RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 SHKBP1Q8TBC3 707 aa22.9■■□□□ 1.26
TSEN54-205ENST00000578415 SPIRE2Q8WWL2 714 aa22.9■■□□□ 1.26
TSEN54-205ENST00000578415 RSPRY1Q96DX4 576 aa22.9■■□□□ 1.26
TSEN54-205ENST00000578415 USP18Q9UMW8 372 aa22.9■■□□□ 1.26
TSEN54-205ENST00000578415 PRR5-ARHGAP8B1AHC4 643 aa22.89■■□□□ 1.25
TSEN54-205ENST00000578415 M0QZQ0 153 aa22.89■■□□□ 1.25
TSEN54-205ENST00000578415 ZNF263O14978 683 aa22.89■■□□□ 1.25
TSEN54-205ENST00000578415 CHRNB1P11230 501 aa22.89■■□□□ 1.25
TSEN54-205ENST00000578415 ARHGAP8P85298 464 aa22.89■■□□□ 1.25
TSEN54-205ENST00000578415 MCL1Q07820 350 aa22.89■■□□□ 1.25
TSEN54-205ENST00000578415 GAS6Q14393 721 aa22.89■■□□□ 1.25
TSEN54-205ENST00000578415 TMC8Q8IU68 726 aa22.89■■□□□ 1.25
TSEN54-205ENST00000578415 MFSD6LQ8IWD5 586 aa22.89■■□□□ 1.25
TSEN54-205ENST00000578415 LRRC3Q9BY71 257 aa22.89■■□□□ 1.25
TSEN54-205ENST00000578415 HAPLN2Q9GZV7 340 aa22.89■■□□□ 1.25
TSEN54-205ENST00000578415 CRISPLD1Q9H336 500 aa22.89■■□□□ 1.25
TSEN54-205ENST00000578415 GMEB2Q9UKD1 530 aa22.89■■□□□ 1.25
TSEN54-205ENST00000578415 CDV3Q9UKY7 258 aaKnown RBP22.89■■□□□ 1.25
TSEN54-205ENST00000578415 TIMM13Q9Y5L4 95 aaPredicted RBP22.89■■□□□ 1.25
TSEN54-205ENST00000578415 HEPACAM2A8MVW5 462 aa22.88■■□□□ 1.25
TSEN54-205ENST00000578415 OAZ2O95190 189 aa22.88■■□□□ 1.25
TSEN54-205ENST00000578415 OR4Q2P0C623 313 aa22.88■■□□□ 1.25
TSEN54-205ENST00000578415 CXCL8P10145 99 aa22.88■■□□□ 1.25
TSEN54-205ENST00000578415 MAPTP10636 758 aaKnown RBP22.88■■□□□ 1.25
TSEN54-205ENST00000578415 PLS3P13797 630 aa22.88■■□□□ 1.25
TSEN54-205ENST00000578415 CCNE1P24864 410 aa22.88■■□□□ 1.25
TSEN54-205ENST00000578415 MARCKSP29966 332 aaPredicted RBP22.88■■□□□ 1.25
TSEN54-205ENST00000578415 CCR3P51677 355 aa22.88■■□□□ 1.25
TSEN54-205ENST00000578415 NRLP54845 237 aa22.88■■□□□ 1.25
TSEN54-205ENST00000578415 YWHAHQ04917 246 aaPredicted RBP22.88■■□□□ 1.25
TSEN54-205ENST00000578415 SPAG1Q07617 926 aa22.88■■□□□ 1.25
TSEN54-205ENST00000578415 RAD51AP2Q09MP3 1159 aa22.88■■□□□ 1.25
TSEN54-205ENST00000578415 STRN3Q13033 797 aa22.88■■□□□ 1.25
TSEN54-205ENST00000578415 LPAL2Q16609 132 aa22.88■■□□□ 1.25
TSEN54-205ENST00000578415 ZPBP2Q6X784 338 aa22.88■■□□□ 1.25
TSEN54-205ENST00000578415 FAM184AQ8NB25 1140 aa22.88■■□□□ 1.25
TSEN54-205ENST00000578415 TIPINQ9BVW5 301 aa22.88■■□□□ 1.25
TSEN54-205ENST00000578415 DNAJC25Q9H1X3 360 aa22.88■■□□□ 1.25
TSEN54-205ENST00000578415 LAD1O00515 517 aa22.87■■□□□ 1.25
TSEN54-205ENST00000578415 LRPAP1P30533 357 aa22.87■■□□□ 1.25
TSEN54-205ENST00000578415 PRPHP41219 470 aa22.87■■□□□ 1.25
TSEN54-205ENST00000578415 AARSP49588 968 aaKnown RBP eCLIP22.87■■□□□ 1.25
TSEN54-205ENST00000578415 SATB1Q01826 763 aa22.87■■□□□ 1.25
TSEN54-205ENST00000578415 PPP2R5DQ14738 602 aa22.87■■□□□ 1.25
TSEN54-205ENST00000578415 ZBTB6Q15916 424 aa22.87■■□□□ 1.25
TSEN54-205ENST00000578415 CNTNAP3BQ96NU0 1288 aa22.87■■□□□ 1.25
TSEN54-205ENST00000578415 PGLYRP2Q96PD5 576 aa22.87■■□□□ 1.25
TSEN54-205ENST00000578415 CNTNAP3Q9BZ76 1288 aa22.87■■□□□ 1.25
TSEN54-205ENST00000578415 SLITRK6Q9H5Y7 841 aa22.87■■□□□ 1.25
TSEN54-205ENST00000578415 CITO14578 2027 aa22.87■■□□□ 1.25
TSEN54-205ENST00000578415 TICRRQ7Z2Z1 1910 aa22.86■■□□□ 1.25
TSEN54-205ENST00000578415 EPG5Q9HCE0 2579 aa22.86■■□□□ 1.25
TSEN54-205ENST00000578415 A0A1W2PRU2 124 aa22.86■■□□□ 1.25
TSEN54-205ENST00000578415 TTC26A0AVF1 554 aa22.86■■□□□ 1.25
TSEN54-205ENST00000578415 CLDN3O15551 220 aa22.86■■□□□ 1.25
TSEN54-205ENST00000578415 MLLT6P55198 1093 aaPredicted RBP22.86■■□□□ 1.25
TSEN54-205ENST00000578415 DTHD1Q6ZMT9 781 aa22.86■■□□□ 1.25
TSEN54-205ENST00000578415 CELF5Q8N6W0 485 aaKnown RBP22.86■■□□□ 1.25
TSEN54-205ENST00000578415 PNMA5Q96PV4 448 aa22.86■■□□□ 1.25
TSEN54-205ENST00000578415 GPR88Q9GZN0 384 aa22.86■■□□□ 1.25
TSEN54-205ENST00000578415 PLEKHA5Q9HAU0 1116 aa22.86■■□□□ 1.25
TSEN54-205ENST00000578415 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.86■■□□□ 1.25
TSEN54-205ENST00000578415 TPRP12270 2363 aaKnown RBP22.86■■□□□ 1.25
TSEN54-205ENST00000578415 DCDC2BA2VCK2 349 aa22.85■■□□□ 1.25
TSEN54-205ENST00000578415 CLTAP09496 248 aa22.85■■□□□ 1.25
TSEN54-205ENST00000578415 CXCL12P48061 93 aa22.85■■□□□ 1.25
TSEN54-205ENST00000578415 SMTNP53814 917 aa22.85■■□□□ 1.25
TSEN54-205ENST00000578415 FCHO2Q0JRZ9 810 aa22.85■■□□□ 1.25
TSEN54-205ENST00000578415 SPEM2Q0P670 501 aa22.85■■□□□ 1.25
TSEN54-205ENST00000578415 DUSP4Q13115 394 aa22.85■■□□□ 1.25
TSEN54-205ENST00000578415 ZRSR1Q15695 479 aaKnown RBP22.85■■□□□ 1.25
TSEN54-205ENST00000578415 WDR44Q5JSH3 913 aa22.85■■□□□ 1.25
TSEN54-205ENST00000578415 HYIQ5T013 277 aa22.85■■□□□ 1.25
TSEN54-205ENST00000578415 STXBP5Q5T5C0 1151 aa22.85■■□□□ 1.25
TSEN54-205ENST00000578415 LAIR1Q6GTX8 287 aa22.85■■□□□ 1.25
TSEN54-205ENST00000578415 E2F7Q96AV8 911 aa22.85■■□□□ 1.25
TSEN54-205ENST00000578415 KIF12Q96FN5 646 aa22.85■■□□□ 1.25
TSEN54-205ENST00000578415 RTKNQ9BST9 563 aa22.85■■□□□ 1.25
TSEN54-205ENST00000578415 MKNK1Q9BUB5 465 aa22.85■■□□□ 1.25
TSEN54-205ENST00000578415 OXCT2Q9BYC2 517 aaPredicted RBP22.85■■□□□ 1.25
TSEN54-205ENST00000578415 RBM12Q9NTZ6 932 aaKnown RBP22.85■■□□□ 1.25
TSEN54-205ENST00000578415 RAB23Q9ULC3 237 aa22.85■■□□□ 1.25
TSEN54-205ENST00000578415 PDCD11Q14690 1871 aaKnown RBP22.84■■□□□ 1.25
TSEN54-205ENST00000578415 CYP3A5P20815 502 aa22.84■■□□□ 1.25
TSEN54-205ENST00000578415 TNFSF9P41273 254 aa22.84■■□□□ 1.25
TSEN54-205ENST00000578415 SOX9P48436 509 aa22.84■■□□□ 1.25
TSEN54-205ENST00000578415 GUCY2FP51841 1108 aa22.84■■□□□ 1.25
TSEN54-205ENST00000578415 SLC12A3P55017 1021 aa22.84■■□□□ 1.25
TSEN54-205ENST00000578415 DMWDQ09019 674 aa22.84■■□□□ 1.25
TSEN54-205ENST00000578415 GPR17Q13304 367 aa22.84■■□□□ 1.25
TSEN54-205ENST00000578415 PLD1Q13393 1074 aa22.84■■□□□ 1.25
TSEN54-205ENST00000578415 SYT2Q8N9I0 419 aaPredicted RBP22.84■■□□□ 1.25
TSEN54-205ENST00000578415 ZSCAN31Q96LW9 406 aaPredicted RBP22.84■■□□□ 1.25
TSEN54-205ENST00000578415 LRRC3BQ96PB8 259 aa22.84■■□□□ 1.25
TSEN54-205ENST00000578415 KCNG1Q9UIX4 513 aa22.84■■□□□ 1.25
TSEN54-205ENST00000578415 UBQLN1Q9UMX0 589 aaKnown RBP22.84■■□□□ 1.25
TSEN54-205ENST00000578415 OR6C75A6NL08 312 aa22.83■■□□□ 1.25
TSEN54-205ENST00000578415 SLC38A8A6NNN8 435 aa22.83■■□□□ 1.25
TSEN54-205ENST00000578415 PPEF2O14830 753 aa22.83■■□□□ 1.25
TSEN54-205ENST00000578415 CHADO15335 359 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms