RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 HAPLN2Q9GZV7 340 aa9.94□□□□□ -0.82
SS18-220ENST00000582092 CDT1Q9H211 546 aa9.94□□□□□ -0.82
SS18-220ENST00000582092 ASB7Q9H672 318 aa9.94□□□□□ -0.82
SS18-220ENST00000582092 IFT122Q9HBG6 1241 aa9.94□□□□□ -0.82
SS18-220ENST00000582092 TRMT13Q9NUP7 481 aaKnown RBP9.94□□□□□ -0.82
SS18-220ENST00000582092 RNF14Q9UBS8 474 aa9.94□□□□□ -0.82
SS18-220ENST00000582092 PCDHB2Q9Y5E7 798 aa9.94□□□□□ -0.82
SS18-220ENST00000582092 LACTBL1A8MY62 500 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 THAP12O43422 761 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 XPOTO43592 962 aaKnown RBP9.93□□□□□ -0.82
SS18-220ENST00000582092 ERLIN1O75477 346 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 CSDE1O75534 798 aaKnown RBP9.93□□□□□ -0.82
SS18-220ENST00000582092 PROZP22891 400 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 CCL23P55773 120 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 CDR2Q01850 454 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 TMEM62Q0P6H9 643 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 MYO1EQ12965 1108 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 TMEM132DQ14C87 1099 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 CFAP221Q4G0U5 840 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 ZNF667Q5HYK9 610 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 ZBTB41Q5SVQ8 909 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 C9orf50Q5SZB4 431 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 EEF1DP3Q658K8 133 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 FAM109BQ6ICB4 259 aaPredicted RBP9.93□□□□□ -0.82
SS18-220ENST00000582092 TMEM270Q6UE05 265 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 CDR2LQ86X02 465 aaPredicted RBP9.93□□□□□ -0.82
SS18-220ENST00000582092 NT5DC4Q86YG4 428 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 HACE1Q8IYU2 909 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 DEFB123Q8N688 67 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 LINC01465Q8N7H1 131 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 OR5B17Q8NGF7 314 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 SLC30A5Q8TAD4 765 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 LNX1Q8TBB1 728 aaPredicted RBP9.93□□□□□ -0.82
SS18-220ENST00000582092 SLC35G2Q8TBE7 412 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 SLC20A1Q8WUM9 679 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 RFFLQ8WZ73 363 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 TSC1Q92574 1164 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 KAT5Q92993 513 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 LRCH3Q96II8 777 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 PBKQ96KB5 322 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 KREMEN1Q96MU8 473 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 OSBPL9Q96SU4 736 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 MTMR12Q9C0I1 747 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 GPR88Q9GZN0 384 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 NIF3L1Q9GZT8 377 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 PDZD7Q9H5P4 517 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 MINDY3Q9H8M7 445 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 HDAC6Q9UBN7 1215 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 GTF2IRD1Q9UHL9 959 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 SNX12Q9UMY4 172 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 CEP83Q9Y592 693 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 CAPN6Q9Y6Q1 641 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 EVPLQ92817 2033 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 TANC1Q9C0D5 1861 aa9.93□□□□□ -0.82
SS18-220ENST00000582092 SCN5AQ14524 2016 aa9.92□□□□□ -0.82
SS18-220ENST00000582092 TTLL13PA6NNM8 815 aa9.92□□□□□ -0.82
SS18-220ENST00000582092 SOX1O00570 391 aaPredicted RBP9.92□□□□□ -0.82
SS18-220ENST00000582092 MED7O43513 233 aa9.92□□□□□ -0.82
SS18-220ENST00000582092 TSPAN1O60635 241 aa9.92□□□□□ -0.82
SS18-220ENST00000582092 TADA3O75528 432 aa9.92□□□□□ -0.82
SS18-220ENST00000582092 NPTXRO95502 500 aa9.92□□□□□ -0.82
SS18-220ENST00000582092 FTCDO95954 541 aa9.92□□□□□ -0.82
SS18-220ENST00000582092 MMEP08473 750 aa9.92□□□□□ -0.82
SS18-220ENST00000582092 CXCL8P10145 99 aa9.92□□□□□ -0.82
SS18-220ENST00000582092 ARF4P18085 180 aaPredicted RBP9.92□□□□□ -0.82
SS18-220ENST00000582092 GNA15P30679 374 aa9.92□□□□□ -0.82
SS18-220ENST00000582092 ATICP31939 592 aa9.92□□□□□ -0.82
SS18-220ENST00000582092 NSFP46459 744 aaKnown RBP9.92□□□□□ -0.82
SS18-220ENST00000582092 DNA2P51530 1060 aa9.92□□□□□ -0.82
SS18-220ENST00000582092 MYL6P60660 151 aa9.92□□□□□ -0.82
SS18-220ENST00000582092 RBP5P82980 135 aa9.92□□□□□ -0.82
SS18-220ENST00000582092 PTK7Q13308 1070 aa9.92□□□□□ -0.82
SS18-220ENST00000582092 CLUL1Q15846 466 aa9.92□□□□□ -0.82
SS18-220ENST00000582092 TMEM240Q5SV17 173 aa9.92□□□□□ -0.82
SS18-220ENST00000582092 MARCH8Q5T0T0 291 aa9.92□□□□□ -0.82
SS18-220ENST00000582092 SMYD5Q6GMV2 418 aa9.92□□□□□ -0.82
SS18-220ENST00000582092 ACAD10Q6JQN1 1059 aa9.92□□□□□ -0.82
SS18-220ENST00000582092 TAF2Q6P1X5 1199 aa9.92□□□□□ -0.82
SS18-220ENST00000582092 SLC27A1Q6PCB7 646 aa9.92□□□□□ -0.82
SS18-220ENST00000582092 ZNF365Q70YC5 407 aa9.92□□□□□ -0.82
SS18-220ENST00000582092 NOP9Q86U38 636 aaKnown RBP9.92□□□□□ -0.82
SS18-220ENST00000582092 SLC47A2Q86VL8 602 aa9.92□□□□□ -0.82
SS18-220ENST00000582092 TTC39CQ8N584 583 aa9.92□□□□□ -0.82
SS18-220ENST00000582092 UBL4BQ8N7F7 174 aa9.92□□□□□ -0.82
SS18-220ENST00000582092 TPCN2Q8NHX9 752 aa9.92□□□□□ -0.82
SS18-220ENST00000582092 EPS8L1Q8TE68 723 aa9.92□□□□□ -0.82
SS18-220ENST00000582092 DNAJB3Q8WWF6 145 aa9.92□□□□□ -0.82
SS18-220ENST00000582092 KAT2BQ92831 832 aa9.92□□□□□ -0.82
SS18-220ENST00000582092 ZNF653Q96CK0 615 aa9.92□□□□□ -0.82
SS18-220ENST00000582092 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.92□□□□□ -0.82
SS18-220ENST00000582092 PTPRHQ9HD43 1115 aa9.92□□□□□ -0.82
SS18-220ENST00000582092 NXF1Q9UBU9 619 aaKnown RBP9.92□□□□□ -0.82
SS18-220ENST00000582092 TMEM265A0A087WTH1 108 aa9.91□□□□□ -0.82
SS18-220ENST00000582092 A0A1B0GUA9 196 aa9.91□□□□□ -0.82
SS18-220ENST00000582092 TMEM110-MUSTN1A8MSY1 372 aa9.91□□□□□ -0.82
SS18-220ENST00000582092 HAS3O00219 553 aa9.91□□□□□ -0.82
SS18-220ENST00000582092 SRGAP2O75044 1071 aa9.91□□□□□ -0.82
SS18-220ENST00000582092 VNN1O95497 513 aa9.91□□□□□ -0.82
SS18-220ENST00000582092 EDN1P05305 212 aa9.91□□□□□ -0.82
SS18-220ENST00000582092 MYBL1P10243 752 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms