RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 TNK2Q07912 1038 aa15.52■□□□□ 0.08
PPP4R1-206ENST00000577779 PRPF4BQ13523 1007 aaKnown RBP15.52■□□□□ 0.08
PPP4R1-206ENST00000577779 NTRK3Q16288 839 aa15.52■□□□□ 0.08
PPP4R1-206ENST00000577779 CTXN3Q4LDR2 81 aa15.52■□□□□ 0.08
PPP4R1-206ENST00000577779 ZBTB8OSQ8IWT0 167 aa15.52■□□□□ 0.08
PPP4R1-206ENST00000577779 BRF1Q92994 677 aa15.52■□□□□ 0.08
PPP4R1-206ENST00000577779 LRRC3BQ96PB8 259 aa15.52■□□□□ 0.08
PPP4R1-206ENST00000577779 HHIPQ96QV1 700 aa15.52■□□□□ 0.08
PPP4R1-206ENST00000577779 FZD8Q9H461 694 aa15.52■□□□□ 0.08
PPP4R1-206ENST00000577779 POLR3BQ9NW08 1133 aaPredicted RBP15.52■□□□□ 0.08
PPP4R1-206ENST00000577779 AFF4Q9UHB7 1163 aaKnown RBP15.52■□□□□ 0.08
PPP4R1-206ENST00000577779 MAFFQ9ULX9 164 aa15.52■□□□□ 0.08
PPP4R1-206ENST00000577779 GPSM3Q9Y4H4 160 aa15.52■□□□□ 0.08
PPP4R1-206ENST00000577779 CFAP46Q8IYW2 2715 aa15.52■□□□□ 0.07
PPP4R1-206ENST00000577779 ACACAQ13085 2346 aa15.51■□□□□ 0.07
PPP4R1-206ENST00000577779 M0R2N6 131 aa15.51■□□□□ 0.07
PPP4R1-206ENST00000577779 CDX4O14627 284 aaPredicted RBP15.51■□□□□ 0.07
PPP4R1-206ENST00000577779 SYN3O14994 580 aa15.51■□□□□ 0.07
PPP4R1-206ENST00000577779 SLITRK3O94933 977 aa15.51■□□□□ 0.07
PPP4R1-206ENST00000577779 HMGB1P09429 215 aaKnown RBP15.51■□□□□ 0.07
PPP4R1-206ENST00000577779 IFNAR1P17181 557 aa15.51■□□□□ 0.07
PPP4R1-206ENST00000577779 GBP1P32455 592 aa15.51■□□□□ 0.07
PPP4R1-206ENST00000577779 PLCB2Q00722 1185 aa15.51■□□□□ 0.07
PPP4R1-206ENST00000577779 GRSF1Q12849 480 aaKnown RBP eCLIP15.51■□□□□ 0.07
PPP4R1-206ENST00000577779 FAM187BQ17R55 369 aa15.51■□□□□ 0.07
PPP4R1-206ENST00000577779 ITPRIPL2Q3MIP1 535 aa15.51■□□□□ 0.07
PPP4R1-206ENST00000577779 STXBP5Q5T5C0 1151 aa15.51■□□□□ 0.07
PPP4R1-206ENST00000577779 Q6ZUG5 572 aa15.51■□□□□ 0.07
PPP4R1-206ENST00000577779 PROSER1Q86XN7 944 aa15.51■□□□□ 0.07
PPP4R1-206ENST00000577779 RASEFQ8IZ41 740 aa15.51■□□□□ 0.07
PPP4R1-206ENST00000577779 ABCA7Q8IZY2 2146 aa15.51■□□□□ 0.07
PPP4R1-206ENST00000577779 SLC32A1Q9H598 525 aa15.51■□□□□ 0.07
PPP4R1-206ENST00000577779 ANKEF1Q9NU02 776 aa15.51■□□□□ 0.07
PPP4R1-206ENST00000577779 CPB1P15086 417 aa15.5■□□□□ 0.07
PPP4R1-206ENST00000577779 MRPL58Q14197 206 aaKnown RBP15.5■□□□□ 0.07
PPP4R1-206ENST00000577779 KRT32Q14532 448 aa15.5■□□□□ 0.07
PPP4R1-206ENST00000577779 PTPAQ15257 358 aa15.5■□□□□ 0.07
PPP4R1-206ENST00000577779 CDCA2Q69YH5 1023 aaPredicted RBP15.5■□□□□ 0.07
PPP4R1-206ENST00000577779 FSTL4Q6MZW2 842 aa15.5■□□□□ 0.07
PPP4R1-206ENST00000577779 MAEAQ7L5Y9 396 aa15.5■□□□□ 0.07
PPP4R1-206ENST00000577779 KRT25Q7Z3Z0 450 aa15.5■□□□□ 0.07
PPP4R1-206ENST00000577779 HAS1Q92839 578 aa15.5■□□□□ 0.07
PPP4R1-206ENST00000577779 GPRC5CQ9NQ84 441 aa15.5■□□□□ 0.07
PPP4R1-206ENST00000577779 ANKFY1Q9P2R3 1169 aa15.5■□□□□ 0.07
PPP4R1-206ENST00000577779 USP20Q9Y2K6 914 aa15.5■□□□□ 0.07
PPP4R1-206ENST00000577779 YIPF1Q9Y548 306 aa15.5■□□□□ 0.07
PPP4R1-206ENST00000577779 NUP210Q8TEM1 1887 aaPredicted RBP15.5■□□□□ 0.07
PPP4R1-206ENST00000577779 PATE3B3GLJ2 98 aa15.49■□□□□ 0.07
PPP4R1-206ENST00000577779 PODXLO00592 558 aa15.49■□□□□ 0.07
PPP4R1-206ENST00000577779 USO1O60763 962 aaKnown RBP15.49■□□□□ 0.07
PPP4R1-206ENST00000577779 RNF40O75150 1001 aa15.49■□□□□ 0.07
PPP4R1-206ENST00000577779 SEC24BO95487 1268 aa15.49■□□□□ 0.07
PPP4R1-206ENST00000577779 CPA1P15085 419 aa15.49■□□□□ 0.07
PPP4R1-206ENST00000577779 GCFC2P16383 781 aaKnown RBP15.49■□□□□ 0.07
PPP4R1-206ENST00000577779 LIG1P18858 919 aa15.49■□□□□ 0.07
PPP4R1-206ENST00000577779 SOX4Q06945 474 aaPredicted RBP15.49■□□□□ 0.07
PPP4R1-206ENST00000577779 MAPK6Q16659 721 aa15.49■□□□□ 0.07
PPP4R1-206ENST00000577779 DCAF4L1Q3SXM0 396 aa15.49■□□□□ 0.07
PPP4R1-206ENST00000577779 TSGA10IPQ3SY00 556 aa15.49■□□□□ 0.07
PPP4R1-206ENST00000577779 TMEM196Q5HYL7 178 aa15.49■□□□□ 0.07
PPP4R1-206ENST00000577779 EEF1DP3Q658K8 133 aa15.49■□□□□ 0.07
PPP4R1-206ENST00000577779 ZNF280DQ6N043 979 aa15.49■□□□□ 0.07
PPP4R1-206ENST00000577779 RNF19BQ6ZMZ0 732 aa15.49■□□□□ 0.07
PPP4R1-206ENST00000577779 TMC8Q8IU68 726 aa15.49■□□□□ 0.07
PPP4R1-206ENST00000577779 DAGLBQ8NCG7 672 aa15.49■□□□□ 0.07
PPP4R1-206ENST00000577779 EIF2AK1Q9BQI3 630 aaKnown RBP15.49■□□□□ 0.07
PPP4R1-206ENST00000577779 LRRC3Q9BY71 257 aa15.49■□□□□ 0.07
PPP4R1-206ENST00000577779 C2orf40Q9H1Z8 148 aa15.49■□□□□ 0.07
PPP4R1-206ENST00000577779 OBP2AQ9NY56 170 aa15.49■□□□□ 0.07
PPP4R1-206ENST00000577779 NUB1Q9Y5A7 615 aa15.49■□□□□ 0.07
PPP4R1-206ENST00000577779 APC2O95996 2303 aa15.49■□□□□ 0.07
PPP4R1-206ENST00000577779 THADAQ6YHU6 1953 aa15.48■□□□□ 0.07
PPP4R1-206ENST00000577779 SMIM28A0A1B0GU29 152 aa15.48■□□□□ 0.07
PPP4R1-206ENST00000577779 SPAARA0A1B0GVQ0 90 aa15.48■□□□□ 0.07
PPP4R1-206ENST00000577779 EIF4E1BA6NMX2 242 aaKnown RBP15.48■□□□□ 0.07
PPP4R1-206ENST00000577779 ACKR2O00590 384 aa15.48■□□□□ 0.07
PPP4R1-206ENST00000577779 CCNT1O60563 726 aaKnown RBP15.48■□□□□ 0.07
PPP4R1-206ENST00000577779 LYPLA2O95372 231 aa15.48■□□□□ 0.07
PPP4R1-206ENST00000577779 APBB3O95704 486 aa15.48■□□□□ 0.07
PPP4R1-206ENST00000577779 RARRES1P49788 294 aa15.48■□□□□ 0.07
PPP4R1-206ENST00000577779 EPHB3P54753 998 aa15.48■□□□□ 0.07
PPP4R1-206ENST00000577779 SIM1P81133 766 aaPredicted RBP15.48■□□□□ 0.07
PPP4R1-206ENST00000577779 PLD1Q13393 1074 aa15.48■□□□□ 0.07
PPP4R1-206ENST00000577779 COL28A1Q2UY09 1125 aa15.48■□□□□ 0.07
PPP4R1-206ENST00000577779 CYP2U1Q7Z449 544 aa15.48■□□□□ 0.07
PPP4R1-206ENST00000577779 NEK8Q86SG6 692 aa15.48■□□□□ 0.07
PPP4R1-206ENST00000577779 TRIM22Q8IYM9 498 aa15.48■□□□□ 0.07
PPP4R1-206ENST00000577779 BPIFB1Q8TDL5 484 aa15.48■□□□□ 0.07
PPP4R1-206ENST00000577779 MKNK1Q9BUB5 465 aa15.48■□□□□ 0.07
PPP4R1-206ENST00000577779 NCOA5Q9HCD5 579 aaKnown RBP15.48■□□□□ 0.07
PPP4R1-206ENST00000577779 THG1LQ9NWX6 298 aaKnown RBP15.48■□□□□ 0.07
PPP4R1-206ENST00000577779 TPCN1Q9ULQ1 816 aa15.48■□□□□ 0.07
PPP4R1-206ENST00000577779 CCDC194A0A1B0GVG4 234 aa15.47■□□□□ 0.07
PPP4R1-206ENST00000577779 MEFVO15553 781 aaPredicted RBP15.47■□□□□ 0.07
PPP4R1-206ENST00000577779 PRAMEF12O95522 483 aa15.47■□□□□ 0.07
PPP4R1-206ENST00000577779 EGFP01133 1207 aa15.47■□□□□ 0.07
PPP4R1-206ENST00000577779 RDXP35241 583 aaKnown RBP15.47■□□□□ 0.07
PPP4R1-206ENST00000577779 IRX4P78413 519 aa15.47■□□□□ 0.07
PPP4R1-206ENST00000577779 NPY5RQ15761 445 aa15.47■□□□□ 0.07
PPP4R1-206ENST00000577779 ARHGAP15Q53QZ3 475 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms