RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 SF3A3Q12874 501 aaKnown RBP eCLIP18.67■□□□□ 0.582e-6■■■□□ 17.3
ERBB2-205ENST00000578199 CCDC38Q502W7 563 aa18.67■□□□□ 0.58
ERBB2-205ENST00000578199 FAM160B1Q5W0V3 765 aa18.67■□□□□ 0.58
ERBB2-205ENST00000578199 METTL7BQ6UX53 244 aa18.67■□□□□ 0.58
ERBB2-205ENST00000578199 SCARA5Q6ZMJ2 495 aa18.67■□□□□ 0.58
ERBB2-205ENST00000578199 HOOK3Q86VS8 718 aa18.67■□□□□ 0.58
ERBB2-205ENST00000578199 TRIM11Q96F44 468 aa18.67■□□□□ 0.58
ERBB2-205ENST00000578199 SELENOSQ9BQE4 189 aa18.67■□□□□ 0.58
ERBB2-205ENST00000578199 DCLK3Q9C098 648 aa18.67■□□□□ 0.58
ERBB2-205ENST00000578199 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.67■□□□□ 0.58
ERBB2-205ENST00000578199 SIP14410 1827 aa18.67■□□□□ 0.58
ERBB2-205ENST00000578199 RARGP13631 454 aa18.66■□□□□ 0.58
ERBB2-205ENST00000578199 IRX3P78415 501 aaPredicted RBP18.66■□□□□ 0.58
ERBB2-205ENST00000578199 RHPN2Q8IUC4 686 aa18.66■□□□□ 0.58
ERBB2-205ENST00000578199 THNSL1Q8IYQ7 743 aa18.66■□□□□ 0.58
ERBB2-205ENST00000578199 CEP120Q8N960 986 aa18.66■□□□□ 0.58
ERBB2-205ENST00000578199 CDC42EP4Q9H3Q1 356 aaKnown RBP18.66■□□□□ 0.58
ERBB2-205ENST00000578199 LOC285556D6RIA3 1793 aa18.66■□□□□ 0.58
ERBB2-205ENST00000578199 RGS16O15492 202 aaPredicted RBP18.66■□□□□ 0.58
ERBB2-205ENST00000578199 IVDP26440 423 aa18.66■□□□□ 0.58
ERBB2-205ENST00000578199 KAZNQ674X7 775 aa18.66■□□□□ 0.58
ERBB2-205ENST00000578199 PLEKHA7Q6IQ23 1121 aa18.66■□□□□ 0.58
ERBB2-205ENST00000578199 BRSK2Q8IWQ3 736 aa18.66■□□□□ 0.58
ERBB2-205ENST00000578199 MICALL1Q8N3F8 863 aa18.66■□□□□ 0.58
ERBB2-205ENST00000578199 ACSF2Q96CM8 615 aaPredicted RBP18.66■□□□□ 0.58
ERBB2-205ENST00000578199 ACO2Q99798 780 aaKnown RBP18.66■□□□□ 0.58
ERBB2-205ENST00000578199 ASCC2Q9H1I8 757 aaPredicted RBP18.66■□□□□ 0.58
ERBB2-205ENST00000578199 FOXO6A8MYZ6 492 aa18.65■□□□□ 0.58
ERBB2-205ENST00000578199 ZBTB42B2RXF5 422 aa18.65■□□□□ 0.58
ERBB2-205ENST00000578199 SOCS7O14512 581 aa18.65■□□□□ 0.58
ERBB2-205ENST00000578199 B4GALT5O43286 388 aa18.65■□□□□ 0.58
ERBB2-205ENST00000578199 TOM1L1O75674 476 aa18.65■□□□□ 0.58
ERBB2-205ENST00000578199 CNMDO75829 334 aa18.65■□□□□ 0.58
ERBB2-205ENST00000578199 KRT10P13645 584 aa18.65■□□□□ 0.58
ERBB2-205ENST00000578199 TBXAS1P24557 533 aaPredicted RBP18.65■□□□□ 0.58
ERBB2-205ENST00000578199 ITGA8P53708 1063 aa18.65■□□□□ 0.58
ERBB2-205ENST00000578199 TFAMQ00059 246 aaKnown RBP18.65■□□□□ 0.58
ERBB2-205ENST00000578199 BYSLQ13895 437 aaKnown RBP18.65■□□□□ 0.58
ERBB2-205ENST00000578199 LONRF1Q17RB8 773 aa18.65■□□□□ 0.58
ERBB2-205ENST00000578199 ZFYVE27Q5T4F4 411 aa18.65■□□□□ 0.58
ERBB2-205ENST00000578199 WDR78Q5VTH9 848 aa18.65■□□□□ 0.58
ERBB2-205ENST00000578199 B4GALNT4Q76KP1 1039 aa18.65■□□□□ 0.58
ERBB2-205ENST00000578199 PHF13Q86YI8 300 aaPredicted RBP18.65■□□□□ 0.58
ERBB2-205ENST00000578199 CNTN6Q9UQ52 1028 aa18.65■□□□□ 0.58
ERBB2-205ENST00000578199 CSDE1O75534 798 aaKnown RBP18.65■□□□□ 0.58
ERBB2-205ENST00000578199 ASS1P00966 412 aaKnown RBP18.65■□□□□ 0.58
ERBB2-205ENST00000578199 CHN1P15882 459 aa18.65■□□□□ 0.58
ERBB2-205ENST00000578199 KLF1Q13351 362 aaPredicted RBP18.65■□□□□ 0.58
ERBB2-205ENST00000578199 SLMAPQ14BN4 828 aa18.65■□□□□ 0.58
ERBB2-205ENST00000578199 FBXO16Q8IX29 292 aaPredicted RBP18.65■□□□□ 0.58
ERBB2-205ENST00000578199 RHOT1Q8IXI2 618 aa18.65■□□□□ 0.58
ERBB2-205ENST00000578199 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.65■□□□□ 0.58
ERBB2-205ENST00000578199 NLRP4Q96MN2 994 aa18.65■□□□□ 0.58
ERBB2-205ENST00000578199 RUNDC3BQ96NL0 473 aa18.65■□□□□ 0.58
ERBB2-205ENST00000578199 GPR20Q99678 358 aa18.65■□□□□ 0.58
ERBB2-205ENST00000578199 MRPL4Q9BYD3 311 aaKnown RBP18.65■□□□□ 0.58
ERBB2-205ENST00000578199 IMPG2Q9BZV3 1241 aa18.65■□□□□ 0.58
ERBB2-205ENST00000578199 CCDC113Q9H0I3 377 aa18.65■□□□□ 0.58
ERBB2-205ENST00000578199 ADAM7Q9H2U9 754 aa18.65■□□□□ 0.58
ERBB2-205ENST00000578199 MRPL47Q9HD33 250 aaKnown RBP18.65■□□□□ 0.58
ERBB2-205ENST00000578199 PAPPA2Q9BXP8 1791 aa18.64■□□□□ 0.58
ERBB2-205ENST00000578199 NOP56O00567 594 aaKnown RBP18.64■□□□□ 0.57
ERBB2-205ENST00000578199 PRKCBP05771 671 aa18.64■□□□□ 0.57
ERBB2-205ENST00000578199 GBP1P32455 592 aa18.64■□□□□ 0.57
ERBB2-205ENST00000578199 ADCY8P40145 1251 aa18.64■□□□□ 0.57
ERBB2-205ENST00000578199 IFT88Q13099 833 aa18.64■□□□□ 0.57
ERBB2-205ENST00000578199 FEZF2Q8TBJ5 459 aa18.64■□□□□ 0.57
ERBB2-205ENST00000578199 PGM2Q96G03 612 aa18.64■□□□□ 0.57
ERBB2-205ENST00000578199 FGD4Q96M96 766 aa18.64■□□□□ 0.57
ERBB2-205ENST00000578199 OSBPL8Q9BZF1 889 aa18.64■□□□□ 0.57
ERBB2-205ENST00000578199 CISHQ9NSE2 258 aa18.64■□□□□ 0.57
ERBB2-205ENST00000578199 F8VP50 259 aa18.64■□□□□ 0.57
ERBB2-205ENST00000578199 POTEJP0CG39 1038 aa18.64■□□□□ 0.57
ERBB2-205ENST00000578199 TXNRD3NBQ6F5E7 133 aa18.64■□□□□ 0.57
ERBB2-205ENST00000578199 ZPBP2Q6X784 338 aa18.64■□□□□ 0.57
ERBB2-205ENST00000578199 PACS2Q86VP3 889 aa18.64■□□□□ 0.57
ERBB2-205ENST00000578199 TMEM192Q8IY95 271 aa18.64■□□□□ 0.57
ERBB2-205ENST00000578199 KCNN1Q92952 543 aa18.64■□□□□ 0.57
ERBB2-205ENST00000578199 SLCO2A1Q92959 643 aa18.64■□□□□ 0.57
ERBB2-205ENST00000578199 PPP1R16BQ96T49 567 aa18.64■□□□□ 0.57
ERBB2-205ENST00000578199 DDX20Q9UHI6 824 aaKnown RBP18.64■□□□□ 0.57
ERBB2-205ENST00000578199 ZNF252P-AS1Q0IIN9 211 aa18.63■□□□□ 0.57
ERBB2-205ENST00000578199 AUHQ13825 339 aaKnown RBP18.63■□□□□ 0.57
ERBB2-205ENST00000578199 KYNUQ16719 465 aa18.63■□□□□ 0.57
ERBB2-205ENST00000578199 CYP4A22Q5TCH4 519 aa18.63■□□□□ 0.57
ERBB2-205ENST00000578199 TRIM72Q6ZMU5 477 aa18.63■□□□□ 0.57
ERBB2-205ENST00000578199 TADA2BQ86TJ2 420 aa18.63■□□□□ 0.57
ERBB2-205ENST00000578199 WDR49Q8IV35 697 aa18.63■□□□□ 0.57
ERBB2-205ENST00000578199 UBR7Q8N806 425 aa18.63■□□□□ 0.57
ERBB2-205ENST00000578199 TFAP2BQ92481 460 aa18.63■□□□□ 0.57
ERBB2-205ENST00000578199 SNF8Q96H20 258 aa18.63■□□□□ 0.57
ERBB2-205ENST00000578199 SCLT1Q96NL6 688 aa18.63■□□□□ 0.57
ERBB2-205ENST00000578199 MCEEQ96PE7 176 aa18.63■□□□□ 0.57
ERBB2-205ENST00000578199 PDGFCQ9NRA1 345 aa18.63■□□□□ 0.57
ERBB2-205ENST00000578199 PARVAQ9NVD7 372 aa18.63■□□□□ 0.57
ERBB2-205ENST00000578199 WHRNQ9P202 907 aa18.63■□□□□ 0.57
ERBB2-205ENST00000578199 A0A087WUV0 522 aaPredicted RBP18.63■□□□□ 0.57
ERBB2-205ENST00000578199 INO80B-WBP1J3KQ70 363 aa18.63■□□□□ 0.57
ERBB2-205ENST00000578199 RASGRF2O14827 1237 aa18.63■□□□□ 0.57
ERBB2-205ENST00000578199 TGFB3P10600 412 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms