RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 MYO1EQ12965 1108 aa13.71□□□□□ -0.21
CDK5RAP3-203ENST00000577442 PUS10Q3MIT2 529 aaKnown RBP13.71□□□□□ -0.21
CDK5RAP3-203ENST00000577442 VARS2Q5ST30 1063 aaKnown RBP13.71□□□□□ -0.21
CDK5RAP3-203ENST00000577442 LMBRD2Q68DH5 695 aaPredicted RBP13.71□□□□□ -0.21
CDK5RAP3-203ENST00000577442 ISM2Q6H9L7 571 aa13.71□□□□□ -0.21
CDK5RAP3-203ENST00000577442 PRSS55Q6UWB4 352 aaPredicted RBP13.71□□□□□ -0.21
CDK5RAP3-203ENST00000577442 TMEM184AQ6ZMB5 413 aa13.71□□□□□ -0.21
CDK5RAP3-203ENST00000577442 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.71□□□□□ -0.21
CDK5RAP3-203ENST00000577442 FAM186BQ8IYM0 893 aa13.71□□□□□ -0.21
CDK5RAP3-203ENST00000577442 CSGALNACT2Q8N6G5 542 aa13.71□□□□□ -0.21
CDK5RAP3-203ENST00000577442 LNX1Q8TBB1 728 aaPredicted RBP13.71□□□□□ -0.21
CDK5RAP3-203ENST00000577442 TMC2Q8TDI7 906 aa13.71□□□□□ -0.21
CDK5RAP3-203ENST00000577442 PARD3BQ8TEW8 1205 aa13.71□□□□□ -0.21
CDK5RAP3-203ENST00000577442 SENP8Q96LD8 212 aa13.71□□□□□ -0.21
CDK5RAP3-203ENST00000577442 OXCT2Q9BYC2 517 aaPredicted RBP13.71□□□□□ -0.21
CDK5RAP3-203ENST00000577442 PRDM6Q9NQX0 595 aa13.71□□□□□ -0.21
CDK5RAP3-203ENST00000577442 MTRRQ9UBK8 725 aa13.71□□□□□ -0.21
CDK5RAP3-203ENST00000577442 DSEQ9UL01 958 aa13.71□□□□□ -0.21
CDK5RAP3-203ENST00000577442 AGAP1Q9UPQ3 857 aa13.71□□□□□ -0.21
CDK5RAP3-203ENST00000577442 FAM50BQ9Y247 325 aa13.71□□□□□ -0.21
CDK5RAP3-203ENST00000577442 BACE2Q9Y5Z0 518 aa13.71□□□□□ -0.21
CDK5RAP3-203ENST00000577442 SPTBN5Q9NRC6 3674 aaKnown RBP13.7□□□□□ -0.22
CDK5RAP3-203ENST00000577442 MTCL1Q9Y4B5 1905 aaKnown RBP13.7□□□□□ -0.22
CDK5RAP3-203ENST00000577442 SPDYE4A6NLX3 237 aa13.7□□□□□ -0.22
CDK5RAP3-203ENST00000577442 LINC01565O15544 149 aa13.7□□□□□ -0.22
CDK5RAP3-203ENST00000577442 TBX10O75333 385 aa13.7□□□□□ -0.22
CDK5RAP3-203ENST00000577442 GLP2RO95838 553 aa13.7□□□□□ -0.22
CDK5RAP3-203ENST00000577442 PTMSP20962 102 aa13.7□□□□□ -0.22
CDK5RAP3-203ENST00000577442 IGFBP6P24592 240 aaPredicted RBP13.7□□□□□ -0.22
CDK5RAP3-203ENST00000577442 PAK1Q13153 545 aa13.7□□□□□ -0.22
CDK5RAP3-203ENST00000577442 LEXMQ3ZCV2 418 aa13.7□□□□□ -0.22
CDK5RAP3-203ENST00000577442 KLHL10Q6JEL2 608 aa13.7□□□□□ -0.22
CDK5RAP3-203ENST00000577442 LLGL2Q6P1M3 1020 aa13.7□□□□□ -0.22
CDK5RAP3-203ENST00000577442 OR5B17Q8NGF7 314 aa13.7□□□□□ -0.22
CDK5RAP3-203ENST00000577442 NELFBQ8WX92 580 aa13.7□□□□□ -0.22
CDK5RAP3-203ENST00000577442 CD207Q9UJ71 328 aa13.7□□□□□ -0.22
CDK5RAP3-203ENST00000577442 BARX2Q9UMQ3 279 aaPredicted RBP13.7□□□□□ -0.22
CDK5RAP3-203ENST00000577442 TSC2P49815 1807 aa13.69□□□□□ -0.22
CDK5RAP3-203ENST00000577442 PTPRJQ12913 1337 aa13.69□□□□□ -0.22
CDK5RAP3-203ENST00000577442 KPNA7A9QM74 516 aa13.69□□□□□ -0.22
CDK5RAP3-203ENST00000577442 PPP1R3GB7ZBB8 358 aa13.69□□□□□ -0.22
CDK5RAP3-203ENST00000577442 IKBKBO14920 756 aa13.69□□□□□ -0.22
CDK5RAP3-203ENST00000577442 PHACTR2O75167 634 aa13.69□□□□□ -0.22
CDK5RAP3-203ENST00000577442 AKAP3O75969 853 aa13.69□□□□□ -0.22
CDK5RAP3-203ENST00000577442 CD44P16070 742 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-203ENST00000577442 EPCAMP16422 314 aa13.69□□□□□ -0.22
CDK5RAP3-203ENST00000577442 BMP6P22004 513 aa13.69□□□□□ -0.22
CDK5RAP3-203ENST00000577442 LTBRP36941 435 aa13.69□□□□□ -0.22
CDK5RAP3-203ENST00000577442 CLCN4P51793 760 aa13.69□□□□□ -0.22
CDK5RAP3-203ENST00000577442 VAMP7P51809 220 aa13.69□□□□□ -0.22
CDK5RAP3-203ENST00000577442 CLDN10P78369 228 aa13.69□□□□□ -0.22
CDK5RAP3-203ENST00000577442 YWHAHQ04917 246 aaPredicted RBP13.69□□□□□ -0.22
CDK5RAP3-203ENST00000577442 BFSP1Q12934 665 aa13.69□□□□□ -0.22
CDK5RAP3-203ENST00000577442 SMAD4Q13485 552 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-203ENST00000577442 BIRC3Q13489 604 aa13.69□□□□□ -0.22
CDK5RAP3-203ENST00000577442 TRPC3Q13507 836 aa13.69□□□□□ -0.22
CDK5RAP3-203ENST00000577442 KCNC3Q14003 757 aa13.69□□□□□ -0.22
CDK5RAP3-203ENST00000577442 CTXN3Q4LDR2 81 aa13.69□□□□□ -0.22
CDK5RAP3-203ENST00000577442 ANKRD54Q6NXT1 300 aa13.69□□□□□ -0.22
CDK5RAP3-203ENST00000577442 TRAPPC11Q7Z392 1133 aa13.69□□□□□ -0.22
CDK5RAP3-203ENST00000577442 METTL23Q86XA0 190 aa13.69□□□□□ -0.22
CDK5RAP3-203ENST00000577442 ZC3H3Q8IXZ2 948 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-203ENST00000577442 TMEM130Q8N3G9 435 aa13.69□□□□□ -0.22
CDK5RAP3-203ENST00000577442 MLKLQ8NB16 471 aa13.69□□□□□ -0.22
CDK5RAP3-203ENST00000577442 VN1R2Q8NFZ6 395 aa13.69□□□□□ -0.22
CDK5RAP3-203ENST00000577442 GPT2Q8TD30 523 aa13.69□□□□□ -0.22
CDK5RAP3-203ENST00000577442 SLC22A17Q8WUG5 538 aa13.69□□□□□ -0.22
CDK5RAP3-203ENST00000577442 HDAC7Q8WUI4 952 aa13.69□□□□□ -0.22
CDK5RAP3-203ENST00000577442 CEP63Q96MT8 703 aa13.69□□□□□ -0.22
CDK5RAP3-203ENST00000577442 PLEKHA4Q9H4M7 779 aa13.69□□□□□ -0.22
CDK5RAP3-203ENST00000577442 DACH1Q9UI36 760 aa13.69□□□□□ -0.22
CDK5RAP3-203ENST00000577442 SIX4Q9UIU6 781 aa13.69□□□□□ -0.22
CDK5RAP3-203ENST00000577442 CTNND2Q9UQB3 1225 aa13.69□□□□□ -0.22
CDK5RAP3-203ENST00000577442 PLXNA3P51805 1871 aa13.69□□□□□ -0.22
CDK5RAP3-203ENST00000577442 TRIM49BA6NDI0 452 aa13.68□□□□□ -0.22
CDK5RAP3-203ENST00000577442 OR6C75A6NL08 312 aa13.68□□□□□ -0.22
CDK5RAP3-203ENST00000577442 LRRIQ3A6PVS8 624 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP3-203ENST00000577442 H3BQ06 376 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP3-203ENST00000577442 CYB561D2O14569 222 aa13.68□□□□□ -0.22
CDK5RAP3-203ENST00000577442 SPTLC1O15269 473 aa13.68□□□□□ -0.22
CDK5RAP3-203ENST00000577442 STX10O60499 249 aa13.68□□□□□ -0.22
CDK5RAP3-203ENST00000577442 HUS1O60921 280 aa13.68□□□□□ -0.22
CDK5RAP3-203ENST00000577442 OAZ2O95190 189 aa13.68□□□□□ -0.22
CDK5RAP3-203ENST00000577442 CYP11A1P05108 521 aa13.68□□□□□ -0.22
CDK5RAP3-203ENST00000577442 RPL17P18621 184 aaKnown RBP13.68□□□□□ -0.22
CDK5RAP3-203ENST00000577442 TFF2Q03403 129 aa13.68□□□□□ -0.22
CDK5RAP3-203ENST00000577442 RAB33AQ14088 237 aa13.68□□□□□ -0.22
CDK5RAP3-203ENST00000577442 MRPL58Q14197 206 aaKnown RBP13.68□□□□□ -0.22
CDK5RAP3-203ENST00000577442 LIN9Q5TKA1 542 aa13.68□□□□□ -0.22
CDK5RAP3-203ENST00000577442 ANKRD40Q6AI12 368 aa13.68□□□□□ -0.22
CDK5RAP3-203ENST00000577442 OVOS1Q6IE37 1185 aa13.68□□□□□ -0.22
CDK5RAP3-203ENST00000577442 SLC8B1Q6J4K2 584 aa13.68□□□□□ -0.22
CDK5RAP3-203ENST00000577442 CXorf38Q8TB03 319 aa13.68□□□□□ -0.22
CDK5RAP3-203ENST00000577442 SPATA18Q8TC71 538 aa13.68□□□□□ -0.22
CDK5RAP3-203ENST00000577442 HPDLQ96IR7 371 aa13.68□□□□□ -0.22
CDK5RAP3-203ENST00000577442 MSLNLQ96KJ4 702 aa13.68□□□□□ -0.22
CDK5RAP3-203ENST00000577442 POP1Q99575 1024 aaKnown RBP13.68□□□□□ -0.22
CDK5RAP3-203ENST00000577442 CLSTN3Q9BQT9 956 aa13.68□□□□□ -0.22
CDK5RAP3-203ENST00000577442 GZF1Q9H116 711 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP3-203ENST00000577442 SFXN1Q9H9B4 322 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms