RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 HSP90AA4PQ58FG1 418 aa13.67□□□□□ -0.22
MKS1-206ENST00000577824 ANKRD20A12PQ8NF67 263 aa13.67□□□□□ -0.22
MKS1-206ENST00000577824 LMO3Q8TAP4 145 aa13.67□□□□□ -0.22
MKS1-206ENST00000577824 SPATA18Q8TC71 538 aa13.67□□□□□ -0.22
MKS1-206ENST00000577824 TAS1R2Q8TE23 839 aa13.67□□□□□ -0.22
MKS1-206ENST00000577824 LMAN2LQ9H0V9 348 aa13.67□□□□□ -0.22
MKS1-206ENST00000577824 TTYH1Q9H313 450 aaPredicted RBP13.67□□□□□ -0.22
MKS1-206ENST00000577824 NDST4Q9H3R1 872 aa13.67□□□□□ -0.22
MKS1-206ENST00000577824 ZNF576Q9H609 170 aa13.67□□□□□ -0.22
MKS1-206ENST00000577824 RTN4Q9NQC3 1192 aaKnown RBP13.67□□□□□ -0.22
MKS1-206ENST00000577824 CHST7Q9NS84 486 aa13.67□□□□□ -0.22
MKS1-206ENST00000577824 RAB20Q9NX57 234 aa13.67□□□□□ -0.22
MKS1-206ENST00000577824 SCN1AP35498 2009 aa13.67□□□□□ -0.22
MKS1-206ENST00000577824 XIRP2A4UGR9 3374 aa13.67□□□□□ -0.22
MKS1-206ENST00000577824 ATG2AQ2TAZ0 1938 aa13.66□□□□□ -0.22
MKS1-206ENST00000577824 EPOPA6NHQ4 379 aa13.66□□□□□ -0.22
MKS1-206ENST00000577824 KPNA7A9QM74 516 aa13.66□□□□□ -0.22
MKS1-206ENST00000577824 GOLGA6L19H0YKK7 550 aa13.66□□□□□ -0.22
MKS1-206ENST00000577824 SYN3O14994 580 aa13.66□□□□□ -0.22
MKS1-206ENST00000577824 TRAPPC3O43617 180 aa13.66□□□□□ -0.22
MKS1-206ENST00000577824 TADA2AO75478 443 aa13.66□□□□□ -0.22
MKS1-206ENST00000577824 CYP11A1P05108 521 aa13.66□□□□□ -0.22
MKS1-206ENST00000577824 FGFR3P22607 806 aa13.66□□□□□ -0.22
MKS1-206ENST00000577824 MYL6P60660 151 aa13.66□□□□□ -0.22
MKS1-206ENST00000577824 TPM4P67936 248 aa13.66□□□□□ -0.22
MKS1-206ENST00000577824 KRT17Q04695 432 aa13.66□□□□□ -0.22
MKS1-206ENST00000577824 MYO1EQ12965 1108 aa13.66□□□□□ -0.22
MKS1-206ENST00000577824 TIGD5Q53EQ6 642 aa13.66□□□□□ -0.22
MKS1-206ENST00000577824 SMYD5Q6GMV2 418 aa13.66□□□□□ -0.22
MKS1-206ENST00000577824 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.66□□□□□ -0.22
MKS1-206ENST00000577824 SPPL3Q8TCT6 385 aa13.66□□□□□ -0.22
MKS1-206ENST00000577824 HASPINQ8TF76 798 aa13.66□□□□□ -0.22
MKS1-206ENST00000577824 RABGGTAQ92696 567 aa13.66□□□□□ -0.22
MKS1-206ENST00000577824 SEMA4DQ92854 862 aa13.66□□□□□ -0.22
MKS1-206ENST00000577824 LRCH3Q96II8 777 aa13.66□□□□□ -0.22
MKS1-206ENST00000577824 HPDLQ96IR7 371 aa13.66□□□□□ -0.22
MKS1-206ENST00000577824 GPR62Q9BZJ7 368 aa13.66□□□□□ -0.22
MKS1-206ENST00000577824 ZBP1Q9H171 429 aa13.66□□□□□ -0.22
MKS1-206ENST00000577824 PCDHB8Q9UN66 801 aa13.66□□□□□ -0.22
MKS1-206ENST00000577824 NUB1Q9Y5A7 615 aa13.66□□□□□ -0.22
MKS1-206ENST00000577824 IRAK3Q9Y616 596 aa13.66□□□□□ -0.22
MKS1-206ENST00000577824 VWA8A3KMH1 1905 aa13.66□□□□□ -0.22
MKS1-206ENST00000577824 ARHGEF37A1IGU5 675 aa13.65□□□□□ -0.22
MKS1-206ENST00000577824 LGALS16A8MUM7 142 aa13.65□□□□□ -0.22
MKS1-206ENST00000577824 FSCN2O14926 492 aa13.65□□□□□ -0.22
MKS1-206ENST00000577824 LPXNO60711 386 aa13.65□□□□□ -0.22
MKS1-206ENST00000577824 PHACTR2O75167 634 aa13.65□□□□□ -0.22
MKS1-206ENST00000577824 KRT19P08727 400 aa13.65□□□□□ -0.22
MKS1-206ENST00000577824 FAM163BP0C2L3 166 aa13.65□□□□□ -0.22
MKS1-206ENST00000577824 TYMPP19971 482 aa13.65□□□□□ -0.22
MKS1-206ENST00000577824 BRCC3P46736 316 aa13.65□□□□□ -0.22
MKS1-206ENST00000577824 COPB1P53618 953 aaKnown RBP13.65□□□□□ -0.22
MKS1-206ENST00000577824 DSG1Q02413 1049 aa13.65□□□□□ -0.22
MKS1-206ENST00000577824 CETN1Q12798 172 aa13.65□□□□□ -0.22
MKS1-206ENST00000577824 TRPC3Q13507 836 aa13.65□□□□□ -0.22
MKS1-206ENST00000577824 CAMK1Q14012 370 aa13.65□□□□□ -0.22
MKS1-206ENST00000577824 SGSM1Q2NKQ1 1148 aa13.65□□□□□ -0.22
MKS1-206ENST00000577824 ZNF699Q32M78 642 aa13.65□□□□□ -0.22
MKS1-206ENST00000577824 DPH6Q7L8W6 267 aa13.65□□□□□ -0.22
MKS1-206ENST00000577824 GAS2L3Q86XJ1 694 aa13.65□□□□□ -0.22
MKS1-206ENST00000577824 TOP6BLQ8N6T0 577 aa13.65□□□□□ -0.22
MKS1-206ENST00000577824 BCO2Q9BYV7 579 aa13.65□□□□□ -0.22
MKS1-206ENST00000577824 FAM124BQ9H5Z6 455 aaPredicted RBP13.65□□□□□ -0.22
MKS1-206ENST00000577824 MMRN2Q9H8L6 949 aa13.65□□□□□ -0.22
MKS1-206ENST00000577824 TAB2Q9NYJ8 693 aa13.65□□□□□ -0.22
MKS1-206ENST00000577824 MTUS1Q9ULD2 1270 aa13.65□□□□□ -0.22
MKS1-206ENST00000577824 SPTBN5Q9NRC6 3674 aaKnown RBP13.65□□□□□ -0.22
MKS1-206ENST00000577824 A0A1B0GTH6 734 aa13.64□□□□□ -0.23
MKS1-206ENST00000577824 GRM6O15303 877 aa13.64□□□□□ -0.23
MKS1-206ENST00000577824 TPM2P07951 284 aa13.64□□□□□ -0.23
MKS1-206ENST00000577824 CTSAP10619 480 aa13.64□□□□□ -0.23
MKS1-206ENST00000577824 DNAJB1P25685 340 aa13.64□□□□□ -0.23
MKS1-206ENST00000577824 ASPAP45381 313 aa13.64□□□□□ -0.23
MKS1-206ENST00000577824 NOP14P78316 857 aaKnown RBP13.64□□□□□ -0.23
MKS1-206ENST00000577824 GPM6BQ13491 265 aa13.64□□□□□ -0.23
MKS1-206ENST00000577824 MRPL58Q14197 206 aaKnown RBP13.64□□□□□ -0.23
MKS1-206ENST00000577824 USP41Q3LFD5 358 aa13.64□□□□□ -0.23
MKS1-206ENST00000577824 ZNF697Q5TEC3 545 aa13.64□□□□□ -0.23
MKS1-206ENST00000577824 PDE12Q6L8Q7 609 aaKnown RBP13.64□□□□□ -0.23
MKS1-206ENST00000577824 GDPD5Q8WTR4 605 aa13.64□□□□□ -0.23
MKS1-206ENST00000577824 POF1BQ8WVV4 589 aa13.64□□□□□ -0.23
MKS1-206ENST00000577824 ARNTL2Q8WYA1 636 aa13.64□□□□□ -0.23
MKS1-206ENST00000577824 PIK3R5Q8WYR1 880 aa13.64□□□□□ -0.23
MKS1-206ENST00000577824 SENP8Q96LD8 212 aa13.64□□□□□ -0.23
MKS1-206ENST00000577824 IMPG2Q9BZV3 1241 aa13.64□□□□□ -0.23
MKS1-206ENST00000577824 NIF3L1Q9GZT8 377 aa13.64□□□□□ -0.23
MKS1-206ENST00000577824 APOBEC3GQ9HC16 384 aaKnown RBP13.64□□□□□ -0.23
MKS1-206ENST00000577824 TLR9Q9NR96 1032 aa13.64□□□□□ -0.23
MKS1-206ENST00000577824 GCNT4Q9P109 453 aa13.64□□□□□ -0.23
MKS1-206ENST00000577824 PUF60Q9UHX1 559 aaKnown RBP13.64□□□□□ -0.23
MKS1-206ENST00000577824 DSEQ9UL01 958 aa13.64□□□□□ -0.23
MKS1-206ENST00000577824 L1RE1Q9UN81 338 aa13.64□□□□□ -0.23
MKS1-206ENST00000577824 R3HCC1Q9Y3T6 440 aaKnown RBP13.64□□□□□ -0.23
MKS1-206ENST00000577824 TBC1D4O60343 1298 aa13.63□□□□□ -0.23
MKS1-206ENST00000577824 LILRB3O75022 631 aa13.63□□□□□ -0.23
MKS1-206ENST00000577824 LRRN2O75325 713 aa13.63□□□□□ -0.23
MKS1-206ENST00000577824 TACC1O75410 805 aa13.63□□□□□ -0.23
MKS1-206ENST00000577824 OAZ2O95190 189 aa13.63□□□□□ -0.23
MKS1-206ENST00000577824 ODC1P11926 461 aa13.63□□□□□ -0.23
MKS1-206ENST00000577824 POU3F3P20264 500 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms