RNA–Protein interactions for RNA: ENST00000580108.1

DDX42-211, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-211ENST00000580108 PGBD1Q96JS3 809 aa4.59□□□□□ -1.67
DDX42-211ENST00000580108 RNPC3Q96LT9 517 aaKnown RBP4.59□□□□□ -1.67
DDX42-211ENST00000580108 GLT1D1Q96MS3 346 aa4.59□□□□□ -1.67
DDX42-211ENST00000580108 UIMC1Q96RL1 719 aa4.59□□□□□ -1.67
DDX42-211ENST00000580108 RMDN3Q96TC7 470 aa4.59□□□□□ -1.67
DDX42-211ENST00000580108 TM9SF2Q99805 663 aa4.59□□□□□ -1.67
DDX42-211ENST00000580108 SPATA25Q9BR10 227 aa4.59□□□□□ -1.67
DDX42-211ENST00000580108 NOL6Q9H6R4 1146 aaKnown RBP4.59□□□□□ -1.67
DDX42-211ENST00000580108 RXFP1Q9HBX9 757 aa4.59□□□□□ -1.67
DDX42-211ENST00000580108 VTA1Q9NP79 307 aa4.59□□□□□ -1.67
DDX42-211ENST00000580108 PXMP2Q9NR77 195 aa4.59□□□□□ -1.67
DDX42-211ENST00000580108 MTMR10Q9NXD2 777 aa4.59□□□□□ -1.67
DDX42-211ENST00000580108 PPT2Q9UMR5 302 aa4.59□□□□□ -1.67
DDX42-211ENST00000580108 COL4A4P53420 1690 aaPredicted RBP4.58□□□□□ -1.68
DDX42-211ENST00000580108 ELP1O95163 1332 aa4.58□□□□□ -1.68
DDX42-211ENST00000580108 A0A1W2PPC1 479 aa4.58□□□□□ -1.68
DDX42-211ENST00000580108 ZBTB5O15062 677 aa4.58□□□□□ -1.68
DDX42-211ENST00000580108 TIMP1P01033 207 aa4.58□□□□□ -1.68
DDX42-211ENST00000580108 ASGR2P07307 311 aa4.58□□□□□ -1.68
DDX42-211ENST00000580108 GLI4P10075 376 aa4.58□□□□□ -1.68
DDX42-211ENST00000580108 MYOGP15173 224 aa4.58□□□□□ -1.68
DDX42-211ENST00000580108 HSD17B4P51659 736 aa4.58□□□□□ -1.68
DDX42-211ENST00000580108 RABGGTBP53611 331 aa4.58□□□□□ -1.68
DDX42-211ENST00000580108 CORO7P57737 925 aa4.58□□□□□ -1.68
DDX42-211ENST00000580108 NKX3-2P78367 333 aa4.58□□□□□ -1.68
DDX42-211ENST00000580108 PURAQ00577 322 aaKnown RBP4.58□□□□□ -1.68
DDX42-211ENST00000580108 SP2Q02086 613 aa4.58□□□□□ -1.68
DDX42-211ENST00000580108 PLP2Q04941 152 aa4.58□□□□□ -1.68
DDX42-211ENST00000580108 FPGSQ05932 587 aa4.58□□□□□ -1.68
DDX42-211ENST00000580108 TRDNQ13061 729 aa4.58□□□□□ -1.68
DDX42-211ENST00000580108 PPP2R5BQ15173 497 aa4.58□□□□□ -1.68
DDX42-211ENST00000580108 NECTIN1Q15223 517 aa4.58□□□□□ -1.68
DDX42-211ENST00000580108 TARBP2Q15633 366 aaKnown RBP4.58□□□□□ -1.68
DDX42-211ENST00000580108 ARHGEF16Q5VV41 709 aa4.58□□□□□ -1.68
DDX42-211ENST00000580108 CCDC62Q6P9F0 684 aa4.58□□□□□ -1.68
DDX42-211ENST00000580108 USP17L6PQ6QN14 398 aa4.58□□□□□ -1.68
DDX42-211ENST00000580108 ZNF365Q70YC5 407 aa4.58□□□□□ -1.68
DDX42-211ENST00000580108 TMCO2Q7Z6W1 182 aaPredicted RBP4.58□□□□□ -1.68
DDX42-211ENST00000580108 DEFB128Q7Z7B8 93 aa4.58□□□□□ -1.68
DDX42-211ENST00000580108 MICU3Q86XE3 530 aa4.58□□□□□ -1.68
DDX42-211ENST00000580108 TICAM2Q86XR7 235 aa4.58□□□□□ -1.68
DDX42-211ENST00000580108 SLC43A3Q8NBI5 491 aa4.58□□□□□ -1.68
DDX42-211ENST00000580108 TMEM87AQ8NBN3 555 aa4.58□□□□□ -1.68
DDX42-211ENST00000580108 PCSK9Q8NBP7 692 aaKnown RBP4.58□□□□□ -1.68
DDX42-211ENST00000580108 RBBP8NLQ8NC74 664 aaPredicted RBP4.58□□□□□ -1.68
DDX42-211ENST00000580108 KAT2BQ92831 832 aa4.58□□□□□ -1.68
DDX42-211ENST00000580108 FERD3LQ96RJ6 166 aa4.58□□□□□ -1.68
DDX42-211ENST00000580108 CTAGE1Q96RT6 745 aa4.58□□□□□ -1.68
DDX42-211ENST00000580108 PDCD2LQ9BRP1 358 aa4.58□□□□□ -1.68
DDX42-211ENST00000580108 ALG1Q9BT22 464 aa4.58□□□□□ -1.68
DDX42-211ENST00000580108 ALDH8A1Q9H2A2 487 aaPredicted RBP4.58□□□□□ -1.68
DDX42-211ENST00000580108 HIPK3Q9H422 1215 aa4.58□□□□□ -1.68
DDX42-211ENST00000580108 RIOX1Q9H6W3 641 aa4.58□□□□□ -1.68
DDX42-211ENST00000580108 SPC25Q9HBM1 224 aa4.58□□□□□ -1.68
DDX42-211ENST00000580108 ADD3Q9UEY8 706 aaKnown RBP4.58□□□□□ -1.68
DDX42-211ENST00000580108 MRPL11Q9Y3B7 192 aaKnown RBP4.58□□□□□ -1.68
DDX42-211ENST00000580108 PCDHGB7Q9Y5F8 929 aa4.58□□□□□ -1.68
DDX42-211ENST00000580108 PCDHA1Q9Y5I3 950 aa4.58□□□□□ -1.68
DDX42-211ENST00000580108 PMF1-BGLAPU3KQ54 211 aa4.58□□□□□ -1.68
DDX42-211ENST00000580108 WDR81Q562E7 1941 aa4.58□□□□□ -1.68
DDX42-211ENST00000580108 MICAL3Q7RTP6 2002 aa4.57□□□□□ -1.68
DDX42-211ENST00000580108 KAT6AQ92794 2004 aa4.57□□□□□ -1.68
DDX42-211ENST00000580108 ATG2AQ2TAZ0 1938 aa4.57□□□□□ -1.68
DDX42-211ENST00000580108 SH3D21A4FU49 640 aa4.57□□□□□ -1.68
DDX42-211ENST00000580108 CDC45O75419 566 aa4.57□□□□□ -1.68
DDX42-211ENST00000580108 GGPS1O95749 300 aa4.57□□□□□ -1.68
DDX42-211ENST00000580108 GH1P01241 217 aa4.57□□□□□ -1.68
DDX42-211ENST00000580108 MMP3P08254 477 aa4.57□□□□□ -1.68
DDX42-211ENST00000580108 IMPDH2P12268 514 aa4.57□□□□□ -1.68
DDX42-211ENST00000580108 UBA1P22314 1058 aaKnown RBP4.57□□□□□ -1.68
DDX42-211ENST00000580108 GUCY2CP25092 1073 aa4.57□□□□□ -1.68
DDX42-211ENST00000580108 PMLP29590 882 aa4.57□□□□□ -1.68
DDX42-211ENST00000580108 NOP2P46087 812 aaKnown RBP4.57□□□□□ -1.68
DDX42-211ENST00000580108 MRPS9P82933 396 aaKnown RBP4.57□□□□□ -1.68
DDX42-211ENST00000580108 SP4Q02446 784 aa4.57□□□□□ -1.68
DDX42-211ENST00000580108 PGM5Q15124 567 aa4.57□□□□□ -1.68
DDX42-211ENST00000580108 CCDC178Q5BJE1 867 aa4.57□□□□□ -1.68
DDX42-211ENST00000580108 ZFYVE27Q5T4F4 411 aa4.57□□□□□ -1.68
DDX42-211ENST00000580108 NT5DC1Q5TFE4 455 aa4.57□□□□□ -1.68
DDX42-211ENST00000580108 ERICH6BQ5W0A0 696 aa4.57□□□□□ -1.68
DDX42-211ENST00000580108 MFSD5Q6N075 450 aa4.57□□□□□ -1.68
DDX42-211ENST00000580108 CASC1Q6TDU7 716 aa4.57□□□□□ -1.68
DDX42-211ENST00000580108 CENPQQ7L2Z9 268 aaPredicted RBP4.57□□□□□ -1.68
DDX42-211ENST00000580108 OTOP2Q7RTS6 562 aa4.57□□□□□ -1.68
DDX42-211ENST00000580108 CATIPQ7Z7H3 387 aa4.57□□□□□ -1.68
DDX42-211ENST00000580108 FERMT3Q86UX7 667 aa4.57□□□□□ -1.68
DDX42-211ENST00000580108 USP38Q8NB14 1042 aa4.57□□□□□ -1.68
DDX42-211ENST00000580108 DNERQ8NFT8 737 aa4.57□□□□□ -1.68
DDX42-211ENST00000580108 NSUN6Q8TEA1 469 aaKnown RBP4.57□□□□□ -1.68
DDX42-211ENST00000580108 SCFD2Q8WU76 684 aa4.57□□□□□ -1.68
DDX42-211ENST00000580108 ZBTB10Q96DT7 871 aa4.57□□□□□ -1.68
DDX42-211ENST00000580108 CCDC136Q96JN2 1154 aa4.57□□□□□ -1.68
DDX42-211ENST00000580108 CDX2Q99626 313 aaPredicted RBP4.57□□□□□ -1.68
DDX42-211ENST00000580108 MTG1Q9BT17 334 aaPredicted RBP4.57□□□□□ -1.68
DDX42-211ENST00000580108 AMNQ9BXJ7 453 aa4.57□□□□□ -1.68
DDX42-211ENST00000580108 RNF38Q9H0F5 515 aa4.57□□□□□ -1.68
DDX42-211ENST00000580108 NKX2-4Q9H2Z4 354 aa4.57□□□□□ -1.68
DDX42-211ENST00000580108 TMEM260Q9NX78 707 aa4.57□□□□□ -1.68
DDX42-211ENST00000580108 HDAC6Q9UBN7 1215 aa4.57□□□□□ -1.68
DDX42-211ENST00000580108 DDX41Q9UJV9 622 aaKnown RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms