RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 ABHD10Q9NUJ1 306 aa10.76□□□□□ -0.69
MSI2-209ENST00000579483 EVA1BQ9NVM1 165 aa10.76□□□□□ -0.69
MSI2-209ENST00000579483 NFU1Q9UMS0 254 aa10.76□□□□□ -0.69
MSI2-209ENST00000579483 SLC30A1Q9Y6M5 507 aa10.76□□□□□ -0.69
MSI2-209ENST00000579483 NVLO15381 856 aaKnown RBP10.75□□□□□ -0.69
MSI2-209ENST00000579483 DNAJC6O75061 913 aa10.75□□□□□ -0.69
MSI2-209ENST00000579483 PABPC1LQ4VXU2 614 aaKnown RBP10.75□□□□□ -0.69
MSI2-209ENST00000579483 CELF3Q5SZQ8 465 aaKnown RBP10.75□□□□□ -0.69
MSI2-209ENST00000579483 SLC30A10Q6XR72 485 aa10.75□□□□□ -0.69
MSI2-209ENST00000579483 NLGN2Q8NFZ4 835 aa10.75□□□□□ -0.69
MSI2-209ENST00000579483 CGRRF1Q99675 332 aa10.75□□□□□ -0.69
MSI2-209ENST00000579483 RWDD3Q9Y3V2 267 aa10.75□□□□□ -0.69
MSI2-209ENST00000579483 XRN1Q8IZH2 1706 aaKnown RBP10.75□□□□□ -0.69
MSI2-209ENST00000579483 EXOC1LA0A1B0GW35 172 aa10.75□□□□□ -0.69
MSI2-209ENST00000579483 CASP1P29466 404 aa10.75□□□□□ -0.69
MSI2-209ENST00000579483 CTCFP49711 727 aaPredicted RBP10.75□□□□□ -0.69
MSI2-209ENST00000579483 APLP1P51693 650 aa10.75□□□□□ -0.69
MSI2-209ENST00000579483 RHBDL3P58872 404 aa10.75□□□□□ -0.69
MSI2-209ENST00000579483 PPIGQ13427 754 aaKnown RBP eCLIP10.75□□□□□ -0.692e-23■□□□□ 11.3
MSI2-209ENST00000579483 PDK1Q15118 436 aa10.75□□□□□ -0.69
MSI2-209ENST00000579483 CCDC144BQ3MJ40 725 aa10.75□□□□□ -0.69
MSI2-209ENST00000579483 WHAMMQ8TF30 809 aa10.75□□□□□ -0.69
MSI2-209ENST00000579483 ALKBH8Q96BT7 664 aaKnown RBP10.75□□□□□ -0.69
MSI2-209ENST00000579483 DEFB118Q96PH6 123 aa10.75□□□□□ -0.69
MSI2-209ENST00000579483 FAM49BQ9NUQ9 324 aa10.75□□□□□ -0.69
MSI2-209ENST00000579483 COL3A1P02461 1466 aaPredicted RBP10.75□□□□□ -0.69
MSI2-209ENST00000579483 RGS7P49802 495 aa10.75□□□□□ -0.69
MSI2-209ENST00000579483 BCAT1P54687 386 aa10.75□□□□□ -0.69
MSI2-209ENST00000579483 KLHL38Q2WGJ6 581 aa10.75□□□□□ -0.69
MSI2-209ENST00000579483 FBXO47Q5MNV8 452 aa10.75□□□□□ -0.69
MSI2-209ENST00000579483 TTC19Q6DKK2 380 aaPredicted RBP10.75□□□□□ -0.69
MSI2-209ENST00000579483 ADGRA1Q86SQ6 560 aa10.75□□□□□ -0.69
MSI2-209ENST00000579483 VGLL2Q8N8G2 317 aa10.75□□□□□ -0.69
MSI2-209ENST00000579483 PPHLN1Q8NEY8 458 aaKnown RBP10.75□□□□□ -0.69
MSI2-209ENST00000579483 OR6P1Q8NGX9 317 aa10.75□□□□□ -0.69
MSI2-209ENST00000579483 CYP4F11Q9HBI6 524 aa10.75□□□□□ -0.69
MSI2-209ENST00000579483 RRN3Q9NYV6 651 aa10.75□□□□□ -0.69
MSI2-209ENST00000579483 GOLGA8MH3BSY2 632 aa10.75□□□□□ -0.69
MSI2-209ENST00000579483 SLC9A3R1O14745 358 aaPredicted RBP10.75□□□□□ -0.69
MSI2-209ENST00000579483 CYP3A4P08684 503 aa10.75□□□□□ -0.69
MSI2-209ENST00000579483 FSTL1Q12841 308 aa10.75□□□□□ -0.69
MSI2-209ENST00000579483 DPYDQ12882 1025 aa10.75□□□□□ -0.69
MSI2-209ENST00000579483 SYTL3Q4VX76 610 aa10.75□□□□□ -0.69
MSI2-209ENST00000579483 OVOS1Q6IE37 1185 aa10.75□□□□□ -0.69
MSI2-209ENST00000579483 TRIM67Q6ZTA4 783 aa10.75□□□□□ -0.69
MSI2-209ENST00000579483 UNC45BQ8IWX7 931 aa10.75□□□□□ -0.69
MSI2-209ENST00000579483 RNF25Q96BH1 459 aaPredicted RBP10.75□□□□□ -0.69
MSI2-209ENST00000579483 SDCCAG3Q96C92 435 aa10.75□□□□□ -0.69
MSI2-209ENST00000579483 XPO6Q96QU8 1125 aaKnown RBP10.75□□□□□ -0.69
MSI2-209ENST00000579483 TMEM60Q9H2L4 133 aa10.75□□□□□ -0.69
MSI2-209ENST00000579483 FAM96AQ9H5X1 160 aa10.75□□□□□ -0.69
MSI2-209ENST00000579483 PDE11AQ9HCR9 933 aa10.75□□□□□ -0.69
MSI2-209ENST00000579483 AGPAT3Q9NRZ7 376 aa10.75□□□□□ -0.69
MSI2-209ENST00000579483 USH1CQ9Y6N9 552 aa10.75□□□□□ -0.69
MSI2-209ENST00000579483 KPNA7A9QM74 516 aa10.74□□□□□ -0.69
MSI2-209ENST00000579483 ACKR2O00590 384 aa10.74□□□□□ -0.69
MSI2-209ENST00000579483 RTN3O95197 1032 aaPredicted RBP10.74□□□□□ -0.69
MSI2-209ENST00000579483 PRR29P0C7W0 189 aa10.74□□□□□ -0.69
MSI2-209ENST00000579483 NCAM1P13591 858 aa10.74□□□□□ -0.69
MSI2-209ENST00000579483 CCT5P48643 541 aa10.74□□□□□ -0.69
MSI2-209ENST00000579483 PHEXP78562 749 aa10.74□□□□□ -0.69
MSI2-209ENST00000579483 KIRREL3Q8IZU9 778 aa10.74□□□□□ -0.69
MSI2-209ENST00000579483 SYNDIG1Q9H7V2 258 aa10.74□□□□□ -0.69
MSI2-209ENST00000579483 TLR8Q9NR97 1041 aaKnown RBP10.74□□□□□ -0.69
MSI2-209ENST00000579483 OLFML3Q9NRN5 406 aa10.74□□□□□ -0.69
MSI2-209ENST00000579483 MRPL17Q9NRX2 175 aaKnown RBP10.74□□□□□ -0.69
MSI2-209ENST00000579483 CYP39A1Q9NYL5 469 aa10.74□□□□□ -0.69
MSI2-209ENST00000579483 LIMA1Q9UHB6 759 aaKnown RBP10.74□□□□□ -0.69
MSI2-209ENST00000579483 ONECUT3O60422 494 aaPredicted RBP10.74□□□□□ -0.69
MSI2-209ENST00000579483 MYO1DO94832 1006 aa10.74□□□□□ -0.69
MSI2-209ENST00000579483 HIST1H2AGP0C0S8 130 aaPredicted RBP10.74□□□□□ -0.69
MSI2-209ENST00000579483 HIST1H2ADP20671 130 aa10.74□□□□□ -0.69
MSI2-209ENST00000579483 GPD1P21695 349 aa10.74□□□□□ -0.69
MSI2-209ENST00000579483 CHRNA3P32297 505 aa10.74□□□□□ -0.69
MSI2-209ENST00000579483 BOLA3Q53S33 107 aa10.74□□□□□ -0.69
MSI2-209ENST00000579483 VSIG10LQ86VR7 867 aa10.74□□□□□ -0.69
MSI2-209ENST00000579483 OOSP2Q86WS3 158 aa10.74□□□□□ -0.69
MSI2-209ENST00000579483 MGARPQ8TDB4 240 aa10.74□□□□□ -0.69
MSI2-209ENST00000579483 HIST1H2AHQ96KK5 128 aa10.74□□□□□ -0.69
MSI2-209ENST00000579483 TSPAN18Q96SJ8 248 aa10.74□□□□□ -0.69
MSI2-209ENST00000579483 HIST1H2AJQ99878 128 aa10.74□□□□□ -0.69
MSI2-209ENST00000579483 H2AFJQ9BTM1 129 aa10.74□□□□□ -0.69
MSI2-209ENST00000579483 NDFIP2Q9NV92 336 aa10.74□□□□□ -0.69
MSI2-209ENST00000579483 ATRNO75882 1429 aa10.74□□□□□ -0.69
MSI2-209ENST00000579483 SETSIPP0DME0 302 aa10.74□□□□□ -0.69
MSI2-209ENST00000579483 MAP4P27816 1152 aaKnown RBP10.74□□□□□ -0.69
MSI2-209ENST00000579483 MNAT1P51948 309 aa10.74□□□□□ -0.69
MSI2-209ENST00000579483 PTK2BQ14289 1009 aa10.74□□□□□ -0.69
MSI2-209ENST00000579483 ZC2HC1CQ53FD0 456 aaPredicted RBP10.74□□□□□ -0.69
MSI2-209ENST00000579483 THEMIS2Q5TEJ8 643 aa10.74□□□□□ -0.69
MSI2-209ENST00000579483 ACRBPQ8NEB7 543 aa10.74□□□□□ -0.69
MSI2-209ENST00000579483 PPP1R13BQ96KQ4 1090 aa10.74□□□□□ -0.69
MSI2-209ENST00000579483 FMO2Q99518 471 aa10.74□□□□□ -0.69
MSI2-209ENST00000579483 ZNF518BQ9C0D4 1074 aa10.74□□□□□ -0.69
MSI2-209ENST00000579483 ABCF3Q9NUQ8 709 aa10.74□□□□□ -0.69
MSI2-209ENST00000579483 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.74□□□□□ -0.69
MSI2-209ENST00000579483 ESRRBO95718 433 aa10.74□□□□□ -0.69
MSI2-209ENST00000579483 TTC4O95801 387 aa10.74□□□□□ -0.69
MSI2-209ENST00000579483 ACADMP11310 421 aa10.74□□□□□ -0.69
MSI2-209ENST00000579483 CNTN2Q02246 1040 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms