RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 LIMS2Q7Z4I7 341 aa13.66□□□□□ -0.22
SNORD55-201ENST00000581525 CEP57Q86XR8 500 aa13.66□□□□□ -0.22
SNORD55-201ENST00000581525 WDR49Q8IV35 697 aa13.66□□□□□ -0.22
SNORD55-201ENST00000581525 LRRC52Q8N7C0 313 aa13.66□□□□□ -0.22
SNORD55-201ENST00000581525 NECTIN4Q96NY8 510 aa13.66□□□□□ -0.22
SNORD55-201ENST00000581525 PHF7Q9BWX1 381 aaPredicted RBP13.66□□□□□ -0.22
SNORD55-201ENST00000581525 SFXN1Q9H9B4 322 aa13.66□□□□□ -0.22
SNORD55-201ENST00000581525 ZDHHC7Q9NXF8 308 aa13.66□□□□□ -0.22
SNORD55-201ENST00000581525 FBXW11Q9UKB1 542 aa13.66□□□□□ -0.22
SNORD55-201ENST00000581525 NUB1Q9Y5A7 615 aa13.66□□□□□ -0.22
SNORD55-201ENST00000581525 PCDHA5Q9Y5H7 936 aa13.66□□□□□ -0.22
SNORD55-201ENST00000581525 NCOR1O75376 2440 aa13.66□□□□□ -0.22
SNORD55-201ENST00000581525 CUL9Q8IWT3 2517 aa13.65□□□□□ -0.22
SNORD55-201ENST00000581525 LOC730098B7Z3J9 87 aa13.65□□□□□ -0.22
SNORD55-201ENST00000581525 DLL1O00548 723 aa13.65□□□□□ -0.22
SNORD55-201ENST00000581525 PRPF40AO75400 957 aaKnown RBP13.65□□□□□ -0.22
SNORD55-201ENST00000581525 RPL17P18621 184 aaKnown RBP13.65□□□□□ -0.22
SNORD55-201ENST00000581525 HOXA9P31269 272 aa13.65□□□□□ -0.22
SNORD55-201ENST00000581525 OR1D2P34982 312 aa13.65□□□□□ -0.22
SNORD55-201ENST00000581525 PNPLA4P41247 253 aa13.65□□□□□ -0.22
SNORD55-201ENST00000581525 MTHFRP42898 656 aa13.65□□□□□ -0.22
SNORD55-201ENST00000581525 CYP24A1Q07973 514 aa13.65□□□□□ -0.22
SNORD55-201ENST00000581525 ZNF658Q5TYW1 1059 aaPredicted RBP13.65□□□□□ -0.22
SNORD55-201ENST00000581525 TPGS2Q68CL5 300 aa13.65□□□□□ -0.22
SNORD55-201ENST00000581525 CENPPQ6IPU0 288 aa13.65□□□□□ -0.22
SNORD55-201ENST00000581525 ELMSAN1Q6PJG2 1045 aa13.65□□□□□ -0.22
SNORD55-201ENST00000581525 KREMEN2Q8NCW0 462 aa13.65□□□□□ -0.22
SNORD55-201ENST00000581525 ZNF461Q8TAF7 563 aa13.65□□□□□ -0.22
SNORD55-201ENST00000581525 PARD3BQ8TEW8 1205 aa13.65□□□□□ -0.22
SNORD55-201ENST00000581525 ZNF707Q96C28 371 aaPredicted RBP13.65□□□□□ -0.22
SNORD55-201ENST00000581525 SENP8Q96LD8 212 aa13.65□□□□□ -0.22
SNORD55-201ENST00000581525 CD320Q9NPF0 282 aa13.65□□□□□ -0.22
SNORD55-201ENST00000581525 MAN1C1Q9NR34 630 aa13.65□□□□□ -0.22
SNORD55-201ENST00000581525 RMND1Q9NWS8 449 aa13.65□□□□□ -0.22
SNORD55-201ENST00000581525 GDAP2Q9NXN4 497 aa13.65□□□□□ -0.22
SNORD55-201ENST00000581525 SIX4Q9UIU6 781 aa13.65□□□□□ -0.22
SNORD55-201ENST00000581525 HOOK1Q9UJC3 728 aaKnown RBP13.65□□□□□ -0.22
SNORD55-201ENST00000581525 ITGA11Q9UKX5 1188 aa13.65□□□□□ -0.22
SNORD55-201ENST00000581525 ARHGEF37A1IGU5 675 aa13.64□□□□□ -0.23
SNORD55-201ENST00000581525 ZMYND10O75800 440 aa13.64□□□□□ -0.23
SNORD55-201ENST00000581525 SMC2O95347 1197 aa13.64□□□□□ -0.23
SNORD55-201ENST00000581525 HNRNPA1P09651 372 aaKnown RBP eCLIP13.64□□□□□ -0.23
SNORD55-201ENST00000581525 FAM163BP0C2L3 166 aa13.64□□□□□ -0.23
SNORD55-201ENST00000581525 ATF2P15336 505 aa13.64□□□□□ -0.23
SNORD55-201ENST00000581525 MCM4P33991 863 aa13.64□□□□□ -0.23
SNORD55-201ENST00000581525 CA8P35219 290 aa13.64□□□□□ -0.23
SNORD55-201ENST00000581525 TAF6P49848 677 aa13.64□□□□□ -0.23
SNORD55-201ENST00000581525 CLUL1Q15846 466 aa13.64□□□□□ -0.23
SNORD55-201ENST00000581525 DUOXA2Q1HG44 320 aa13.64□□□□□ -0.23
SNORD55-201ENST00000581525 EDRF1Q3B7T1 1238 aa13.64□□□□□ -0.23
SNORD55-201ENST00000581525 SCARA3Q6AZY7 606 aa13.64□□□□□ -0.23
SNORD55-201ENST00000581525 CES5AQ6NT32 575 aa13.64□□□□□ -0.23
SNORD55-201ENST00000581525 FOXR2Q6PJQ5 311 aa13.64□□□□□ -0.23
SNORD55-201ENST00000581525 PALB2Q86YC2 1186 aa13.64□□□□□ -0.23
SNORD55-201ENST00000581525 ZC3H3Q8IXZ2 948 aaKnown RBP13.64□□□□□ -0.23
SNORD55-201ENST00000581525 C12orf76Q8N812 135 aaPredicted RBP13.64□□□□□ -0.23
SNORD55-201ENST00000581525 OR5B17Q8NGF7 314 aa13.64□□□□□ -0.23
SNORD55-201ENST00000581525 SPATA18Q8TC71 538 aa13.64□□□□□ -0.23
SNORD55-201ENST00000581525 TMC2Q8TDI7 906 aa13.64□□□□□ -0.23
SNORD55-201ENST00000581525 ZNF516Q92618 1163 aa13.64□□□□□ -0.23
SNORD55-201ENST00000581525 RIPOR3Q96MK2 946 aa13.64□□□□□ -0.23
SNORD55-201ENST00000581525 IPO9Q96P70 1041 aaKnown RBP13.64□□□□□ -0.23
SNORD55-201ENST00000581525 FBXL5Q9UKA1 691 aa13.64□□□□□ -0.23
SNORD55-201ENST00000581525 CDY1Q9Y6F8 540 aa13.64□□□□□ -0.23
SNORD55-201ENST00000581525 PTPRJQ12913 1337 aa13.64□□□□□ -0.23
SNORD55-201ENST00000581525 KPNA7A9QM74 516 aa13.63□□□□□ -0.23
SNORD55-201ENST00000581525 TNFRSF10AO00220 468 aa13.63□□□□□ -0.23
SNORD55-201ENST00000581525 CALUO43852 315 aaPredicted RBP13.63□□□□□ -0.23
SNORD55-201ENST00000581525 EXOC3O60645 756 aa13.63□□□□□ -0.23
SNORD55-201ENST00000581525 STAU1O95793 577 aaKnown RBP13.63□□□□□ -0.23
SNORD55-201ENST00000581525 PRCPP42785 496 aa13.63□□□□□ -0.23
SNORD55-201ENST00000581525 CYP2J2P51589 502 aa13.63□□□□□ -0.23
SNORD55-201ENST00000581525 AP3M2P53677 418 aa13.63□□□□□ -0.23
SNORD55-201ENST00000581525 RBP5P82980 135 aa13.63□□□□□ -0.23
SNORD55-201ENST00000581525 TFAMQ00059 246 aaKnown RBP13.63□□□□□ -0.23
SNORD55-201ENST00000581525 ROR1Q01973 937 aa13.63□□□□□ -0.23
SNORD55-201ENST00000581525 YWHAHQ04917 246 aaPredicted RBP13.63□□□□□ -0.23
SNORD55-201ENST00000581525 ATAT1Q5SQI0 421 aa13.63□□□□□ -0.23
SNORD55-201ENST00000581525 RARS2Q5T160 578 aaKnown RBP13.63□□□□□ -0.23
SNORD55-201ENST00000581525 ZNF280DQ6N043 979 aa13.63□□□□□ -0.23
SNORD55-201ENST00000581525 DPH6Q7L8W6 267 aa13.63□□□□□ -0.23
SNORD55-201ENST00000581525 TRAPPC11Q7Z392 1133 aa13.63□□□□□ -0.23
SNORD55-201ENST00000581525 TCEAL8Q8IYN2 117 aa13.63□□□□□ -0.23
SNORD55-201ENST00000581525 ADSSL1Q8N142 457 aa13.63□□□□□ -0.23
SNORD55-201ENST00000581525 CSGALNACT2Q8N6G5 542 aa13.63□□□□□ -0.23
SNORD55-201ENST00000581525 RDH13Q8NBN7 331 aa13.63□□□□□ -0.23
SNORD55-201ENST00000581525 PLEKHO2Q8TD55 490 aa13.63□□□□□ -0.23
SNORD55-201ENST00000581525 SMARCE1Q969G3 411 aa13.63□□□□□ -0.23
SNORD55-201ENST00000581525 ANKRD36BP1Q96IX9 119 aa13.63□□□□□ -0.23
SNORD55-201ENST00000581525 NECAB3Q96P71 396 aaPredicted RBP13.63□□□□□ -0.23
SNORD55-201ENST00000581525 POP1Q99575 1024 aaKnown RBP13.63□□□□□ -0.23
SNORD55-201ENST00000581525 CGRRF1Q99675 332 aa13.63□□□□□ -0.23
SNORD55-201ENST00000581525 PRKD2Q9BZL6 878 aa13.63□□□□□ -0.23
SNORD55-201ENST00000581525 DSEQ9UL01 958 aa13.63□□□□□ -0.23
SNORD55-201ENST00000581525 AGAP1Q9UPQ3 857 aa13.63□□□□□ -0.23
SNORD55-201ENST00000581525 USTQ9Y2C2 406 aa13.63□□□□□ -0.23
SNORD55-201ENST00000581525 MTCL1Q9Y4B5 1905 aaKnown RBP13.62□□□□□ -0.23
SNORD55-201ENST00000581525 CCDC195A0A1B0GUA6 201 aa13.62□□□□□ -0.23
SNORD55-201ENST00000581525 WDR27A2RRH5 827 aa13.62□□□□□ -0.23
SNORD55-201ENST00000581525 OR6C75A6NL08 312 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms