RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 TRIM6Q9C030 488 aaPredicted RBP21.66■■□□□ 1.06
SMG8-203ENST00000578922 RNF216Q9NWF9 866 aaPredicted RBP21.66■■□□□ 1.06
SMG8-203ENST00000578922 PCDHB4Q9Y5E5 795 aa21.66■■□□□ 1.06
SMG8-203ENST00000578922 GRIN2DO15399 1336 aa21.66■■□□□ 1.06
SMG8-203ENST00000578922 RNF40O75150 1001 aa21.65■■□□□ 1.06
SMG8-203ENST00000578922 NKX3-2P78367 333 aa21.65■■□□□ 1.06
SMG8-203ENST00000578922 ZNF699Q32M78 642 aa21.65■■□□□ 1.06
SMG8-203ENST00000578922 DCAF4L1Q3SXM0 396 aa21.65■■□□□ 1.06
SMG8-203ENST00000578922 C1orf127Q8N9H9 656 aa21.65■■□□□ 1.06
SMG8-203ENST00000578922 NOX5Q96PH1 765 aa21.65■■□□□ 1.06
SMG8-203ENST00000578922 PCDHB18PQ96TA0 734 aa21.65■■□□□ 1.06
SMG8-203ENST00000578922 NXF3Q9H4D5 531 aaKnown RBP21.65■■□□□ 1.06
SMG8-203ENST00000578922 RNF14Q9UBS8 474 aa21.65■■□□□ 1.06
SMG8-203ENST00000578922 CDY2AQ9Y6F7 541 aa21.65■■□□□ 1.06
SMG8-203ENST00000578922 THSD7BQ9C0I4 1608 aa21.65■■□□□ 1.06
SMG8-203ENST00000578922 A0A0U1RQG5 324 aaPredicted RBP21.65■■□□□ 1.06
SMG8-203ENST00000578922 ITGB3P05106 788 aa21.65■■□□□ 1.06
SMG8-203ENST00000578922 CD58P19256 250 aa21.65■■□□□ 1.06
SMG8-203ENST00000578922 GRM5P41594 1212 aa21.65■■□□□ 1.06
SMG8-203ENST00000578922 GALCP54803 685 aa21.65■■□□□ 1.06
SMG8-203ENST00000578922 TMEM270Q6UE05 265 aa21.65■■□□□ 1.06
SMG8-203ENST00000578922 OSBPL9Q96SU4 736 aa21.65■■□□□ 1.06
SMG8-203ENST00000578922 SELENOOQ9BVL4 669 aa21.65■■□□□ 1.06
SMG8-203ENST00000578922 FAM204AQ9H8W3 233 aa21.65■■□□□ 1.06
SMG8-203ENST00000578922 SIX4Q9UIU6 781 aa21.65■■□□□ 1.06
SMG8-203ENST00000578922 ACO1P21399 889 aaKnown RBP21.64■■□□□ 1.06
SMG8-203ENST00000578922 MRPS6P82932 125 aaKnown RBP21.64■■□□□ 1.06
SMG8-203ENST00000578922 TMEM132DQ14C87 1099 aa21.64■■□□□ 1.06
SMG8-203ENST00000578922 SGSM1Q2NKQ1 1148 aa21.64■■□□□ 1.06
SMG8-203ENST00000578922 RNF180Q86T96 592 aa21.64■■□□□ 1.06
SMG8-203ENST00000578922 SPATA4Q8NEY3 305 aa21.64■■□□□ 1.06
SMG8-203ENST00000578922 PXYLP1Q8TE99 480 aa21.64■■□□□ 1.06
SMG8-203ENST00000578922 AENQ8WTP8 325 aaKnown RBP21.64■■□□□ 1.06
SMG8-203ENST00000578922 FAM81BQ96LP2 452 aa21.64■■□□□ 1.06
SMG8-203ENST00000578922 NXF1Q9UBU9 619 aaKnown RBP21.64■■□□□ 1.06
SMG8-203ENST00000578922 NOC2LQ9Y3T9 749 aaKnown RBP21.64■■□□□ 1.06
SMG8-203ENST00000578922 MYH10P35580 1976 aa21.64■■□□□ 1.05
SMG8-203ENST00000578922 M0QZ92 97 aa21.64■■□□□ 1.05
SMG8-203ENST00000578922 AKAP5P24588 427 aa21.64■■□□□ 1.05
SMG8-203ENST00000578922 NOP2P46087 812 aaKnown RBP21.64■■□□□ 1.05
SMG8-203ENST00000578922 FMO1Q01740 532 aa21.64■■□□□ 1.05
SMG8-203ENST00000578922 C2orf54Q08AI8 447 aa21.64■■□□□ 1.05
SMG8-203ENST00000578922 KYAT1Q16773 422 aa21.64■■□□□ 1.05
SMG8-203ENST00000578922 PCSK9Q8NBP7 692 aaKnown RBP21.64■■□□□ 1.05
SMG8-203ENST00000578922 KIF12Q96FN5 646 aa21.64■■□□□ 1.05
SMG8-203ENST00000578922 ASB7Q9H672 318 aa21.64■■□□□ 1.05
SMG8-203ENST00000578922 TBXAS1P24557 533 aaPredicted RBP21.63■■□□□ 1.05
SMG8-203ENST00000578922 CST5P28325 142 aaPredicted RBP21.63■■□□□ 1.05
SMG8-203ENST00000578922 SSTR3P32745 418 aaPredicted RBP21.63■■□□□ 1.05
SMG8-203ENST00000578922 PAFAH1B1P43034 410 aa21.63■■□□□ 1.05
SMG8-203ENST00000578922 PTGISQ16647 500 aa21.63■■□□□ 1.05
SMG8-203ENST00000578922 FAM228AQ86W67 206 aa21.63■■□□□ 1.05
SMG8-203ENST00000578922 XYLT2Q9H1B5 865 aa21.63■■□□□ 1.05
SMG8-203ENST00000578922 POLIQ9UNA4 740 aa21.63■■□□□ 1.05
SMG8-203ENST00000578922 PALMO75781 387 aa21.63■■□□□ 1.05
SMG8-203ENST00000578922 MYCP01106 439 aaPredicted RBP21.63■■□□□ 1.05
SMG8-203ENST00000578922 GNRH1P01148 92 aa21.63■■□□□ 1.05
SMG8-203ENST00000578922 WEE2P0C1S8 567 aa21.63■■□□□ 1.05
SMG8-203ENST00000578922 GLE1Q53GS7 698 aaKnown RBP21.63■■□□□ 1.05
SMG8-203ENST00000578922 APBB1IPQ7Z5R6 666 aaPredicted RBP21.63■■□□□ 1.05
SMG8-203ENST00000578922 SERINC5Q86VE9 423 aa21.63■■□□□ 1.05
SMG8-203ENST00000578922 NIF3L1Q9GZT8 377 aa21.63■■□□□ 1.05
SMG8-203ENST00000578922 TRIM17Q9Y577 477 aa21.63■■□□□ 1.05
SMG8-203ENST00000578922 PTCH2Q9Y6C5 1203 aa21.63■■□□□ 1.05
SMG8-203ENST00000578922 TNFRSF8P28908 595 aa21.62■■□□□ 1.05
SMG8-203ENST00000578922 THPOP40225 353 aa21.62■■□□□ 1.05
SMG8-203ENST00000578922 ACLYP53396 1101 aa21.62■■□□□ 1.05
SMG8-203ENST00000578922 CDR2Q01850 454 aa21.62■■□□□ 1.05
SMG8-203ENST00000578922 PCBP1Q15365 356 aaKnown RBP eCLIP21.62■■□□□ 1.05
SMG8-203ENST00000578922 ZNF394Q53GI3 561 aa21.62■■□□□ 1.05
SMG8-203ENST00000578922 GLRA4Q5JXX5 417 aa21.62■■□□□ 1.05
SMG8-203ENST00000578922 CCDC181Q5TID7 509 aa21.62■■□□□ 1.05
SMG8-203ENST00000578922 RSPH3Q86UC2 560 aa21.62■■□□□ 1.05
SMG8-203ENST00000578922 RBBP8NLQ8NC74 664 aaPredicted RBP21.62■■□□□ 1.05
SMG8-203ENST00000578922 DDX1Q92499 740 aaKnown RBP21.62■■□□□ 1.05
SMG8-203ENST00000578922 THAP2Q9H0W7 228 aa21.62■■□□□ 1.05
SMG8-203ENST00000578922 TRMT13Q9NUP7 481 aaKnown RBP21.62■■□□□ 1.05
SMG8-203ENST00000578922 KLK14Q9P0G3 267 aa21.62■■□□□ 1.05
SMG8-203ENST00000578922 TRPV2Q9Y5S1 764 aa21.62■■□□□ 1.05
SMG8-203ENST00000578922 CITO14578 2027 aa21.62■■□□□ 1.05
SMG8-203ENST00000578922 NCK2O43639 380 aa21.61■■□□□ 1.05
SMG8-203ENST00000578922 FTLP02792 175 aaPredicted RBP21.61■■□□□ 1.05
SMG8-203ENST00000578922 POLR2BP30876 1174 aaKnown RBP21.61■■□□□ 1.05
SMG8-203ENST00000578922 GRK4P32298 578 aa21.61■■□□□ 1.05
SMG8-203ENST00000578922 NFX1Q12986 1120 aaKnown RBP21.61■■□□□ 1.05
SMG8-203ENST00000578922 ITGA7Q13683 1181 aa21.61■■□□□ 1.05
SMG8-203ENST00000578922 SH3TC2Q8TF17 1288 aa21.61■■□□□ 1.05
SMG8-203ENST00000578922 CHRNA1P02708 482 aa21.61■■□□□ 1.05
SMG8-203ENST00000578922 AXLP30530 894 aa21.61■■□□□ 1.05
SMG8-203ENST00000578922 RAP1GAPP47736 663 aa21.61■■□□□ 1.05
SMG8-203ENST00000578922 YARSP54577 528 aaKnown RBP21.61■■□□□ 1.05
SMG8-203ENST00000578922 PTPROQ16827 1216 aa21.61■■□□□ 1.05
SMG8-203ENST00000578922 WDR72Q3MJ13 1102 aa21.61■■□□□ 1.05
SMG8-203ENST00000578922 SLAIN1Q8ND83 568 aa21.61■■□□□ 1.05
SMG8-203ENST00000578922 ARHGEF26Q96DR7 871 aa21.61■■□□□ 1.05
SMG8-203ENST00000578922 ZMAT2Q96NC0 199 aaKnown RBP21.61■■□□□ 1.05
SMG8-203ENST00000578922 RNF39Q9H2S5 420 aa21.61■■□□□ 1.05
SMG8-203ENST00000578922 GOLPH3Q9H4A6 298 aa21.61■■□□□ 1.05
SMG8-203ENST00000578922 HMX1Q9NP08 348 aaPredicted RBP21.61■■□□□ 1.05
SMG8-203ENST00000578922 AGAP1Q9UPQ3 857 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms