RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 KCNMA1Q12791 1236 aa9.18□□□□□ -0.94
PRPF8-213ENST00000576407 MYO1EQ12965 1108 aa9.18□□□□□ -0.94
PRPF8-213ENST00000576407 NR1I3Q14994 352 aa9.18□□□□□ -0.94
PRPF8-213ENST00000576407 RAB30Q15771 203 aa9.18□□□□□ -0.94
PRPF8-213ENST00000576407 PTPN21Q16825 1174 aa9.18□□□□□ -0.94
PRPF8-213ENST00000576407 EXOC3L4Q17RC7 722 aa9.18□□□□□ -0.94
PRPF8-213ENST00000576407 ZNF699Q32M78 642 aa9.18□□□□□ -0.94
PRPF8-213ENST00000576407 TRIM65Q6PJ69 517 aa9.18□□□□□ -0.94
PRPF8-213ENST00000576407 CD300LGQ6UXG3 332 aa9.18□□□□□ -0.94
PRPF8-213ENST00000576407 GBP6Q6ZN66 633 aa9.18□□□□□ -0.94
PRPF8-213ENST00000576407 TMEM173Q86WV6 379 aaPredicted RBP9.18□□□□□ -0.94
PRPF8-213ENST00000576407 LRRC52Q8N7C0 313 aa9.18□□□□□ -0.94
PRPF8-213ENST00000576407 COLGALT1Q8NBJ5 622 aa9.18□□□□□ -0.94
PRPF8-213ENST00000576407 EHBP1Q8NDI1 1231 aa9.18□□□□□ -0.94
PRPF8-213ENST00000576407 LMO3Q8TAP4 145 aa9.18□□□□□ -0.94
PRPF8-213ENST00000576407 BCL7CQ8WUZ0 217 aaPredicted RBP9.18□□□□□ -0.94
PRPF8-213ENST00000576407 TAF4BQ92750 862 aa9.18□□□□□ -0.94
PRPF8-213ENST00000576407 HPDLQ96IR7 371 aa9.18□□□□□ -0.94
PRPF8-213ENST00000576407 PDLIM2Q96JY6 352 aa9.18□□□□□ -0.94
PRPF8-213ENST00000576407 ZNF560Q96MR9 790 aa9.18□□□□□ -0.94
PRPF8-213ENST00000576407 ZNF558Q96NG5 402 aa9.18□□□□□ -0.94
PRPF8-213ENST00000576407 COLEC11Q9BWP8 271 aa9.18□□□□□ -0.94
PRPF8-213ENST00000576407 KIAA1671Q9BY89 1806 aa9.18□□□□□ -0.94
PRPF8-213ENST00000576407 XPO4Q9C0E2 1151 aaKnown RBP9.18□□□□□ -0.94
PRPF8-213ENST00000576407 INTS2Q9H0H0 1204 aaKnown RBP9.18□□□□□ -0.94
PRPF8-213ENST00000576407 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.18□□□□□ -0.94
PRPF8-213ENST00000576407 AAASQ9NRG9 546 aa9.18□□□□□ -0.94
PRPF8-213ENST00000576407 MARCH5Q9NX47 278 aa9.18□□□□□ -0.94
PRPF8-213ENST00000576407 GCNT4Q9P109 453 aa9.18□□□□□ -0.94
PRPF8-213ENST00000576407 MSRAQ9UJ68 235 aa9.18□□□□□ -0.94
PRPF8-213ENST00000576407 ADAM28Q9UKQ2 775 aa9.18□□□□□ -0.94
PRPF8-213ENST00000576407 COLQQ9Y215 455 aaPredicted RBP9.18□□□□□ -0.94
PRPF8-213ENST00000576407 NUB1Q9Y5A7 615 aa9.18□□□□□ -0.94
PRPF8-213ENST00000576407 A0A1W2PPC1 479 aa9.17□□□□□ -0.94
PRPF8-213ENST00000576407 CARNS1A5YM72 827 aa9.17□□□□□ -0.94
PRPF8-213ENST00000576407 KPNA7A9QM74 516 aa9.17□□□□□ -0.94
PRPF8-213ENST00000576407 I3L4J1 428 aa9.17□□□□□ -0.94
PRPF8-213ENST00000576407 CBFA2T2O43439 604 aa9.17□□□□□ -0.94
PRPF8-213ENST00000576407 TADA2AO75478 443 aa9.17□□□□□ -0.94
PRPF8-213ENST00000576407 CLSTN1O94985 981 aa9.17□□□□□ -0.94
PRPF8-213ENST00000576407 PON1P27169 355 aa9.17□□□□□ -0.94
PRPF8-213ENST00000576407 BMPR1AP36894 532 aa9.17□□□□□ -0.94
PRPF8-213ENST00000576407 BRCC3P46736 316 aa9.17□□□□□ -0.94
PRPF8-213ENST00000576407 AARSP49588 968 aaKnown RBP eCLIP9.17□□□□□ -0.94
PRPF8-213ENST00000576407 KLK7P49862 253 aa9.17□□□□□ -0.94
PRPF8-213ENST00000576407 NOP14P78316 857 aaKnown RBP9.17□□□□□ -0.94
PRPF8-213ENST00000576407 SMAD3P84022 425 aaKnown RBP9.17□□□□□ -0.94
PRPF8-213ENST00000576407 APBA1Q02410 837 aa9.17□□□□□ -0.94
PRPF8-213ENST00000576407 TAP1Q03518 808 aa9.17□□□□□ -0.94
PRPF8-213ENST00000576407 LRMPQ12912 555 aa9.17□□□□□ -0.94
PRPF8-213ENST00000576407 SYCP1Q15431 976 aa9.17□□□□□ -0.94
PRPF8-213ENST00000576407 WDR72Q3MJ13 1102 aa9.17□□□□□ -0.94
PRPF8-213ENST00000576407 SV2CQ496J9 727 aa9.17□□□□□ -0.94
PRPF8-213ENST00000576407 TIGD5Q53EQ6 642 aa9.17□□□□□ -0.94
PRPF8-213ENST00000576407 ZNF667Q5HYK9 610 aa9.17□□□□□ -0.94
PRPF8-213ENST00000576407 WDR44Q5JSH3 913 aa9.17□□□□□ -0.94
PRPF8-213ENST00000576407 HABP4Q5JVS0 413 aaKnown RBP9.17□□□□□ -0.94
PRPF8-213ENST00000576407 SPOPLQ6IQ16 392 aa9.17□□□□□ -0.94
PRPF8-213ENST00000576407 SPRED2Q7Z698 418 aa9.17□□□□□ -0.94
PRPF8-213ENST00000576407 SLC39A11Q8N1S5 342 aa9.17□□□□□ -0.94
PRPF8-213ENST00000576407 CCDC150Q8NCX0 1101 aa9.17□□□□□ -0.94
PRPF8-213ENST00000576407 TATDN2Q93075 761 aa9.17□□□□□ -0.94
PRPF8-213ENST00000576407 IGSF21Q96ID5 467 aa9.17□□□□□ -0.94
PRPF8-213ENST00000576407 ERGIC2Q96RQ1 377 aa9.17□□□□□ -0.94
PRPF8-213ENST00000576407 C17orf80Q9BSJ5 609 aa9.17□□□□□ -0.94
PRPF8-213ENST00000576407 IMPG2Q9BZV3 1241 aa9.17□□□□□ -0.94
PRPF8-213ENST00000576407 TRIM5Q9C035 493 aa9.17□□□□□ -0.94
PRPF8-213ENST00000576407 NKX2-4Q9H2Z4 354 aa9.17□□□□□ -0.94
PRPF8-213ENST00000576407 VRTNQ9H8Y1 702 aa9.17□□□□□ -0.94
PRPF8-213ENST00000576407 APOBEC3GQ9HC16 384 aaKnown RBP9.17□□□□□ -0.94
PRPF8-213ENST00000576407 SPG21Q9NZD8 308 aa9.17□□□□□ -0.94
PRPF8-213ENST00000576407 SIK3Q9Y2K2 1263 aa9.17□□□□□ -0.94
PRPF8-213ENST00000576407 RWDD3Q9Y3V2 267 aa9.17□□□□□ -0.94
PRPF8-213ENST00000576407 PCDHB12Q9Y5F1 795 aa9.17□□□□□ -0.94
PRPF8-213ENST00000576407 SCN1AP35498 2009 aa9.16□□□□□ -0.94
PRPF8-213ENST00000576407 LAMA3Q16787 3333 aa9.16□□□□□ -0.94
PRPF8-213ENST00000576407 A0A1W2PQC6 194 aa9.16□□□□□ -0.94
PRPF8-213ENST00000576407 M0QZQ0 153 aa9.16□□□□□ -0.94
PRPF8-213ENST00000576407 FGF18O76093 207 aa9.16□□□□□ -0.94
PRPF8-213ENST00000576407 EFEMP2O95967 443 aa9.16□□□□□ -0.94
PRPF8-213ENST00000576407 TPM3P06753 285 aa9.16□□□□□ -0.94
PRPF8-213ENST00000576407 PAX3P23760 479 aa9.16□□□□□ -0.94
PRPF8-213ENST00000576407 DNAJB2P25686 324 aa9.16□□□□□ -0.94
PRPF8-213ENST00000576407 CTNNB1P35222 781 aa9.16□□□□□ -0.94
PRPF8-213ENST00000576407 PPM1AP35813 382 aa9.16□□□□□ -0.94
PRPF8-213ENST00000576407 PBX1P40424 430 aa9.16□□□□□ -0.94
PRPF8-213ENST00000576407 LRIT3Q3SXY7 679 aa9.16□□□□□ -0.94
PRPF8-213ENST00000576407 PPP2R2DQ66LE6 453 aa9.16□□□□□ -0.94
PRPF8-213ENST00000576407 PHLDB3Q6NSJ2 640 aa9.16□□□□□ -0.94
PRPF8-213ENST00000576407 DPY19L2P1Q6NXN4 242 aa9.16□□□□□ -0.94
PRPF8-213ENST00000576407 DSTYKQ6XUX3 929 aa9.16□□□□□ -0.94
PRPF8-213ENST00000576407 KLHL23Q8NBE8 558 aa9.16□□□□□ -0.94
PRPF8-213ENST00000576407 TMEM169Q96HH4 297 aa9.16□□□□□ -0.94
PRPF8-213ENST00000576407 SUSD3Q96L08 255 aa9.16□□□□□ -0.94
PRPF8-213ENST00000576407 SENP8Q96LD8 212 aa9.16□□□□□ -0.94
PRPF8-213ENST00000576407 NT5C1BQ96P26 610 aa9.16□□□□□ -0.94
PRPF8-213ENST00000576407 TGS1Q96RS0 853 aaKnown RBP9.16□□□□□ -0.94
PRPF8-213ENST00000576407 LSM14BQ9BX40 385 aaKnown RBP9.16□□□□□ -0.94
PRPF8-213ENST00000576407 GPR62Q9BZJ7 368 aa9.16□□□□□ -0.94
PRPF8-213ENST00000576407 SLC28A3Q9HAS3 691 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms