N584 583 aa12.34□□□□□ -0.43
GGA3-211ENST00000582232 NEK11Q8NG66 645 aa12.34□□□□□ -0.43
GGA3-211ENST00000582232 RABGGTAQ92696 567 aa12.34□□□□□ -0.43
GGA3-211ENST00000582232 SENP8Q96LD8 212 aa12.34□□□□□ -0.43
GGA3-211ENST00000582232 PBX4Q9BYU1 374 aa12.34□□□□□ -0.43
GGA3-211ENST00000582232 SPG21Q9NZD8 308 aa12.34□□□□□ -0.43
GGA3-211ENST00000582232 CEP72Q9P209 647 aa12.34□□□□□ -0.43
GGA3-211ENST00000582232 PRG3Q9Y2Y8 225 aaPredicted RBP12.34□□□□□ -0.43
GGA3-211ENST00000582232 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.34□□□□□ -0.433e-9■■□□□ 12.8
GGA3-211ENST00000582232 SNX9Q9Y5X1 595 aa12.34□□□□□ -0.43
GGA3-211ENST00000582232 VWA8A3KMH1 1905 aa12.34□□□□□ -0.43
GGA3-211ENST00000582232 TSC2P49815 1807 aa12.34□□□□□ -0.43
GGA3-211ENST00000582232 SF3B1O75533 1304 aaKnown RBP eCLIP12.34□□□□□ -0.43
GGA3-211ENST00000582232 A0A1W2PQJ5 194 aa12.33□□□□□ -0.44
GGA3-211ENST00000582232 NT5C1B-RDH14C9J2C7 533 aa12.33□□□□□ -0.44
GGA3-211ENST00000582232 CYB561D2O14569 222 aa12.33□□□□□ -0.44
GGA3-211ENST00000582232 SYN3O14994 580 aa12.33□□□□□ -0.44
GGA3-211ENST00000582232 EPHB6O15197 1021 aa12.33□□□□□ -0.44
GGA3-211ENST00000582232 HUS1O60921 280 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms