RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 CST3P01034 146 aaPredicted RBP18.14■□□□□ 0.49
SREBF1-218ENST00000578469 GZMAP12544 262 aa18.14■□□□□ 0.49
SREBF1-218ENST00000578469 TMEM132DQ14C87 1099 aa18.14■□□□□ 0.49
SREBF1-218ENST00000578469 SLC10A6Q3KNW5 377 aa18.14■□□□□ 0.49
SREBF1-218ENST00000578469 TAF3Q5VWG9 929 aa18.14■□□□□ 0.49
SREBF1-218ENST00000578469 JADE1Q6IE81 842 aa18.14■□□□□ 0.49
SREBF1-218ENST00000578469 SLC47A2Q86VL8 602 aa18.14■□□□□ 0.49
SREBF1-218ENST00000578469 SESTD1Q86VW0 696 aa18.14■□□□□ 0.49
SREBF1-218ENST00000578469 TMEM192Q8IY95 271 aa18.14■□□□□ 0.49
SREBF1-218ENST00000578469 CALR3Q96L12 384 aaKnown RBP18.14■□□□□ 0.49
SREBF1-218ENST00000578469 CELF4Q9BZC1 486 aaKnown RBP18.14■□□□□ 0.49
SREBF1-218ENST00000578469 TRIM6Q9C030 488 aaPredicted RBP18.14■□□□□ 0.49
SREBF1-218ENST00000578469 PRDM6Q9NQX0 595 aa18.14■□□□□ 0.49
SREBF1-218ENST00000578469 C2CD2Q9Y426 696 aa18.14■□□□□ 0.49
SREBF1-218ENST00000578469 SAR1BQ9Y6B6 198 aa18.14■□□□□ 0.49
SREBF1-218ENST00000578469 SPTBN5Q9NRC6 3674 aaKnown RBP18.14■□□□□ 0.49
SREBF1-218ENST00000578469 A0A1W2PQ45 241 aaPredicted RBP18.13■□□□□ 0.49
SREBF1-218ENST00000578469 A0A1W2PQY0 241 aa18.13■□□□□ 0.49
SREBF1-218ENST00000578469 ANKRD62A6NC57 917 aa18.13■□□□□ 0.49
SREBF1-218ENST00000578469 TMCO5BA8MYB1 307 aa18.13■□□□□ 0.49
SREBF1-218ENST00000578469 KIAA0355O15063 1070 aa18.13■□□□□ 0.49
SREBF1-218ENST00000578469 CABYRO75952 493 aa18.13■□□□□ 0.49
SREBF1-218ENST00000578469 ATP1A1P05023 1023 aaKnown RBP18.13■□□□□ 0.49
SREBF1-218ENST00000578469 ASGR1P07306 291 aa18.13■□□□□ 0.49
SREBF1-218ENST00000578469 NFICP08651 508 aa18.13■□□□□ 0.49
SREBF1-218ENST00000578469 KRT19P08727 400 aa18.13■□□□□ 0.49
SREBF1-218ENST00000578469 CHRNB2P17787 502 aa18.13■□□□□ 0.49
SREBF1-218ENST00000578469 ACO1P21399 889 aaKnown RBP18.13■□□□□ 0.49
SREBF1-218ENST00000578469 HOXA11P31270 313 aaPredicted RBP18.13■□□□□ 0.49
SREBF1-218ENST00000578469 ATICP31939 592 aa18.13■□□□□ 0.49
SREBF1-218ENST00000578469 MRPS6P82932 125 aaKnown RBP18.13■□□□□ 0.49
SREBF1-218ENST00000578469 KCNA10Q16322 511 aa18.13■□□□□ 0.49
SREBF1-218ENST00000578469 OLIG1Q8TAK6 271 aa18.13■□□□□ 0.49
SREBF1-218ENST00000578469 ELMO3Q96BJ8 720 aa18.13■□□□□ 0.49
SREBF1-218ENST00000578469 ISCUQ9H1K1 167 aa18.13■□□□□ 0.49
SREBF1-218ENST00000578469 TMEM39AQ9NV64 488 aa18.13■□□□□ 0.49
SREBF1-218ENST00000578469 SALL4Q9UJQ4 1053 aa18.13■□□□□ 0.49
SREBF1-218ENST00000578469 DERAQ9Y315 318 aa18.13■□□□□ 0.49
SREBF1-218ENST00000578469 TRPV2Q9Y5S1 764 aa18.13■□□□□ 0.49
SREBF1-218ENST00000578469 DCDC2CA8MYV0 355 aa18.12■□□□□ 0.49
SREBF1-218ENST00000578469 ENC1O14682 589 aa18.12■□□□□ 0.49
SREBF1-218ENST00000578469 PRLRP16471 622 aa18.12■□□□□ 0.49
SREBF1-218ENST00000578469 TUBB4BP68371 445 aa18.12■□□□□ 0.49
SREBF1-218ENST00000578469 AMPD2Q01433 879 aa18.12■□□□□ 0.49
SREBF1-218ENST00000578469 FMO1Q01740 532 aa18.12■□□□□ 0.49
SREBF1-218ENST00000578469 ZNF667Q5HYK9 610 aa18.12■□□□□ 0.49
SREBF1-218ENST00000578469 GDF6Q6KF10 455 aaPredicted RBP18.12■□□□□ 0.49
SREBF1-218ENST00000578469 TRIM72Q6ZMU5 477 aa18.12■□□□□ 0.49
SREBF1-218ENST00000578469 SYCE1Q8N0S2 351 aa18.12■□□□□ 0.49
SREBF1-218ENST00000578469 RFFLQ8WZ73 363 aa18.12■□□□□ 0.49
SREBF1-218ENST00000578469 ARID3AQ99856 593 aa18.12■□□□□ 0.49
SREBF1-218ENST00000578469 PDCL3Q9H2J4 239 aa18.12■□□□□ 0.49
SREBF1-218ENST00000578469 ITGA11Q9UKX5 1188 aa18.12■□□□□ 0.49
SREBF1-218ENST00000578469 CNTN6Q9UQ52 1028 aa18.12■□□□□ 0.49
SREBF1-218ENST00000578469 PIN4Q9Y237 131 aaKnown RBP18.12■□□□□ 0.49
SREBF1-218ENST00000578469 PCDHGC5Q9Y5F6 944 aa18.12■□□□□ 0.49
SREBF1-218ENST00000578469 NCANO14594 1321 aa18.12■□□□□ 0.49
SREBF1-218ENST00000578469 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.11■□□□□ 0.49
SREBF1-218ENST00000578469 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.11■□□□□ 0.49
SREBF1-218ENST00000578469 PALMO75781 387 aa18.11■□□□□ 0.49
SREBF1-218ENST00000578469 FTLP02792 175 aaPredicted RBP18.11■□□□□ 0.49
SREBF1-218ENST00000578469 MMEP08473 750 aa18.11■□□□□ 0.49
SREBF1-218ENST00000578469 P4HA1P13674 534 aa18.11■□□□□ 0.49
SREBF1-218ENST00000578469 TCP1P17987 556 aaKnown RBP18.11■□□□□ 0.49
SREBF1-218ENST00000578469 DNAJB2P25686 324 aa18.11■□□□□ 0.49
SREBF1-218ENST00000578469 RBP5P82980 135 aa18.11■□□□□ 0.49
SREBF1-218ENST00000578469 PTPN11Q06124 597 aaPredicted RBP18.11■□□□□ 0.49
SREBF1-218ENST00000578469 CKAP4Q07065 602 aaKnown RBP18.11■□□□□ 0.49
SREBF1-218ENST00000578469 PPP1R2P3Q6NXS1 205 aa18.11■□□□□ 0.49
SREBF1-218ENST00000578469 TMEM270Q6UE05 265 aa18.11■□□□□ 0.49
SREBF1-218ENST00000578469 RPAINQ86UA6 219 aa18.11■□□□□ 0.49
SREBF1-218ENST00000578469 RHOT2Q8IXI1 618 aa18.11■□□□□ 0.49
SREBF1-218ENST00000578469 RBBP8NLQ8NC74 664 aaPredicted RBP18.11■□□□□ 0.49
SREBF1-218ENST00000578469 KIF12Q96FN5 646 aa18.11■□□□□ 0.49
SREBF1-218ENST00000578469 TSPAN18Q96SJ8 248 aa18.11■□□□□ 0.49
SREBF1-218ENST00000578469 TSEN34Q9BSV6 310 aaKnown RBP18.11■□□□□ 0.49
SREBF1-218ENST00000578469 STARD7Q9NQZ5 370 aa18.11■□□□□ 0.49
SREBF1-218ENST00000578469 SNTG2Q9NY99 539 aa18.11■□□□□ 0.49
SREBF1-218ENST00000578469 HYOU1Q9Y4L1 999 aa18.11■□□□□ 0.49
SREBF1-218ENST00000578469 UMODL1Q5DID0 1318 aa18.1■□□□□ 0.49
SREBF1-218ENST00000578469 EFCAB8A8MWE9 144 aa18.1■□□□□ 0.49
SREBF1-218ENST00000578469 ITGB3P05106 788 aa18.1■□□□□ 0.49
SREBF1-218ENST00000578469 ABCB4P21439 1286 aa18.1■□□□□ 0.49
SREBF1-218ENST00000578469 GNA15P30679 374 aa18.1■□□□□ 0.49
SREBF1-218ENST00000578469 GPC5P78333 572 aa18.1■□□□□ 0.49
SREBF1-218ENST00000578469 TJAP1Q5JTD0 557 aa18.1■□□□□ 0.49
SREBF1-218ENST00000578469 CCSAPQ6IQ19 270 aaPredicted RBP18.1■□□□□ 0.49
SREBF1-218ENST00000578469 ACAD10Q6JQN1 1059 aa18.1■□□□□ 0.49
SREBF1-218ENST00000578469 SERINC5Q86VE9 423 aa18.1■□□□□ 0.49
SREBF1-218ENST00000578469 C1orf127Q8N9H9 656 aa18.1■□□□□ 0.49
SREBF1-218ENST00000578469 TMEM40Q8WWA1 233 aa18.1■□□□□ 0.49
SREBF1-218ENST00000578469 DDX1Q92499 740 aaKnown RBP18.1■□□□□ 0.49
SREBF1-218ENST00000578469 UBXN4Q92575 508 aa18.1■□□□□ 0.49
SREBF1-218ENST00000578469 TOX2Q96NM4 488 aa18.1■□□□□ 0.49
SREBF1-218ENST00000578469 PCDHB18PQ96TA0 734 aa18.1■□□□□ 0.49
SREBF1-218ENST00000578469 XYLT2Q9H1B5 865 aa18.1■□□□□ 0.49
SREBF1-218ENST00000578469 DPP3Q9NY33 737 aa18.1■□□□□ 0.49
SREBF1-218ENST00000578469 TAS2R14Q9NYV8 317 aa18.1■□□□□ 0.49
SREBF1-218ENST00000578469 SNX12Q9UMY4 172 aa18.1■□□□□ 0.49
SREBF1-218ENST00000578469 CDY2AQ9Y6F7 541 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms