RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 ANKRD7Q92527 254 aa15.86■□□□□ 0.13
CDK5RAP3-218ENST00000580391 UBXN4Q92575 508 aa15.86■□□□□ 0.13
CDK5RAP3-218ENST00000580391 GOLGA1Q92805 767 aa15.86■□□□□ 0.13
CDK5RAP3-218ENST00000580391 ZNF653Q96CK0 615 aa15.86■□□□□ 0.13
CDK5RAP3-218ENST00000580391 MMS19Q96T76 1030 aa15.86■□□□□ 0.13
CDK5RAP3-218ENST00000580391 BCO2Q9BYV7 579 aa15.86■□□□□ 0.13
CDK5RAP3-218ENST00000580391 SMYD3Q9H7B4 428 aa15.86■□□□□ 0.13
CDK5RAP3-218ENST00000580391 TUBGCP4Q9UGJ1 667 aa15.86■□□□□ 0.13
CDK5RAP3-218ENST00000580391 ITGA11Q9UKX5 1188 aa15.86■□□□□ 0.13
CDK5RAP3-218ENST00000580391 AGAP1Q9UPQ3 857 aa15.86■□□□□ 0.13
CDK5RAP3-218ENST00000580391 BUB1BO60566 1050 aaPredicted RBP15.85■□□□□ 0.13
CDK5RAP3-218ENST00000580391 FKTNO75072 461 aa15.85■□□□□ 0.13
CDK5RAP3-218ENST00000580391 TCP1P17987 556 aaKnown RBP15.85■□□□□ 0.13
CDK5RAP3-218ENST00000580391 YARSP54577 528 aaKnown RBP15.85■□□□□ 0.13
CDK5RAP3-218ENST00000580391 GPC5P78333 572 aa15.85■□□□□ 0.13
CDK5RAP3-218ENST00000580391 NAA35Q5VZE5 725 aa15.85■□□□□ 0.13
CDK5RAP3-218ENST00000580391 ACAD10Q6JQN1 1059 aa15.85■□□□□ 0.13
CDK5RAP3-218ENST00000580391 NT5DC4Q86YG4 428 aa15.85■□□□□ 0.13
CDK5RAP3-218ENST00000580391 PCSK9Q8NBP7 692 aaKnown RBP15.85■□□□□ 0.13
CDK5RAP3-218ENST00000580391 SENP6Q9GZR1 1112 aaPredicted RBP15.85■□□□□ 0.13
CDK5RAP3-218ENST00000580391 PLEKHA5Q9HAU0 1116 aa15.85■□□□□ 0.13
CDK5RAP3-218ENST00000580391 EHD2Q9NZN4 543 aa15.85■□□□□ 0.13
CDK5RAP3-218ENST00000580391 CTTNBP2NLQ9P2B4 639 aa15.85■□□□□ 0.13
CDK5RAP3-218ENST00000580391 TSKSQ9UJT2 592 aa15.85■□□□□ 0.13
CDK5RAP3-218ENST00000580391 CTAGE15A4D2H0 777 aa15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 CHRNA1P02708 482 aa15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 CYP1A1P04798 512 aaPredicted RBP15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 CTAGE8P0CG41 777 aa15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 PRLRP16471 622 aa15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 BRD2P25440 801 aaKnown RBP15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 CDH8P55286 799 aa15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 MGAT3Q09327 533 aa15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 SLFN11Q7Z7L1 901 aa15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 DAAM2Q86T65 1068 aa15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 RNF180Q86T96 592 aa15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 RSPH3Q86UC2 560 aa15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 CTAGE6Q86UF2 777 aa15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 CREG2Q8IUH2 290 aa15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 CTAGE4Q8IX94 777 aa15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 RHOT2Q8IXI1 618 aa15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 CAGE1Q8TC20 777 aa15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 CYFIP2Q96F07 1278 aa15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 HPDLQ96IR7 371 aa15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 EPC1Q9H2F5 836 aa15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 PDCL3Q9H2J4 239 aa15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 RNF39Q9H2S5 420 aa15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 VRTNQ9H8Y1 702 aa15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 SMARCAL1Q9NZC9 954 aa15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 CNTN3Q9P232 1028 aa15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 PPEF2O14830 753 aa15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 GNRH1P01148 92 aa15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 ATICP31939 592 aa15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 NOMO3P69849 1222 aa15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 CENPCQ03188 943 aa15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 PTGISQ16647 500 aa15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 TWF2Q6IBS0 349 aaKnown RBP15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 SMG8Q8ND04 991 aaKnown RBP15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 CPA5Q8WXQ8 436 aa15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 C18orf25Q96B23 403 aaPredicted RBP15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 ZSWIM1Q9BR11 485 aa15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 OSBPL7Q9BZF2 842 aa15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 KLK14Q9P0G3 267 aa15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 HMGXB4Q9UGU5 601 aa15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 GTF3C4Q9UKN8 822 aa15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 DERAQ9Y315 318 aa15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 IPPQ9Y573 584 aa15.84■□□□□ 0.13
CDK5RAP3-218ENST00000580391 RPS6KA5O75582 802 aa15.83■□□□□ 0.12
CDK5RAP3-218ENST00000580391 KIF4AO95239 1232 aa15.83■□□□□ 0.12
CDK5RAP3-218ENST00000580391 ACLYP53396 1101 aa15.83■□□□□ 0.12
CDK5RAP3-218ENST00000580391 RBM10P98175 930 aaKnown RBP15.83■□□□□ 0.12
CDK5RAP3-218ENST00000580391 CKAP4Q07065 602 aaKnown RBP15.83■□□□□ 0.12
CDK5RAP3-218ENST00000580391 ITGA7Q13683 1181 aa15.83■□□□□ 0.12
CDK5RAP3-218ENST00000580391 ALKAL1Q6UXT8 129 aa15.83■□□□□ 0.12
CDK5RAP3-218ENST00000580391 PEX26Q7Z412 305 aa15.83■□□□□ 0.12
CDK5RAP3-218ENST00000580391 NT5DC3Q86UY8 548 aa15.83■□□□□ 0.12
CDK5RAP3-218ENST00000580391 NOA1Q8NC60 698 aaKnown RBP15.83■□□□□ 0.12
CDK5RAP3-218ENST00000580391 ZNF606Q8WXB4 792 aa15.83■□□□□ 0.12
CDK5RAP3-218ENST00000580391 TRMT13Q9NUP7 481 aaKnown RBP15.83■□□□□ 0.12
CDK5RAP3-218ENST00000580391 PARP2Q9UGN5 583 aa15.83■□□□□ 0.12
CDK5RAP3-218ENST00000580391 STXBP5LQ9Y2K9 1186 aa15.83■□□□□ 0.12
CDK5RAP3-218ENST00000580391 CYP1A2P05177 515 aa15.82■□□□□ 0.12
CDK5RAP3-218ENST00000580391 ZSCAN20P17040 1043 aaPredicted RBP15.82■□□□□ 0.12
CDK5RAP3-218ENST00000580391 THPOP40225 353 aa15.82■□□□□ 0.12
CDK5RAP3-218ENST00000580391 HADHBP55084 474 aaKnown RBP15.82■□□□□ 0.12
CDK5RAP3-218ENST00000580391 YWHAEP62258 255 aaKnown RBP15.82■□□□□ 0.12
CDK5RAP3-218ENST00000580391 RBP5P82980 135 aa15.82■□□□□ 0.12
CDK5RAP3-218ENST00000580391 ORC1Q13415 861 aa15.82■□□□□ 0.12
CDK5RAP3-218ENST00000580391 TCEAL1Q15170 157 aa15.82■□□□□ 0.12
CDK5RAP3-218ENST00000580391 ZBTB6Q15916 424 aa15.82■□□□□ 0.12
CDK5RAP3-218ENST00000580391 C2CD6Q53TS8 623 aa15.82■□□□□ 0.12
CDK5RAP3-218ENST00000580391 RPAINQ86UA6 219 aa15.82■□□□□ 0.12
CDK5RAP3-218ENST00000580391 SYCE1Q8N0S2 351 aa15.82■□□□□ 0.12
CDK5RAP3-218ENST00000580391 ARRDC4Q8NCT1 418 aa15.82■□□□□ 0.12
CDK5RAP3-218ENST00000580391 SLAIN1Q8ND83 568 aa15.82■□□□□ 0.12
CDK5RAP3-218ENST00000580391 TWNKQ96RR1 684 aa15.82■□□□□ 0.12
CDK5RAP3-218ENST00000580391 NUP85Q9BW27 656 aa15.82■□□□□ 0.12
CDK5RAP3-218ENST00000580391 CNOT8Q9UFF9 292 aaKnown RBP15.82■□□□□ 0.12
CDK5RAP3-218ENST00000580391 ST3GAL5Q9UNP4 418 aa15.82■□□□□ 0.12
CDK5RAP3-218ENST00000580391 PTCH2Q9Y6C5 1203 aa15.82■□□□□ 0.12
CDK5RAP3-218ENST00000580391 NSFP46459 744 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms