RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 DMAC2Q9NW81 257 aa14.68□□□□□ -0.06
CIITA-210ENST00000575513 RMND1Q9NWS8 449 aa14.68□□□□□ -0.06
CIITA-210ENST00000575513 FBXW11Q9UKB1 542 aa14.68□□□□□ -0.06
CIITA-210ENST00000575513 ITGA11Q9UKX5 1188 aa14.68□□□□□ -0.06
CIITA-210ENST00000575513 DSEQ9UL01 958 aa14.68□□□□□ -0.06
CIITA-210ENST00000575513 CDY1Q9Y6F8 540 aa14.68□□□□□ -0.06
CIITA-210ENST00000575513 SPDYE4A6NLX3 237 aa14.67□□□□□ -0.06
CIITA-210ENST00000575513 LOC730098B7Z3J9 87 aa14.67□□□□□ -0.06
CIITA-210ENST00000575513 CLIC2O15247 247 aa14.67□□□□□ -0.06
CIITA-210ENST00000575513 ZMYND10O75800 440 aa14.67□□□□□ -0.06
CIITA-210ENST00000575513 ABLIM3O94929 683 aa14.67□□□□□ -0.06
CIITA-210ENST00000575513 SMC2O95347 1197 aa14.67□□□□□ -0.06
CIITA-210ENST00000575513 CYP11A1P05108 521 aa14.67□□□□□ -0.06
CIITA-210ENST00000575513 POU2F2P09086 479 aa14.67□□□□□ -0.06
CIITA-210ENST00000575513 HNRNPA1P09651 372 aaKnown RBP eCLIP14.67□□□□□ -0.06
CIITA-210ENST00000575513 HOXA9P31269 272 aa14.67□□□□□ -0.06
CIITA-210ENST00000575513 TAF6P49848 677 aa14.67□□□□□ -0.06
CIITA-210ENST00000575513 GUCY2FP51841 1108 aa14.67□□□□□ -0.06
CIITA-210ENST00000575513 TFAMQ00059 246 aaKnown RBP14.67□□□□□ -0.06
CIITA-210ENST00000575513 YWHAHQ04917 246 aaPredicted RBP14.67□□□□□ -0.06
CIITA-210ENST00000575513 NFIL3Q16649 462 aa14.67□□□□□ -0.06
CIITA-210ENST00000575513 DUOXA2Q1HG44 320 aa14.67□□□□□ -0.06
CIITA-210ENST00000575513 TPGS2Q68CL5 300 aa14.67□□□□□ -0.06
CIITA-210ENST00000575513 ZNF280DQ6N043 979 aa14.67□□□□□ -0.06
CIITA-210ENST00000575513 DSTYKQ6XUX3 929 aa14.67□□□□□ -0.06
CIITA-210ENST00000575513 WDR49Q8IV35 697 aa14.67□□□□□ -0.06
CIITA-210ENST00000575513 LRRC52Q8N7C0 313 aa14.67□□□□□ -0.06
CIITA-210ENST00000575513 C12orf76Q8N812 135 aaPredicted RBP14.67□□□□□ -0.06
CIITA-210ENST00000575513 SENP8Q96LD8 212 aa14.67□□□□□ -0.06
CIITA-210ENST00000575513 MFSD14AQ96MC6 490 aa14.67□□□□□ -0.06
CIITA-210ENST00000575513 INTS13Q9NVM9 706 aa14.67□□□□□ -0.06
CIITA-210ENST00000575513 TRAF3IP3Q9Y228 551 aa14.67□□□□□ -0.06
CIITA-210ENST00000575513 USTQ9Y2C2 406 aa14.67□□□□□ -0.06
CIITA-210ENST00000575513 CCDC195A0A1B0GUA6 201 aa14.66□□□□□ -0.06
CIITA-210ENST00000575513 PPEF2O14830 753 aa14.66□□□□□ -0.06
CIITA-210ENST00000575513 ADAM12O43184 909 aa14.66□□□□□ -0.06
CIITA-210ENST00000575513 EXOC3O60645 756 aa14.66□□□□□ -0.06
CIITA-210ENST00000575513 ODC1P11926 461 aa14.66□□□□□ -0.06
CIITA-210ENST00000575513 CYP2J2P51589 502 aa14.66□□□□□ -0.06
CIITA-210ENST00000575513 WNT7BP56706 349 aa14.66□□□□□ -0.06
CIITA-210ENST00000575513 UBE2HP62256 183 aa14.66□□□□□ -0.06
CIITA-210ENST00000575513 RBP5P82980 135 aa14.66□□□□□ -0.06
CIITA-210ENST00000575513 CYP24A1Q07973 514 aa14.66□□□□□ -0.06
CIITA-210ENST00000575513 PNOCQ13519 176 aa14.66□□□□□ -0.06
CIITA-210ENST00000575513 PSMD6Q15008 389 aa14.66□□□□□ -0.06
CIITA-210ENST00000575513 SV2CQ496J9 727 aa14.66□□□□□ -0.06
CIITA-210ENST00000575513 CTXN3Q4LDR2 81 aa14.66□□□□□ -0.06
CIITA-210ENST00000575513 COBLL1Q53SF7 1204 aa14.66□□□□□ -0.06
CIITA-210ENST00000575513 RSPO2Q6UXX9 243 aaPredicted RBP14.66□□□□□ -0.06
CIITA-210ENST00000575513 TMC5Q6UXY8 1006 aa14.66□□□□□ -0.06
CIITA-210ENST00000575513 CCDC149Q6ZUS6 474 aa14.66□□□□□ -0.06
CIITA-210ENST00000575513 USP37Q86T82 979 aa14.66□□□□□ -0.06
CIITA-210ENST00000575513 GLYCTKQ8IVS8 523 aa14.66□□□□□ -0.06
CIITA-210ENST00000575513 C1orf127Q8N9H9 656 aa14.66□□□□□ -0.06
CIITA-210ENST00000575513 CXorf38Q8TB03 319 aa14.66□□□□□ -0.06
CIITA-210ENST00000575513 BORCS6Q96GS4 357 aa14.66□□□□□ -0.06
CIITA-210ENST00000575513 ANKRD36BP1Q96IX9 119 aa14.66□□□□□ -0.06
CIITA-210ENST00000575513 ZNF560Q96MR9 790 aa14.66□□□□□ -0.06
CIITA-210ENST00000575513 APOL5Q9BWW9 433 aa14.66□□□□□ -0.06
CIITA-210ENST00000575513 PRKD2Q9BZL6 878 aa14.66□□□□□ -0.06
CIITA-210ENST00000575513 FBXL5Q9UKA1 691 aa14.66□□□□□ -0.06
CIITA-210ENST00000575513 NR2E1Q9Y466 385 aa14.66□□□□□ -0.06
CIITA-210ENST00000575513 PDCD11Q14690 1871 aaKnown RBP14.65□□□□□ -0.06
CIITA-210ENST00000575513 OR6C75A6NL08 312 aa14.65□□□□□ -0.06
CIITA-210ENST00000575513 KPNA7A9QM74 516 aa14.65□□□□□ -0.06
CIITA-210ENST00000575513 MAPK13O15264 365 aa14.65□□□□□ -0.06
CIITA-210ENST00000575513 SPTLC1O15269 473 aa14.65□□□□□ -0.06
CIITA-210ENST00000575513 CALUO43852 315 aaPredicted RBP14.65□□□□□ -0.06
CIITA-210ENST00000575513 KINO60870 393 aaKnown RBP14.65□□□□□ -0.06
CIITA-210ENST00000575513 GADD45BO75293 160 aaPredicted RBP14.65□□□□□ -0.06
CIITA-210ENST00000575513 TNNC2P02585 160 aa14.65□□□□□ -0.06
CIITA-210ENST00000575513 TMEM191BP0C7N4 346 aa14.65□□□□□ -0.06
CIITA-210ENST00000575513 SPATA31D3P0C874 917 aa14.65□□□□□ -0.06
CIITA-210ENST00000575513 ATF2P15336 505 aa14.65□□□□□ -0.06
CIITA-210ENST00000575513 SSTR3P32745 418 aaPredicted RBP14.65□□□□□ -0.06
CIITA-210ENST00000575513 AP3M2P53677 418 aa14.65□□□□□ -0.06
CIITA-210ENST00000575513 CLDN10P78369 228 aa14.65□□□□□ -0.06
CIITA-210ENST00000575513 ROR1Q01973 937 aa14.65□□□□□ -0.06
CIITA-210ENST00000575513 LIN9Q5TKA1 542 aa14.65□□□□□ -0.06
CIITA-210ENST00000575513 SPATA31D4Q6ZUB0 917 aa14.65□□□□□ -0.06
CIITA-210ENST00000575513 TCEAL8Q8IYN2 117 aa14.65□□□□□ -0.06
CIITA-210ENST00000575513 TMEM130Q8N3G9 435 aa14.65□□□□□ -0.06
CIITA-210ENST00000575513 CSGALNACT2Q8N6G5 542 aa14.65□□□□□ -0.06
CIITA-210ENST00000575513 RDH13Q8NBN7 331 aa14.65□□□□□ -0.06
CIITA-210ENST00000575513 SPATA18Q8TC71 538 aa14.65□□□□□ -0.06
CIITA-210ENST00000575513 NOC3LQ8WTT2 800 aaKnown RBP14.65□□□□□ -0.06
CIITA-210ENST00000575513 GBP4Q96PP9 640 aa14.65□□□□□ -0.06
CIITA-210ENST00000575513 FNBP1Q96RU3 617 aa14.65□□□□□ -0.06
CIITA-210ENST00000575513 CD320Q9NPF0 282 aa14.65□□□□□ -0.06
CIITA-210ENST00000575513 GDAP2Q9NXN4 497 aa14.65□□□□□ -0.06
CIITA-210ENST00000575513 TCF20Q9UGU0 1960 aaKnown RBP14.65□□□□□ -0.06
CIITA-210ENST00000575513 CYB561D2O14569 222 aa14.64□□□□□ -0.07
CIITA-210ENST00000575513 RFPL2O75678 378 aa14.64□□□□□ -0.07
CIITA-210ENST00000575513 NR3C1P04150 777 aa14.64□□□□□ -0.07
CIITA-210ENST00000575513 ITGB3P05106 788 aa14.64□□□□□ -0.07
CIITA-210ENST00000575513 RPL13P26373 211 aaKnown RBP14.64□□□□□ -0.07
CIITA-210ENST00000575513 POLR2BP30876 1174 aaKnown RBP14.64□□□□□ -0.07
CIITA-210ENST00000575513 ENPEPQ07075 957 aa14.64□□□□□ -0.07
CIITA-210ENST00000575513 MYO1EQ12965 1108 aa14.64□□□□□ -0.07
CIITA-210ENST00000575513 ZNF658Q5TYW1 1059 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms